Xiphophorus maculatus (southern platyfish): 102227333
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Entry
102227333 CDS
T02923
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
102227333 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xma03400
]
102227333 (xrcc5)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
102227333 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
Motif
Other DBs
NCBI-GeneID:
102227333
NCBI-ProteinID:
XP_023192670
Ensembl:
ENSXMAG00000015625
UniProt:
M4AMH6
LinkDB
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Position
7:complement(19227783..19238952)
Genome browser
AA seq
722 aa
AA seq
DB search
MAGAKSALVLCMDVGFSMSNSAPGEEPPFAQAKKVIQKFVQRQVFAETKDELALVLFGTD
STKNSLDQDGQYQNITVHRHLMVPDFELLEEIEHQIHPENQQADWLDALVVSMDLLQTET
KGKKCDRLNIVLLTDLNTEASSDKLDVIIENLKQAGITLQFFLPFPVEDEEEGEGDEDRT
GSGDPGRGKGLSREQRTGLEMVKNIMLSLEEEEGLEEIYTFRNAVEQLCMFKRIERRPMA
WPCQLTIGSSLSIRIVGYKAVTEEKLKKMWITVDAQTNQRDDVKRETVFCLDDDNETEVQ
KEDIIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFTKKNLVLRHQFMGTQIVKIFP
ARDDEHAGVAMSALIRGLDELNMVAIVRYAYDRRSNPQVGAAFPCIKPDYECLLYVQLPF
MEDLYGRQFTFPSLENNKKIAPSETQLSAIDSLIDSMMLVTEDEDLLKPHHLPNPAFQRH
FQCLHHRAVHADSPLPPMEPWLEAALDRPEVIQERCQAPLQEIKKLFPLTEVEKKKKLKT
SAQIFGKDSEEPDAKKAKEDEEEDEYNLANIAEGSVTSVGSVDPARDFRALIKQKTLSFG
EVCQQLTHRIEQLLSNKNTHYYMKSITCIQAFREQSVKQGNADLFNSYLQSLKRSIPSRG
LEVFWDLLVQDAVTLISKDEVEGSAVSKSEASQFLLAEEKKEQVAPEPVEDTGDVDDLLD
MM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcaaagtcagccctggttctctgcatggatgtgggcttctccatgtccaac
tcagcccctggtgaagagcctccatttgcacaggcgaaaaaagtcatccagaagtttgtc
cagcgccaggtttttgcagagaccaaggatgagctggctttggttctgtttggcacggat
tccaccaaaaactctttggaccaggatgggcaataccagaacatcacagtgcatcgtcat
cttatggtgccagactttgagctgctggaggagattgaacatcagatccaccctgagaat
cagcaggctgactggctggatgctcttgtagtttccatggaccttctccagacagaaacc
aaggggaagaaatgtgatcgcttaaacattgttctcctgactgacctgaacacggaagcc
agttcagacaagctggatgttattattgagaacttgaaacaagctggaatcaccctgcag
ttctttttgcctttcccagtggaggatgaagaagagggtgaaggagatgaggacagaacg
ggttccggtgaccctggtaggggcaaaggtctctccagggaacagcgaactggcctggaa
atggttaaaaacatcatgctgagtctggaggaggaggagggcctggaagaaatttacaca
ttcaggaatgctgtggagcagctgtgtatgtttaaacgcattgagaggagacccatggcc
tggccctgtcagctcaccatcggtagctctctgtccatccgtattgttggctacaaagca
gtgactgaggagaaactgaagaaaatgtggatcacagtcgatgctcaaaccaaccagaga
gatgatgtgaagagagagactgttttctgtctggacgatgacaatgagacagaggtgcag
aaggaagacattattcagggttttcgttacggaagtgatattgtgcctttctccaaagtg
gatcaggatcagatgaaatacaagcatgatgggaagtgctttgctgtcctgggcttcact
aaaaagaacttggttcttcgccatcagttcatgggaacacagattgtcaagatatttcct
gcacgggatgatgagcatgcaggcgtggccatgtcggctctgatccgtggtctggatgag
ctcaacatggttgccatcgtgcgttacgcctacgaccggcgcagcaatcctcaagtgggg
gctgcatttccatgtatcaaacctgattatgagtgcctcttatatgttcagctacccttc
atggaagatctttatggaagacagtttacatttccttctcttgagaacaacaagaagatt
gctccatcagagacgcagctgtcagccatcgactctcttatcgattcgatgatgcttgta
acagaagacgaagatttgctcaaacctcaccatcttcccaaccctgctttccagagacac
ttccagtgtctgcaccacagggctgtacacgctgactctcctcttccccccatggagccg
tggctggaggctgctctcgatcgccctgaggtcatccaggaacgctgccaagctccactg
caggagataaagaagttgtttccactcaccgaagtagagaagaaaaagaagctgaagaca
agcgctcagatttttggcaaagactctgaggaaccagatgccaaaaaagcaaaagaagac
gaagaggaggatgagtataacctggcaaacattgctgaaggatctgttacttctgtggga
agtgtagatccagcccgggacttccgcgctctgatcaaacagaaaactctttcgttcgga
gaagtctgtcagcaattgactcacaggatagagcagctgcttagcaacaagaacacacac
tactacatgaaaagcatcacctgtatccaggctttcagagagcagtctgtaaagcagggg
aatgctgatctgttcaacagttaccttcagtccctgaaaaggagtattcccagcagaggc
ctcgaggtcttctgggacctgcttgttcaagacgctgtgactttgatcagcaaggacgag
gttgaaggaagcgccgtgtcgaaaagtgaagcctctcagttccttttggctgaggaaaag
aaagaacaagttgctcctgaacctgtggaagacactggcgatgttgatgacttgctggac
atgatgtaa
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