KEGG   Xiphophorus maculatus (southern platyfish): 102227343
Entry
102227343         CDS       T02923                                 
Symbol
pop1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X1
  KO
K01164  ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    102227343 (pop1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xma03009]
    102227343 (pop1)
   03016 Transfer RNA biogenesis [BR:xma03016]
    102227343 (pop1)
   03029 Mitochondrial biogenesis [BR:xma03029]
    102227343 (pop1)
Enzymes [BR:xma01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     102227343 (pop1)
Ribosome biogenesis [BR:xma03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     102227343 (pop1)
Transfer RNA biogenesis [BR:xma03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    102227343 (pop1)
Mitochondrial biogenesis [BR:xma03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    102227343 (pop1)
SSDB
Motif
Pfam: POP1_C POP1_N POPLD
Other DBs
NCBI-GeneID: 102227343
NCBI-ProteinID: XP_023186798
Ensembl: ENSXMAG00000002472
LinkDB
Position
3:28825097..28837727
AA seq 964 aa
MDNKMSAAKAKRREKKMRNQPANVQYPSPPQVESRAENGGGGEGLHLTGGQSDADPSSKK
EGSAPVRHGWVRGYHKDGGGYNTEMPNHITAGAFARARAAEVSAMLKAATKTTCSSHVFQ
VLPKHMRRRAMSHNTKRLPRRLRDVANRMKEKNLLAGLKKRKEPVKSKSRKARRRHGNLL
LEFNRRQRKNIWLETHIWHAKRFHMVKKWGYCLGVRPTYKCYRPCYRAMSSHCLLQDLSY
YCCIELKGEEDKLLAALTQLTCKEAGPTFSAAMFLSGARQGSVTVYRAGRYPSDPLGPVT
FLWRPQTPGLTHRQLWIWAHPALKQDLLPELQSACQCSEAVAPPVEPEVSRAEADPTPRA
EPNPDNELKAGAKRKRRCKDGSEPPAKRILGDGTRLPTSPVTWRSSSTGLVINDLTMEII
RYRLIGPQSHSVLAETLEAATVCDELKFSPLWWPEHCKDQSNMNLHQQQTDVFNVLKGIY
STGELPPGTVLGLTVDDPRLTLPRQKVKAVPCVNQDPVGDEEKRNQLMLQGVPLQCCQSF
LWERSVRDNVTDNKISEQELNRMRSELLVPGSRLGPGPQQGRVPVLLVHQPGKQVGDELG
SWGAGWDLLLPKGWGMAFWVPLVYREVRVSGLHMSLKHSQNKAAPHFPHDYPDCPAGSRF
QEEQEAEFLDTFRRRPPAKRTNYIKHGCLAPFRCPWQQLAEEWELLVTDGGADRKGGVQT
QMTRKSHEVIEEVTSQQNVAAASPPSCFTVLRNRRSLRLLSSWCRPPTCRGQRRGRGAAA
ALPLSDSAVTSFHATHKMSVVWVRLTLLSKGKPEAHAMVCAPTAEDLKLFGKSPENCGPQ
EPPHKDHYKSRINRKKKSFKTATPSQESDDPTASTDPHSPSDLLQGLWPDPLPSVVSHCS
RVTLGWVTQGDFSLAVGRGEALGFVSVSGLLHTLLKQPPELRGTLLLRNPTSLHYRFVRL
NIDV
NT seq 2895 nt   +upstreamnt  +downstreamnt
atggataacaaaatgtccgcagctaaagccaaaaggcgcgagaagaagatgaggaaccag
cctgccaatgttcagtatccatctcctcctcaggtggagagtagagcagagaacggtgga
ggaggggaaggccttcacctcaccggtgggcaatcagatgcagatccttcctcgaagaag
gaaggatctgcacccgtcaggcacggatgggttcgtggatatcacaaagatggcggtggt
tacaacacagagatgcccaaccacatcactgctggagcttttgctagggccagagcagca
gaggtaagtgccatgctgaaagcggccaccaagacgacgtgcagcagccacgtgtttcag
gttctgcccaagcacatgaggcggcgggccatgagccacaacaccaagcggctccctcgc
aggctgagagacgtggccaacaggatgaaggagaagaacctcctggctggcttgaagaag
agaaaagaaccggtgaagagcaagagccgcaaagctcgccgtcgccacgggaacctgctg
ctggagttcaaccggcgccagaggaagaacatttggctggagacgcatatctggcacgcc
aagcgcttccacatggtgaaaaagtggggatactgtctgggggtcagacccacatacaaa
tgctaccggccatgctacagagcgatgagcagccactgcctcctacaggatctttcttat
tactgctgcattgagttgaagggggaggaagacaagctgctggctgctctgactcagctg
acatgcaaggaagctggtcctacattttctgcagccatgttcctgtcaggggccagacag
ggcagcgtcacagtgtaccgggcgggtcgctacccttccgaccccctgggacccgttacc
ttcctctggagaccccaaacaccaggactaacccaccggcagctgtggatctgggctcat
cctgctctgaaacaggatctgctccctgaattacaaagcgcgtgccaatgttccgaggcc
gtggcgccccctgttgaaccggaggtctcgcgtgcagaggctgatcccacccctcgggca
gaaccaaaccctgacaatgagctgaaagctggagccaagagaaaacggcgctgtaaggat
ggcagtgaacctcctgcaaagaggattctgggagatggaaccagattgccaacctccccg
gttacctggaggtccagctcaactggactagttataaacgatctcacgatggagatcata
cgctatcgtctgattggaccacagtctcactctgtgctggcggagactttggaggcagct
acagtctgtgatgaactgaagttttctcccctctggtggcctgagcattgcaaagaccag
agcaacatgaatctccatcagcaacaaaccgatgtctttaatgtactgaaaggtatctat
tcaactggagagctcccgccaggaacggtgctggggttgaccgtggacgacccccgactg
actctacccagacagaaggttaaagccgtaccctgtgtgaaccaggacccagtaggtgac
gaggagaagaggaaccagttgatgttgcaaggagtcccactgcagtgctgccagagcttc
ctgtgggagcggtctgtccgggacaacgtcactgacaacaagatatctgagcaggagctg
aacaggatgaggagtgaactgctggttccgggctccaggctgggccccgggccccaacag
ggccgggtccccgtcctcctggttcaccagcctggtaagcaggtgggcgatgagctgggc
tcctggggggccggctgggacctgctgcttcctaaaggctgggggatggccttctgggtc
ccgctggtgtacagagaggttcgagtcagcggcctgcacatgagtctgaaacactctcag
aacaaagcggctccccactttccccacgactatccggactgccccgcaggatcccgcttt
caggaggagcaggaggccgagttcctggacacgtttagaaggcgtccaccagccaagagg
accaattacataaaacatggctgtctagctccttttcgttgcccctggcaacagctggca
gaggagtgggagctcctggtgacggacggaggagcggacaggaaaggaggcgtgcagacc
cagatgaccaggaagagccacgaagtgattgaggaagtgacatcacagcagaacgtagct
gcagctagtcctccgagctgcttcactgttctgaggaacagaaggtctctgaggcttctc
tccagctggtgtagacccccgacatgcagaggacagagacggggtcgcggggcagcggcg
gcgctccctctcagcgactcggcggtgacgtctttccacgccactcacaagatgagtgtg
gtgtgggtgcgcctgacactgctgtccaaagggaaaccagaagcccatgccatggtgtgc
gcgccgacggcagaggacctgaagctgtttggtaagagcccagaaaactgtggccctcag
gagcccccccacaaagaccactataaaagcagaattaaccgcaagaagaagagcttcaag
acagcaactccatcacaagaatcagacgacccaactgcatccacagacccccattcgccc
tctgacctcctccaggggctctggccggaccctctgccgagcgtggtgtctcactgctcc
cgggtgacgctgggctgggtcacccagggggacttctccctggctgtggggcgtggggag
gctctgggcttcgtcagcgtctccggtctgctccacacgctcctcaagcagccgccggag
ctcagaggaacgctgctgctgcgcaaccccacctccctgcactaccgctttgtcaggctc
aatatcgacgtatga

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