Xiphophorus maculatus (southern platyfish): 102227343
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Entry
102227343 CDS
T02923
Symbol
pop1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102227343 (pop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xma03009
]
102227343 (pop1)
03016 Transfer RNA biogenesis [BR:
xma03016
]
102227343 (pop1)
03029 Mitochondrial biogenesis [BR:
xma03029
]
102227343 (pop1)
Enzymes [BR:
xma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
102227343 (pop1)
Ribosome biogenesis [BR:
xma03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
102227343 (pop1)
Transfer RNA biogenesis [BR:
xma03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
102227343 (pop1)
Mitochondrial biogenesis [BR:
xma03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
102227343 (pop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
102227343
NCBI-ProteinID:
XP_023186798
Ensembl:
ENSXMAG00000002472
LinkDB
All DBs
Position
3:28825097..28837727
Genome browser
AA seq
964 aa
AA seq
DB search
MDNKMSAAKAKRREKKMRNQPANVQYPSPPQVESRAENGGGGEGLHLTGGQSDADPSSKK
EGSAPVRHGWVRGYHKDGGGYNTEMPNHITAGAFARARAAEVSAMLKAATKTTCSSHVFQ
VLPKHMRRRAMSHNTKRLPRRLRDVANRMKEKNLLAGLKKRKEPVKSKSRKARRRHGNLL
LEFNRRQRKNIWLETHIWHAKRFHMVKKWGYCLGVRPTYKCYRPCYRAMSSHCLLQDLSY
YCCIELKGEEDKLLAALTQLTCKEAGPTFSAAMFLSGARQGSVTVYRAGRYPSDPLGPVT
FLWRPQTPGLTHRQLWIWAHPALKQDLLPELQSACQCSEAVAPPVEPEVSRAEADPTPRA
EPNPDNELKAGAKRKRRCKDGSEPPAKRILGDGTRLPTSPVTWRSSSTGLVINDLTMEII
RYRLIGPQSHSVLAETLEAATVCDELKFSPLWWPEHCKDQSNMNLHQQQTDVFNVLKGIY
STGELPPGTVLGLTVDDPRLTLPRQKVKAVPCVNQDPVGDEEKRNQLMLQGVPLQCCQSF
LWERSVRDNVTDNKISEQELNRMRSELLVPGSRLGPGPQQGRVPVLLVHQPGKQVGDELG
SWGAGWDLLLPKGWGMAFWVPLVYREVRVSGLHMSLKHSQNKAAPHFPHDYPDCPAGSRF
QEEQEAEFLDTFRRRPPAKRTNYIKHGCLAPFRCPWQQLAEEWELLVTDGGADRKGGVQT
QMTRKSHEVIEEVTSQQNVAAASPPSCFTVLRNRRSLRLLSSWCRPPTCRGQRRGRGAAA
ALPLSDSAVTSFHATHKMSVVWVRLTLLSKGKPEAHAMVCAPTAEDLKLFGKSPENCGPQ
EPPHKDHYKSRINRKKKSFKTATPSQESDDPTASTDPHSPSDLLQGLWPDPLPSVVSHCS
RVTLGWVTQGDFSLAVGRGEALGFVSVSGLLHTLLKQPPELRGTLLLRNPTSLHYRFVRL
NIDV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggataacaaaatgtccgcagctaaagccaaaaggcgcgagaagaagatgaggaaccag
cctgccaatgttcagtatccatctcctcctcaggtggagagtagagcagagaacggtgga
ggaggggaaggccttcacctcaccggtgggcaatcagatgcagatccttcctcgaagaag
gaaggatctgcacccgtcaggcacggatgggttcgtggatatcacaaagatggcggtggt
tacaacacagagatgcccaaccacatcactgctggagcttttgctagggccagagcagca
gaggtaagtgccatgctgaaagcggccaccaagacgacgtgcagcagccacgtgtttcag
gttctgcccaagcacatgaggcggcgggccatgagccacaacaccaagcggctccctcgc
aggctgagagacgtggccaacaggatgaaggagaagaacctcctggctggcttgaagaag
agaaaagaaccggtgaagagcaagagccgcaaagctcgccgtcgccacgggaacctgctg
ctggagttcaaccggcgccagaggaagaacatttggctggagacgcatatctggcacgcc
aagcgcttccacatggtgaaaaagtggggatactgtctgggggtcagacccacatacaaa
tgctaccggccatgctacagagcgatgagcagccactgcctcctacaggatctttcttat
tactgctgcattgagttgaagggggaggaagacaagctgctggctgctctgactcagctg
acatgcaaggaagctggtcctacattttctgcagccatgttcctgtcaggggccagacag
ggcagcgtcacagtgtaccgggcgggtcgctacccttccgaccccctgggacccgttacc
ttcctctggagaccccaaacaccaggactaacccaccggcagctgtggatctgggctcat
cctgctctgaaacaggatctgctccctgaattacaaagcgcgtgccaatgttccgaggcc
gtggcgccccctgttgaaccggaggtctcgcgtgcagaggctgatcccacccctcgggca
gaaccaaaccctgacaatgagctgaaagctggagccaagagaaaacggcgctgtaaggat
ggcagtgaacctcctgcaaagaggattctgggagatggaaccagattgccaacctccccg
gttacctggaggtccagctcaactggactagttataaacgatctcacgatggagatcata
cgctatcgtctgattggaccacagtctcactctgtgctggcggagactttggaggcagct
acagtctgtgatgaactgaagttttctcccctctggtggcctgagcattgcaaagaccag
agcaacatgaatctccatcagcaacaaaccgatgtctttaatgtactgaaaggtatctat
tcaactggagagctcccgccaggaacggtgctggggttgaccgtggacgacccccgactg
actctacccagacagaaggttaaagccgtaccctgtgtgaaccaggacccagtaggtgac
gaggagaagaggaaccagttgatgttgcaaggagtcccactgcagtgctgccagagcttc
ctgtgggagcggtctgtccgggacaacgtcactgacaacaagatatctgagcaggagctg
aacaggatgaggagtgaactgctggttccgggctccaggctgggccccgggccccaacag
ggccgggtccccgtcctcctggttcaccagcctggtaagcaggtgggcgatgagctgggc
tcctggggggccggctgggacctgctgcttcctaaaggctgggggatggccttctgggtc
ccgctggtgtacagagaggttcgagtcagcggcctgcacatgagtctgaaacactctcag
aacaaagcggctccccactttccccacgactatccggactgccccgcaggatcccgcttt
caggaggagcaggaggccgagttcctggacacgtttagaaggcgtccaccagccaagagg
accaattacataaaacatggctgtctagctccttttcgttgcccctggcaacagctggca
gaggagtgggagctcctggtgacggacggaggagcggacaggaaaggaggcgtgcagacc
cagatgaccaggaagagccacgaagtgattgaggaagtgacatcacagcagaacgtagct
gcagctagtcctccgagctgcttcactgttctgaggaacagaaggtctctgaggcttctc
tccagctggtgtagacccccgacatgcagaggacagagacggggtcgcggggcagcggcg
gcgctccctctcagcgactcggcggtgacgtctttccacgccactcacaagatgagtgtg
gtgtgggtgcgcctgacactgctgtccaaagggaaaccagaagcccatgccatggtgtgc
gcgccgacggcagaggacctgaagctgtttggtaagagcccagaaaactgtggccctcag
gagcccccccacaaagaccactataaaagcagaattaaccgcaagaagaagagcttcaag
acagcaactccatcacaagaatcagacgacccaactgcatccacagacccccattcgccc
tctgacctcctccaggggctctggccggaccctctgccgagcgtggtgtctcactgctcc
cgggtgacgctgggctgggtcacccagggggacttctccctggctgtggggcgtggggag
gctctgggcttcgtcagcgtctccggtctgctccacacgctcctcaagcagccgccggag
ctcagaggaacgctgctgctgcgcaaccccacctccctgcactaccgctttgtcaggctc
aatatcgacgtatga
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