Xiphophorus maculatus (southern platyfish): 102227370
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Entry
102227370 CDS
T02923
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102227370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102227370
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
102227370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
Motif
Other DBs
NCBI-GeneID:
102227370
NCBI-ProteinID:
XP_023196098
Ensembl:
ENSXMAG00000018312
LinkDB
All DBs
Position
10:4415373..4434211
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AA seq
374 aa
AA seq
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MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKAEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPDCRLADELGGLWENSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTDKAPNLDKMADDLLAAADKYALERLKVMCEDALCTSLSVE
NAAEILILADLHSADQLKTQAVDFINYHAAEVMETAGWKSMVASHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggtcccgagtccgccgccccctgcggaaatgtccagcgggcccgtggccgag
agctggtgctacacgcagatcaaagtggtgaagttttcctacatgtggaccatcaacaac
ttcagcttctgtcgtgaggaaatgggcgaagtcatcaagagttcgaccttctcttctggg
gccaacgacaaactcaaatggtgtttgcgagtgaatcccaaaggcctggatgaggaaagc
aaagattacctgtctctgtacctgctgctggtcagctgtccaaaagcagaggtgcgagca
aagttcaagttctccatcctcaacgccaagggagaggagaccaaagcaatggaaagccag
agggcgtaccgcttcgtccagggaaaagactggggctttaagaagttcatccggagagac
ttcctcctggacgaggctaacggtctcctacctgacgataagctaacgctgttctgcgag
gtgagcgttgtgcaggactcggtcaacatatcgggtcagaacacgatgaacatggtgaag
gtaccggactgccggctagcggacgagctgggtggcttgtgggagaactcgcgcttcaca
gactgctccctgtgtgtggctggacaggagtttcaggcccacaaagccatcctggcagcg
cgttcccctgtattcagcgccatgtttgagcacgagatggaggagagcaaaaagaatcgt
gtggagatcaacgacgtggagccagaagttttcaaggagatgatgtgcttcatttacaca
gacaaagctcccaacctggacaagatggccgacgacctgctagcagcagccgataagtac
gctctggagagactcaaggtcatgtgcgaagacgcgctgtgcaccagcctgtccgtggag
aacgccgccgagatcctcatcctggccgacctgcacagcgccgaccagctcaaaacgcag
gcggtcgacttcatcaactaccacgcagcggaggtgatggaaaccgccggctggaagtcg
atggtcgcctcccatccgcacctggtggccgaagcttaccgctcgctggcgtccgcccag
tgccccttcctcggaccgccccgcaagcgcctcaaacaatcctaa
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