Xiphophorus maculatus (southern platyfish): 102227564
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Entry
102227564 CDS
T02923
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xma04054
]
102227564
Pattern recognition receptors [BR:
xma04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102227564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
SPRY
LRR_6
AFG1_ATPase
LRR_4
LRR_1
Motif
Other DBs
NCBI-GeneID:
102227564
NCBI-ProteinID:
XP_023193652
LinkDB
All DBs
Position
8:4210993..4224772
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AA seq
1073 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEDEPQRKRQRIHQRLKPEPEPEPSCVSLKSDRSKGLIIEF
KSPGSPPSERVDQQSSEVPSGPSAKQHQTQLDSIFLLLEDNIVMYVKNELKKIHKILSPN
DPECSESQREDDVLEGEDEEQRRSSREAVMKITLNFLRRMKQEELADRLQKHPAAVCQHQ
LKSGLKKKFQSVFEGIAKAGSPTLLNQIYTELYITEGGTGEVNDEHEVRQIETESRKPDR
PETTIRHEDIFKVPPGRDQPIRTVMTKGVAGIGKTVLTQKFSLDWAEDKAHQNIQFIFPF
TFRELNVLKEKKFSLVELVHHFFSETKEICSFEHFQVLFIIDGLDESRLPLDFHNKEILT
DATESTSVDVLLTNLIRGKLLPSALLWITTRPAAANQIPPQCVDMVTEVRGFNDPQKEEY
FRKRFRDKEQASRIISHMKTSRSLHIMCHIPVFCWITATVLEDMLETREGGELPRTLTEM
YIHFLVVQTKVKKVKFDGGAETDPHWSPESRKMIESLGKLAFDQLQKGNLIFYESDLTEC
GIDIRAASVYSGVFTQIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFINSGAILMEE
TQRSKKSTLFNKSDLKSLHQSAVDQALQSPNGHLDLFLRFLLGLSLQTNERLLQGLLTET
GSSSQINQETVHFIKKKISKNVSAEKSINLFHCLNELNDRSLVEEIQQSLSSGSLSTDKL
SPAQWSALGFILLSSGKDLDVFDLNKYSASEEVLLRLLPVVKASNKALLSGCNLSERSCE
ALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCASL
ALALTSNPSHLKELDLSYNHPGDSGLKLLSAGLKDPHWRLEALRVEPAGVPFLTPGLRKY
SCQLTIDTNTVSRKLKLSEDNRKVTCVKELQSYPDHPDRFDNWDQLLCRTGLTGRCYWEV
EWRGDVEISLSYRRIRRKGDSGNCWFGNNDHSWSLSCSDVDGYTVCHNNIEDELSSSSVS
NRVAVYVDCPAGILSFYRVSSDSLILLHTFNTTFTEPLIPGFWLSSGSSVFLC
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagccccagaggaaacgtcagaggatccatcagagactcaaaccagaaccagaa
ccagaacccagctgtgtgtccttgaagagcgacaggtcaaagggtttgatcattgagttt
aaatctcctggatctccaccatcagagagagtggaccagcagagctcagaggttcccagt
ggtccatctgccaagcagcatcaaacacagctggactcaatatttttgctgctggaggac
aacatagtcatgtatgtgaagaatgagctgaagaagatccataagattctgagtccaaat
gacccagaatgttcagagagtcagagagaggatgatgtgttggaaggtgaggatgaagag
cagaggaggagcagcagagaggcagtgatgaagatcacactgaacttcctgaggaggatg
aagcaagaggagctggctgaccgtctgcagaaacatcctgctgcagtttgtcaacatcaa
cttaaatctggtctgaagaagaagttccagtctgtgtttgaggggattgctaaagcagga
agtccaacccttctgaaccagatctacacagagctctacatcacagagggagggactgga
gaggtcaatgatgaacatgaggtcagacagattgaaacagaatccaggaaaccagacaga
ccagaaacaacaatcagacacgaagacatctttaaagtcccacctggaagagatcaacca
atcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacagaag
ttcagtctggactgggctgaagacaaagcccaccagaacatccagttcatatttccattt
acgttcagagagctgaatgtgctgaaggagaaaaagttcagcttggtggaacttgttcat
cacttctttagtgaaaccaaagaaatctgcagctttgaacacttccaggttctgttcatc
attgatggtctggatgagagtcgacttcctctggacttccacaacaaggagatcctgact
gatgctacagagtccacctcagtggacgttctgctgacaaacctcatcagggggaaactg
cttccctctgctctcctctggataaccacacgacctgcagcagccaatcagatccctcct
cagtgtgttgacatggtgacagaggtcagagggttcaatgacccacagaaggaggagtac
ttcaggaagagattcagagataaggagcaggccagcaggatcatctcccacatgaagaca
tcacgaagcctccacatcatgtgccacatcccagttttctgctggatcactgctacagtt
ctggaggatatgttggagaccagagagggaggagagctgcccagaaccctgactgagatg
tacatccacttcctggtggttcagaccaaagtgaagaaggtcaagtttgatggaggagct
gaaacagatccacactggagtccagagagcaggaagatgattgagtctctgggaaaactg
gcttttgatcagctgcagaaaggaaacctgatcttctatgaatcagacctgacagagtgt
ggcatcgatatcagagcagcctcagtgtactcaggagtgttcacacagatctttaaagag
gagagaggcctgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagttt
ctggctgctcttcatgttcatctgacctttatcaactctggtgccatcttgatggaagaa
acacaaagatctaagaagtctacattatttaataaatctgacctaaaatctctgcatcag
agcgctgttgaccaggccttacagagtccaaatggacacctggacttgttcctccgcttc
ctcctgggactttcactgcagaccaatgagagactcctacaaggcctgctgacagagaca
ggaagtagctcacagatcaatcaggaaacagttcattttatcaagaaaaaaatcagtaaa
aatgtgtctgcagagaaaagcatcaatctgttccactgtctgaatgaactgaatgatcgt
tctctagtggaggagatccaacagtctctgagttcaggaagtctctccacagataaactg
tctccagctcagtggtcagctctgggtttcatcttattgtcatcaggaaaagatctggat
gtgtttgacctgaataaatactctgcttcagaggaggttcttctgaggctgctgccagtg
gttaaagcctccaacaaagctctactgagtggctgtaacctctcagagagaagctgtgaa
gctctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctgagtaac
aacaacctgcaggattcaggagtgaagcttctctctgctggactgaagagtccaaactgc
aacctggaaactctcagcttatcaggctgtttggtctcagaggaaggctgtgcttctctg
gccttagctctgacctccaacccctcccatctgaaagagttggacctgagctacaatcat
ccaggagactcaggactgaagctgctgtcggctggactgaaggatccacactggagactg
gaagctctcagggtggagcctgctggagtcccattcttgacaccaggtctgaggaagtat
tcctgtcaactcaccatcgacacaaacacagtgagcagaaaactcaaactgtctgaagac
aacaggaaggtgacatgtgtgaaggagcttcagtcatatcctgatcatccagacagattt
gataactgggatcagctgctgtgtagaactggtctgactggtcgctgttactgggaggtt
gagtggagaggagatgttgagatatcactgagttacagaagaatcaggaggaaaggagac
agtggaaactgttggtttggaaataatgatcattcctggagtctgagctgctctgatgtt
gatggttacactgtctgtcacaataacatagaagatgaactctcctcctcctctgtctct
aacagagtagcagtgtatgtggactgtcctgctggcattctgtccttctacagagtttcc
tctgactcactgatcctcctccacaccttcaacaccacattcactgaacctctgattcct
ggattctggctcagttctggttcctcagtgtttctgtgctga
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integrated database retrieval system
