Xiphophorus maculatus (southern platyfish): 102227687
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Entry
102227687 CDS
T02923
Symbol
gen1
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xma03400
]
102227687 (gen1)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102227687 (gen1)
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
102227687
NCBI-ProteinID:
XP_014325580
UniProt:
A0A3B5QLS2
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Position
15:9806014..9818548
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AA seq
897 aa
AA seq
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MGVHDLWSIVEPVRESVPLYSLSGKTLAVDLSLWVCEAQRVQAMMGRVTKPHLRNLFFRV
SSLTLMGVKLVFVMEGEAPKLKSETMSKRTEMRFGGSLKAHSSKSSTTTSRGRFNAVLRE
CAEMLDYLGVPWVTAAGEAEAMCAYLDSAGLVDGCITNDGDAFLYGARTVYRNFNMNSKD
PQVDCYQTSRVKTELHLSRENLVGLAILLGCDYIPKGIPSVGREQALRLIQTLRGQSLLQ
RFNQWKQESPDVPVGVAKKVPHCNLCRHPGSAKAHERGGCVLCGSQRFCQPQDFDYQCPC
DWHCYEQSRQASSLEANVRKKTLASQQFPFTEIINEFLVSKDKPVAHFKRRQPNILLMQK
FTYEKMGWPKHYTSEKVLVLMTYTELMNRKYGRDVPSQIMPIRILKPRVRNAVACFEVIW
NTPEHFVFPEERPTEDQHEVRTVEEESLFRVAFPEIVESYLRSKALLKENKTKQKKARRK
KDKPSDSPAGVADLLAQMTLQSSLENRSTQPLTHLPSSSSSEKTELIILDTPVNRKQHRK
EKEDGQVLETLPEVEPESASPSVSAIIDALHLSDIDLDAFSFTSSPSSPAVQGAEPGQTD
ETQGATKQPELCYTECPLRDRVLMRNADKSLKATCPELAAEVSKHLNCELVISHGEQTGE
ISSGSSSEGIMLTGNEKEPLPHKIQCMLKESLERSKKQKILPCDAQSKTKEESNGREKPP
PKYTFVRAALSLSSAPPQRCHSDPGQRAKKGSTKKTVCMSVCSSSEDSEVENRQSGPQRR
TKLKPADKSIRSLISDFPLKPLKTALNCDQFKAANPKTSQTLQLTGPKSQSHGEKVENET
PASTKNSRQAVQTTEVNDDEILQTPDSPVIVLDGEDLVICSDSPLPLAERLRLKFLK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttcacgacttgtggtccatcgttgagccagtccgagagtcagtgccgttgtac
agtttgagcggaaagactctggcggtggacctgagcttatgggtctgtgaggctcagcgc
gtccaggccatgatgggcagagttactaagccccatctgaggaatttatttttccgagtg
tcctcgctcactctgatgggggtgaagctcgtctttgtcatggagggagaagctcccaaa
cttaaatcagaaacgatgagcaaaaggacagaaatgagattcggaggatccttgaaagcc
cattcctcaaagtcatccacaactaccagcagagggcgctttaatgctgtactacgagag
tgtgcagagatgttggactacctgggtgtgccctgggtgacagcagctggggaagcagag
gccatgtgtgcttacctggactcagcagggctggttgatggctgcatcaccaacgatgga
gatgcattcctgtatggggctcggacagtctacaggaacttcaatatgaacagtaaagac
cctcaggtcgattgctaccagacatctcgagttaaaaccgagctacacctgtcaagagag
aatcttgttggcttggccattctccttggttgtgattatattcctaagggtatacctagt
gttggcagagagcaggccttgaggcttatacagaccctgagaggacagtcacttctacag
aggttcaaccagtggaagcaggagagtcctgacgtgcctgtcggagttgcaaagaaagtt
cctcactgcaacttatgtcgacatcctggctcagctaaggcacacgagcgtggcggctgt
gtgctctgcggcagtcagcgattctgccagcctcaggacttcgattatcagtgtccatgt
gactggcactgctacgaacagagccgccaggcatcgtctctggaggcaaacgtcaggaaa
aaaactctggcaagtcagcagttcccatttacagagattataaacgagtttctggtttcc
aaggataaacctgtggcacattttaagaggagacagccaaatattctgctgatgcagaaa
ttcacttatgagaagatggggtggccaaaacactacacaagtgaaaaggttttggtcctg
atgacctacactgagctgatgaacagaaaatatggaagagacgtgccctctcaaatcatg
cctatccgaattctgaaaccaagggtgaggaacgctgttgcttgctttgaagtcatctgg
aacactccagaacattttgtgtttccagaggaacgacccacagaggatcaacatgaagtg
aggacagtggaggaagagtcacttttccgtgtggctttcccggagatcgttgaaagctac
ctaagaagcaaagctctgcttaaagagaacaaaactaaacagaagaaagcgagacgtaaa
aaggacaaaccatctgatagtcctgctggtgtcgcagatctcttggctcagatgacgctt
cagtcgtccttagagaacaggtccactcagccactaactcatctcccttccagctcaagc
tcagaaaaaacagaattgatcattttagacactccagtgaatcgtaagcaacacaggaaa
gaaaaagaagacggtcaagtcctcgaaactctgcctgaagtcgaaccagaaagcgcttca
ccttctgtctctgccattattgacgctctacatctcagcgatattgacttggatgcgttt
tctttcacttcctctccttcctcaccggcggtccagggtgcagagcctgggcaaactgat
gaaacgcaaggtgcaaccaaacagccagagctctgttacactgagtgtcctctgagagac
agagtcctcatgaggaacgcagataaatctctgaaagctacatgtcctgagcttgcagct
gaggtttcaaaacatctgaactgtgagttggtcatttcacatggagagcaaactggggaa
atttccagtggaagtagcagtgagggcatcatgttgactggcaatgaaaaggaaccgcta
ccacacaaaatccaatgtatgttaaaagaaagtcttgaaagatcaaaaaagcaaaaaatt
ttgccatgtgatgctcaaagtaagacaaaggaggaatctaacggacgtgaaaagcctcct
ccaaaatatacatttgtcagagctgctttgtcattgtcctctgctccgccacagagatgc
cactctgacccaggacaaagagccaaaaagggcagcaccaagaagaccgtctgcatgagc
gtgtgctcatccagcgaggatagtgaggttgaaaaccggcaatctggacctcaacgtcga
acaaaactgaaaccggcagacaaaagtatacgtagcctaatatcagacttccctctaaaa
cctctaaaaacagctttaaactgtgatcagtttaaagctgctaatccaaagacttctcaa
acgcttcaattaactggaccaaaatcacagagccatggggaaaaagttgaaaatgaaaca
cctgcatcgacgaaaaacagtcgtcaggctgttcaaacaactgaagtcaatgatgatgag
attctccagactcctgattctcccgtcattgtgttagatggtgaggatttggtgatttgt
agtgacagtcccctgccactggctgagagactgagactaaaatttctgaagtga
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