Xiphophorus maculatus (southern platyfish): 102227779
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Entry
102227779 CDS
T02923
Name
(RefSeq) B-cadherin-like isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04371
Apelin signaling pathway
xma04514
Cell adhesion molecules
xma04520
Adherens junction
xma05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
102227779
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102227779
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102227779
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102227779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102227779
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102227779
04090 CD molecules [BR:
xma04090
]
102227779
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
102227779
Cell adhesion molecules [BR:
xma04515
]
Cadherins
Major cadherins
102227779
CD molecules [BR:
xma04090
]
Proteins
102227779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
RET_CLD1
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
102227779
NCBI-ProteinID:
XP_014325363
Ensembl:
ENSXMAG00000004500
LinkDB
All DBs
Position
2:complement(12453507..12460441)
Genome browser
AA seq
815 aa
AA seq
DB search
MKDMTGNRRILIVTLIFWQLKCLVSLDPAWTQLRFMGKTDNNTNSPNESNHEDDAASVLQ
LPEHPLADGLRRVKRDWVIPQINFPENVRGTYPKFLVTLKSSKAETVAITYKISGPGADQ
PPEGIFTVDDRSGMMYVTEPLDREKQAKYTLWAYALEVTGNAEQPLEIIINIIDQNDNKP
EFTQKVFTGRVSESAEVGKPILSVTAVDKDDPNTDNAIIRYRLLSQTLRMPKEEMFAINA
VSGLISLKEQGLDRETHPEYKLIIAAADMEGKGQITTCTAVITVTDSNDNAPNFTDTSMS
TTVHENAIGVEVARLKVTDMDESGSPNSNTKYSIIKGNEGGAFNITAGSNKMEGIITTAK
ELDFESLPEYKLLVVVTNEAPFSVPMSTSTATVTIKVIDRNEPPVFSPAEVHVSLSEDVR
VGTAVVQLKAKDPDTARAQRVIYKLYNDSARWLSTNHSTGSVKVVSGMDRESQYVRENKY
TVLVLAYDDDLIPATGTGTLVVSLLDVNDHLPMVRQKTATLCNSDLFPALLDIVDLDGPG
HAGPFTVELIGGHKKNWTVKTNSTSNVAALYPKQNPSSGDYNVTMRIYDVGGLYKDSSLV
VEVCHCQAGVDACLPRPDGRQDIPSFATALLGSVFGLLLLLLLLLLLLSRRRRAGKEAPL
LEDLTRDDIFCYSEEGGGEDDRDYDLSQLHRGLDNRPEVFSTDVFPTVFQALPGYRLQIQ
ANEEVCKFIEHNLQAANRDPTVPPYDSLLMFDYEGGSSEVDSLSSIQSSDSDEDQDFQSL
NQWGPRFSRLADLYAKGREEEDDDNQTLPGKSEWV
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacatgactggaaacaggaggattttgatagtgaccctcatattctggcaactt
aagtgtttggtatctctagatccagcatggacacaactgcggttcatgggcaaaactgac
aataatacaaacagtccaaatgaaagcaaccatgaggatgatgctgcctcggttctccag
ctgccagagcatccactggctgacggactgaggcgggtgaagagagactgggttattcca
caaatcaactttccagaaaacgtccgcggaacatatcccaaatttctggtgacactcaag
tcaagtaaagctgaaacagtagccataacttacaagatcagtggtccaggtgcggatcag
ccccccgaaggtatttttactgtcgatgaccggtctggtatgatgtatgtgaccgagcca
ctggacagggagaaacaagccaaatacactctgtgggcttatgccctggaagtgacaggg
aacgcagagcagcccctggagatcatcatcaacatcattgaccagaatgacaacaaacca
gaattcactcagaaggttttcaccggcagagtgagcgaaagtgccgaagttggtaaaccc
atcttgagtgtaacagctgtagataaggacgatccaaatacagacaatgctataattagg
tatcgactactatctcagacactgagaatgcccaaagaggagatgtttgctataaacgca
gtgagtggactgattagtctgaaggaacagggactggatagagagactcatccagaatac
aaactgatcattgctgctgctgatatggaagggaaagggcagatcacaacctgcactgct
gtcattaccgttactgacagcaacgataatgctccaaatttcactgacacatctatgtcc
acaacagtccatgagaatgcgataggagtggaggtagcaagattgaaagtcactgacatg
gacgagtcaggatctccaaattcaaacaccaaatactccatcatcaaaggcaatgaaggt
ggagcctttaacatcactgctggttcaaataagatggagggaataatcacaactgccaag
gagctggattttgagagcttgcctgagtacaaactgttggtggtggtaacaaacgaggcg
ccattttccgtccccatgtccacatccacagccacagtcacaataaaagttattgacaga
aacgagcctcctgttttcagcccagccgaggttcacgtaagcctctcagaggacgtgaga
gtcggcacggccgtggttcagctgaaagcaaaggacccggacacagccagagcacagcgc
gtaatatacaaactctacaacgacagcgcccggtggctgagcaccaaccacagcactgga
tcagttaaagttgtgagcggcatggaccgagagtcgcaatacgtcagagaaaacaaatat
acagttttagttttggcttatgatgacgatcttattccagctacaggaactggtactctg
gttgtgagtttgttggatgtgaatgaccaccttccgatggtcaggcagaaaactgctact
ctgtgtaactctgacctttttcctgcactcctggacatagtggatctggatggaccgggt
catgctgggccatttactgtggagcttataggaggacataagaagaactggactgtcaaa
accaattccacaagcaatgtggcagctctttaccccaaacaaaacccatcttctggagac
tataatgttaccatgaggatttatgatgttggggggctctacaaagacagttcgctggtc
gtagaggtgtgccactgtcaagctggagtagatgcctgcttgccaaggcctgacggacgt
caagacattccttcttttgcaaccgctctgctgggatctgtttttggccttctgttgctg
ctcctgctgctcctgttgctgctgagcagaaggaggagggcagggaaggaggcccctctc
ctggaagatctgacccgtgatgacatcttctgctacagtgaggagggaggaggtgaagac
gaccgggactatgatttgtcccagttgcacagagggctggacaaccgacctgaagtcttc
agcacagatgtgtttcctactgttttccaggctctaccggggtaccgtctgcaaatccaa
gccaacgaggaagtttgcaaatttattgaacataacctgcaagcggcaaacagagacccc
acagttcctccatatgactctcttctcatgttcgactatgagggtggaagctctgaggtg
gattcactcagctccattcagtcttcagattcggatgaggatcaggattttcagagtttg
aatcagtgggggccacgcttcagcagactggcagacctgtacgctaagggaagagaggag
gaagacgatgacaaccaaacactgccaggaaagtcagaatgggtctga
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