Xiphophorus maculatus (southern platyfish): 102227943
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Entry
102227943 CDS
T02923
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102227943 (hps1)
Membrane trafficking [BR:
xma04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
102227943 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
Motif
Other DBs
NCBI-GeneID:
102227943
NCBI-ProteinID:
XP_014325205
Ensembl:
ENSXMAG00000002534
LinkDB
All DBs
Position
22:complement(13781700..13789985)
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AA seq
676 aa
AA seq
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MKCLLIASESAEVLFHWSDREYRQNIQEKYGVSQEEGEGLPAFEDILSTLFAPIIISCST
LEDSYTSFTTENNHIYVLHQFDECLYIAVNGDGEEKEDDLRRKLYVLKKMVEVMFGMVTL
SGNLLRKELRPQDTEQRARLWNYLQSLLETYSLLRENDQSFLVEAVERLIHPQLCELCIE
FLERRLVQQLNSSVERAGEEVLHAFVLVHTKLLAFYSSRNASILSPSDLLALIVMAQNMY
PSNVDLDDMSPEDTESTSGSGPESFYTPEPSPSSRSSSSSEKAGRGETPVFEFVDPEIQM
AEDSLHTLEINPPDPASPRRVFLEVSHKDGLYPMMPHSMYCLSLWPGITLVLLTKISSSA
LAISVYKYLEDFDKLEKRLHEGHGAPASARSPLNMQDIRSKMDKFIKSLEPHDLQYAQLQ
NVWAEFKSRAFSRAGSGFNKDLIPWCKNMKTQLCGIYRQCFLTGSLSADVTHRLSAGLQE
RAQAMVREKLVDWKDFLLVKSKRNITMVSYLEDFPGLVHFICVDRATGQMIAPSLNITER
TTSELGKGPVANYIKNKVWALVRTTRRYLQKGYSTVTLRDGDFYFCYFLWFENETGYKLQ
PVDIPVLADDSPPIGMLAYDYYNRLLRYYSKNHKGENVKCYELLTVHLGVIPTEIILQHC
RQLASKLWEPSRNPLL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcttgttgatagccagcgagagcgccgaggtcctcttccactggagtgaccgg
gaatatcgccagaatatccaggagaagtatggggtctctcaggaggaaggcgaggggctt
cctgcctttgaagacatcttgagcactttgttcgctcccatcattatctcctgcagcacc
ttggaggacagctacacctctttcaccactgagaacaaccacatctacgtcctacaccag
ttcgacgagtgtctctacatcgctgtgaacggggacggcgaagaaaaggaggacgacctg
aggagaaaattgtacgtgctgaaaaagatggtcgaggtcatgtttggcatggtcacgctc
agtgggaacctcctgaggaaagaactgcggcctcaggacacggagcagagagcgaggctc
tggaactatctgcagagcctgctggagacctacagcctcctccgggagaacgaccaaagc
ttcttagtggaggcagtggagcggttgattcacccgcagctctgtgagctgtgcatagag
ttcctggagcgccgcctggtccagcagctcaacagcagtgtggagcgagcaggagaggag
gttctgcacgccttcgtcctcgttcacaccaagctgctcgctttctactccagccgcaat
gcgagcatcctctccccctcagacctgctggccctcatcgtcatggcacaaaatatgtat
cccagcaatgtagatctggacgacatgagtccggaggatactgagagcacatctggttct
ggtcctgaaagtttttatacaccagaaccttccccctccagtagaagctccagtagctcg
gagaaagctggccgaggagaaactcctgtgtttgagtttgtggacccagaaatccagatg
gcagaggacagcttgcacactctggaaattaacccaccggaccctgcgagccctcgaaga
gttttcctcgaggtatcacacaaagatgggctgtatcccatgatgcctcactccatgtac
tgcctctcactgtggccaggcatcacactagtgctgctcaccaagatttcctccagtgca
ctggccatctcggtgtacaagtacttggaggactttgacaagctggagaaacgattacac
gaaggccatggagctcccgcttcagccagaagtcctctgaatatgcaggacatccgctcc
aaaatggacaaattcatcaaatctttggagccccatgacttacagtatgcgcagttacaa
aatgtctgggcagagttcaagagccgagccttttccagagcaggttctggattcaacaaa
gatctcatcccgtggtgtaagaacatgaagacccagttgtgtggaatatacagacagtgt
ttcctgactggttctttgtctgctgatgttactcatcgtctctctgctggtctgcaggaa
cgagcccaggctatggttcgagagaaactggtggactggaaggacttcctgttggttaaa
agcaaacggaacataaccatggtgtcttatctggaggatttcccaggcctcgttcatttt
atctgcgtggaccgagcgactggccaaatgattgctccatcactcaacatcacagagcgc
actacgtcggagctggggaagggacctgtggctaattatattaaaaacaaggtatgggcc
ttggtcaggacaacccgccgctatctgcagaagggttattccaccgtcacactccgtgat
ggagatttctatttctgctacttcctctggtttgagaatgaaacaggatacaagttacag
ccagtggacataccagtgctagctgacgactctccacccattgggatgctcgcctatgac
tactacaataggctgctgaggtactacagcaagaaccacaagggggagaatgtgaagtgc
tatgagctgctgactgtccacctgggggtcatccccacagagatcatcctccagcactgc
aggcaactcgcaagtaaactgtgggaaccttcacgcaatccgctgctgtag
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