Xiphophorus maculatus (southern platyfish): 102227961
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Entry
102227961 CDS
T02923
Name
(RefSeq) protein Shroom1-like isoform X1
KO
K18625
protein Shroom
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102227961
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
102227961
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASD2
ASD1
Motif
Other DBs
NCBI-GeneID:
102227961
NCBI-ProteinID:
XP_005805528
UniProt:
M3ZHI4
LinkDB
All DBs
Position
11:5734604..5764457
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AA seq
1542 aa
AA seq
DB search
MDSYSLHFERMSNVDLHPLSLSVSRLSPAKSNSSIADHLSHHQHGKGDSAYSSFSGGSTA
PDYPSPFLPDDLQSSSFSHCADLKYVKSIYHPTQFLQPDSKTMDQLYRSVEAISEQYHKN
SDLNYHSLNGSESLHTNNNAHPKKEVQSSTSSQSGQAPPVPLRLDSFIATKNLENSRAHL
HGTEFKPLPQQPQQEIRLHGQPYSQSQHFPRSETAILDKSSSNLSSEPLYSVWRGSHEMQ
QVQHPPSYRLHLQLHNQTRVNLENPSIVDSNAAFELHSQSPPHGRNQPEHLTPKQTSSMI
GCNGDHQIKSGGYFQSERKRAYSAQEVHGSSELQRADRPRNGSQSCLSSSIQHKGQFYFV
TGVYKPYEPAVRTHSAAISGTEFVREVSAVLETHHQDNPRSHSTMDNFFRPFYESSHTSS
GMIPEDEEVFTSVDQGMVQMSKSLDQENYTPPHFLNVLDESREIGHHTASNPIFYCGPDL
KSPPQSATHQNDVNLVMGNKSTNYNRREDHTNRGKRQPLEDIASERINKETTPLLYHLTG
ASRTAMQPNPDPGFSGRKEGVLNKSVQEEVAVNNNETPAQGDASRNHRGDVLSAASGTLD
DSFKKYYKEKLKDAQCKVLSKTSFKRRDLQLPLPHCLTQNSECRPAVIHSFSSSQDSEIS
TDTLTPSLTSQDTEKGSLTEVGDIQKEIEKSFEKKNLRLANVAQPQVARIGGRKRLTPEQ
KKMCFSEPEKLNELGRTPKHSVCCSFGNESEGLFAAEFEGEDAAQQAEQGLVAARREMFE
SRGRALSVSSASKTNLKHVQHQALVEYMERKTGQKVAEPQHPTSHLPTPSRQRHSLGEKP
FDWNPRPQSWNHEKHTKKKHLRPHSAGRILDSPSSSIRYAQFFSAQSCSGHYPGHQNSSR
PRESHGPPQGKSASAESLLDQRESTSFLRNRSTSTPHTFQQTQDKEENPEPVSTMETQSC
RKNEAEQPSEKRVAEGQQLSRKVGQRGKSMEELGASKITKVSTLSKSSEHLDQLRRNSAE
PAGRSKNIRSISNFAEDGDARRQETRKEEEFVGQNNSQGQNQHQTQKHPPQKQSSEQRED
ATRETGSGGSVSPVSSGEPSETFSNPPSPKGQKISEWEIKSTCSTPTQTKRPCESTPVSS
RSGTSPRLEREQTVDESSGEANHEVTLSCGITTDPSLWILPPEEELQEDLRNSFQTNNVS
DERGNSISTKQTSDSSVSPSMSASKAEVSHQADEQKELDLEAETVGQKEEMKKREMPEGE
TDSSEKSAKKPKWEELVKAVVKADRSLARVLCPLASRKTALMLMEQLLSEDTLLMEEHYK
KKQEQKGAGESNEVSKGAEPSPCPPDSDSERFQCTDEQSQADITEMKRLLVSYIHEHLRS
LEESREALQTDVEENAALGEAMKLLVGERCLPVELERYNLFIGDLERVVNLLLCLSARLA
RVQNALSVVDQHTDAEEKESLDSRHRLLCKQREDAKDLKDNLDRRENLVSTFLSRQLSAE
QLQDYRRFVQTKASLLIRQKDLEEKQRLGEEQLEELFNSLNM
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggattcttacagcttgcactttgagagaatgagcaacgtggacctgcatcctcttagc
ctgtctgtaagccggctttcgccagccaagtccaacagcagtattgctgaccatctaagc
caccaccagcacggcaaaggagattctgcatacagctccttctctggtgggtccactgcc
ccagactacccatctcccttcctccctgatgacctacagtccagctccttcagccactgt
gctgaccttaaatatgtaaagtctatttaccatccaacccagtttctgcagcctgactca
aagaccatggatcagctctaccgctctgtcgaagccatctcagagcagtatcacaaaaac
tctgatttgaactaccatagccttaatggcagcgagagtttgcacaccaacaacaatgca
caccctaaaaaagaggtacagtcgagcacttcgtcccaaagtggtcaggccccaccggta
ccattacgccttgatagttttatagccactaaaaacttggagaacagcagggctcacctc
catggtactgaatttaaacccctgccccaacaacctcaacaagagattcgactccatggc
caaccatattctcagagtcaacatttcccaaggtcagagacagcgatcctagataagagc
agctcaaacctgagttctgaaccactgtactctgtttggagaggctctcacgagatgcag
caggtccagcatccaccaagctaccggctgcatctccaacttcacaaccagacaagggtg
aacctagaaaacccttccattgtggacagcaatgctgcctttgagctccacagccaatca
ccacctcatggtagaaaccagcctgaacatctgacacccaaacagacttccagcatgatt
ggctgtaatggagaccatcagattaaatctggtggttattttcaaagcgagcgcaaaagg
gcttactcagctcaggaagtgcatggttcttcagaactgcagcgagctgaccgtccccgg
aacggcagccagagttgtctaagcagcagcattcagcataagggccagttctactttgtc
acaggggtgtacaaaccatatgaacctgctgtgaggacacattctgcagccataagtggt
acagaatttgtaagggaggtctcggctgtgttagaaacccaccatcaagacaacccgcga
tcccacagcactatggataattttttcagacctttctatgagagttcgcacacgtccagt
ggtatgattccagaagatgaggaggttttcacttctgtggatcagggaatggtccagatg
tccaagagcctggaccaggagaattacaccccaccccactttttaaatgtcttggacgaa
agtcgtgagattggccaccacacagcaagcaacccaatattctactgcggacctgattta
aagagcccaccacagtcagccactcatcaaaatgacgtcaatttggtgatgggcaacaag
tcgacaaactacaacagaagagaagatcataccaatagagggaagcggcagcctttggaa
gacattgctagtgagaggataaacaaagagacaacaccactgctgtatcacctaactgga
gccagtcgaacagcaatgcagcccaatccagatcctggattcagtggaaggaaggaaggt
gtccttaataaatccgtccaggaagaggtagcagtaaataataatgagacacctgcacaa
ggtgatgctagcaggaaccacagaggagatgttctgtccgctgcttccggcaccctggat
gattcttttaaaaagtactacaaagagaaacttaaggatgcccagtgcaaagtcttgagt
aagacgtcatttaagaggcgagacctgcagctgcctttgccacattgtttgacacaaaac
tctgagtgcaggcctgcagtgattcactcattttcctcatcacaagactctgagatatca
acagacacactcactccatctttgacatcccaggacacagagaaaggcagcttaacagag
gttggggacattcagaaggaaattgaaaaatcgtttgagaagaaaaacttgcggttggca
aatgttgctcagcctcaagtggcgcgtatcggaggcagaaaaagactgaccccagagcag
aagaagatgtgcttctcagagccagagaaactcaacgagctcggcagaacgcccaaacac
tcggtttgctgctcgtttgggaatgagagtgaaggattgtttgcagctgagtttgaagga
gaggacgcggcacagcaagcggagcagggactggttgcagcacggagggagatgtttgag
tcaagaggtcgagctctgtctgtctccagtgcgtcaaagaccaacctaaagcatgttcag
catcaggccctcgtggaatatatggaacgaaagacaggccagaaagtggctgagccgcag
cacccaacatctcatttaccaactccatccagacaaagacattctctcggtgagaaacca
tttgactggaatcctcgcccacaatcatggaatcatgagaaacacacaaagaagaaacac
cttagaccccactctgctgggcgtattcttgattcacccagtagctccatcaggtatgcc
cagttcttttctgcccagtcctgctcaggccactatcctggccaccaaaactcttccaga
ccgagggagagtcatggtccacctcagggaaaatctgcatctgcagagagtctgttggac
cagagggagtcgaccagcttcctcaggaacaggtccacatccacaccacatacatttcag
cagacacaagacaaagaagagaatccagaaccagtcagcaccatggaaacccagagctgc
cggaagaatgaagcagaacaaccatcggagaagcgagtcgctgaaggccagcagctttct
cggaaggtggggcagagaggaaagtccatggaggagcttggggcatcgaagataactaaa
gtatcgaccctgagcaaaagctcagagcacctggatcagctgcggaggaattcagctgag
cctgcaggaaggagcaaaaatatcaggagtatttcaaactttgctgaagacggagacgct
cgacgacaggaaacaagaaaagaagaagagtttgttggtcagaataactctcagggacag
aaccaacaccaaacccagaaacatcctccccagaagcaaagctctgagcagagggaagat
gcaaccagagaaacgggctctggtggatccgtctctccagtctccagcggagaacccagc
gagacattttccaacccaccttcccccaaaggtcaaaagatcagtgaatgggagatcaaa
tccacctgttccacacccacccagacaaagcgtccttgtgaaagcacacctgtctccagt
agaagtgggacttccccaagattagagagggagcaaactgtcgacgaatcaagtggcgag
gcaaaccacgaagtgacgctgagctgcggcattaccactgatccgtcactgtggattctc
ccaccagaagaagagctccaggaggatctccggaactcctttcagacaaacaatgtttcc
gacgagcgtggtaactccatctccacgaagcagacaagcgactcctctgtgtctccttct
atgtctgcctccaaagcagaagtcagtcaccaggcagacgagcaaaaagaactggatctg
gaagctgagacggtgggacagaaggaggagatgaagaagagggaaatgccagagggagag
acagacagctcagaaaagtctgccaagaaacctaagtgggaggaacttgtaaaggcggtg
gttaaagctgataggtcactggccagggtgctctgtccgctggccagtcgtaaaactgcc
ctgatgttgatggagcagcttttgtcggaggacaccctgctgatggaagagcactacaag
aagaaacaggagcagaaaggagctggtgaaagcaacgaagtgagtaaaggagctgaaccg
tctccatgtccgcctgattcagacagcgaaagatttcagtgtacggatgagcaaagccaa
gctgatatcactgagatgaagcgtttgttagtttcttatatccatgagcatctgcgttct
ctggaggagtcacgtgaagccctgcagacagatgtggaggagaacgcggccctcggggag
gcgatgaagctgctggtgggggagcgctgtctgccagtggagctggagaggtacaacctg
ttcatcggggacctggagagagtggtcaacctgctgctgtgcctttctgcccggctggcc
agggtgcaaaacgccctgagtgttgtggaccaacacaccgacgctgaggagaaggagtct
ctggacagtcgccaccgcctgctgtgcaaacagagggaggatgccaaagatctgaaggat
aacctggaccgcagagagaacctggtctccaccttcctgtcgcgccagctgtccgccgag
cagctacaggactaccggcgcttcgtccagaccaaggcctcactcctcatccgccagaag
gacctagaggagaagcagaggctgggagaggagcagctggaagagctttttaacagtctg
aacatgtga
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integrated database retrieval system
