Xiphophorus maculatus (southern platyfish): 102227991
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Entry
102227991 CDS
T02923
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04080
Neuroactive ligand-receptor interaction
xma04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102227991 (gabra4)
04082 Neuroactive ligand signaling
102227991 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102227991 (gabra4)
Ion channels [BR:
xma04040
]
Ligand-gated channels
GABA-A
102227991 (gabra4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
102227991
NCBI-ProteinID:
XP_005813947
Ensembl:
ENSXMAG00000004117
UniProt:
M3ZPL1
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All DBs
Position
23:complement(26230194..26257300)
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AA seq
550 aa
AA seq
DB search
MLFAKKKEMVTATRPAFIRTLVYFFCLTTCAKTISGQSRKDERIYPENFTRILDRLLDGY
DNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLMYEGPVEILRL
NNLMVTKVWTPDTFFRNGKRSVAHNMTAPNKLFRIMKNGTILYTMRLTISAECPMKLVDF
PMDGHACPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETIKSI
TGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTM
TTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQIERAKKKPGKCP
PVPQSTPVKVKDTEEVQQQVLDTNGSLRKRMNYISHQDLAGQPRAQSTTNISGLGRGRRL
RALAGGANSSSSTLSRSSPKSESLLSVASSSAQLMKGTPQPAASSPDVMAGTPAPALQHL
LGPKLERIQMMGNKLEPKQTPCSQPTAAGMGGTSKIDKYARILFPVSFGAFNMVYWVVYL
SKDTVVAKGG
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcgcaaagaagaaggagatggtgacggcgacgagacccgcgttcattcggacc
ctggtctactttttctgtttgacgacttgtgcgaaaacaatctccggacaatcaaggaag
gatgagaggatttacccggagaatttcactcggattttggaccgactcctggacggctac
gacaacaggctgcgacctggattcggaggtcctgtgacagaggtgaagactgacatttat
gtgacaagttttgggccagtctcagacgttgaaatggaatacactatggatgtattcttt
cggcagacctgggttgatcggagattgatgtacgagggtccagtggagatactgagactt
aacaacctgatggtgaccaaggtctggacaccggacactttcttcaggaacggcaagcgg
tcagtcgcccacaacatgaccgcgcccaacaagctcttccgcatcatgaagaacggcacc
atcctttacaccatgaggttgaccattagcgccgagtgtcccatgaagctggtggatttc
cccatggacggacatgcctgccccctcaagtttggaagctacgcctatcccaaaacggag
atgatctacacttggaccaaagggcctcagcattcggtggaggtccctcccgagtcctcc
agcctcgtccagtacgatctcatcggccagacggtttccagcgagaccattaaatcaatc
acaggcgaatatgtggtgatgacggtctacttccacttgaagcggaagatgggctacttc
atgatccagacgtacatcccctgcataatgacagtcatcctctctcaagtgtccttctgg
ataaacaaggagtcggtcccggcgcggaccgtttttggcatcaccaccgtcctgaccatg
acgacactcagcatcagcgcccgccactctctccccaaggtctcgtacgcaaccgccatg
gactggttcatcgccgtctgcttcgcctttgtcttctctgccctcatcgagttcgccgcc
gtcaactatttcaccaacgcacagattgagagggccaagaagaagccaggcaagtgtccc
cccgtgccccaaagcacgcccgtcaaggtgaaggacacagaggaagtgcagcagcaagtt
ctcgacaccaacggttctctgaggaaacggatgaattacatctcgcaccaagacctggcg
ggccagccgagagcccagtccaccaccaacatctcagggctgggaagaggaaggcggctg
agagctctggctggcggcgccaacagcagctcctccactctctcccgctccagccccaag
tccgagagcctgctgagcgtggcctcgtcctcggcgcagctgatgaagggcacgcctcag
cccgcggcgtccagcccggacgtgatggcggggacgccagcacctgctctgcagcacctg
ctcgggcccaagctggagcgaatccagatgatgggcaacaagctggagccgaagcagacg
ccctgctcccagccgaccgccgccggcatgggcggaaccagcaaaattgacaaatacgcc
cggatcctgttcccggtgtcctttggggcgttcaacatggtctactgggtggtctacctg
tcgaaagacacagtggtggccaaagggggataa
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