Xiphophorus maculatus (southern platyfish): 102228037
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Entry
102228037 CDS
T02923
Name
(RefSeq) cyclin-T1-like isoform X2
KO
K15188
cyclin T
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102228037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102228037
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
102228037
Brd4/P-TEFb complex
102228037
7SK RNP complex
102228037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
MAML1_3_TAD1
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
102228037
NCBI-ProteinID:
XP_005801952
Ensembl:
ENSXMAG00000009357
LinkDB
All DBs
Position
1:complement(29227175..29233558)
Genome browser
AA seq
682 aa
AA seq
DB search
MAASFRSLPSSCNNKWYYTRQQIDNSPSRQAGLDPDKELSYRQQAANLLQDMGQRLNVSQ
LTINTAIVYMHRFYMVQSFTRFHRNVISPAALFLAAKVEEQPRKLEHVIKVAHACLNPQD
PSPDTRSDAYLQQAQDLVILESIILQTLAFEITIDHPHTHVVKCTQLVRASKDLAQTSYF
MATNSLHLTTFCLQYSPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLELLDE
LTHEFLQILEKTPSRLKRIRNWKAGGQTPKAKPKVQEDGDQRDTMISMISMVSSESTVAG
LMSLSAPPSGSSSSGGDKERVVPGSAATWSGKGVVGGEQPAANHEVHAPAKVSLSEYRAK
NADVLAAQKRKLENMEASVKRDYANAAQALIGQQKKHHHQQTSSSSSSDVSNPSPIILKI
PVDRERPDKHLKMRFPMPAGGGGGHGDRGQDPDIKVKIRVPEKPRGGSGEEGKSREKHRE
RSNHHHHHQQHHHHQQHHHHSSSSSASLSSSHKHSSSTGGSLGSNKKVPSDSSRSSSSSS
SSSRKRTHSQDPHAASAAKASKTSRNAYQLPSLSSGQTLGSDVLPPLGLSHHQGAFSHSK
GDKMDTNGHGAADGAQSNEYQDTFEMLNSLLSAQGVQPSQPSMYDYRSQYADYRFPGGSR
GANPRPPPLPSEPPPPLPPLPK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcgtttcgttcgctcccttcaagctgcaacaacaaatggtactacacccga
cagcagatcgacaacagcccgtctcggcaagctggacttgatcccgacaaggagctgtcc
tacagacaacaggcagcgaacctcctccaggacatggggcagcggctcaatgtatcccaa
ctaactattaatacagctattgtgtacatgcatcggttctacatggtccaatcatttaca
aggtttcacagaaatgtcatctctccggccgctcttttcctcgcagcgaaggttgaggag
cagccccgaaagttggaacacgtaatcaaggtggcgcatgcatgtctaaaccctcaggac
ccctcgccggacacccgcagcgatgcttacctgcaacaagcccaagacctggtcattctt
gagagcataattctccagaccctggcgtttgagatcacaattgatcatcctcacactcat
gtggtgaaatgcacccagctggtcagagccagtaaggatctggcccaaacatcttacttc
atggcaaccaacagcctgcatttgaccacgttctgcctgcagtatagtccacctgttgtc
gcctgtgtctgcatccatctggcctgcaaatggtccaactgggaaatccccgtctctacg
gacgggaaacactggtgggagtatgtggatcccacagtcaccctggagctgttagacgaa
ctcacccacgagtttcttcagatcctggagaaaacacccagtcggctcaagcgaattcga
aactggaaggccggaggtcaaactccaaaagccaagccaaaggtgcaggaggacggagac
caaagagacaccatgatcagcatgatctctatggtgtcatcagaaagcaccgtggcgggc
ctgatgagcctctcggcgccgccgtccggctcctcctcctcggggggagacaaggagcgg
gtggtgccgggcagcgctgccacgtggagcggaaagggcgtggtcggcggcgagcagccg
gcggccaaccacgaggtccacgccccggccaaggtgtcgctgagcgaataccgggccaag
aacgctgacgtcctggccgcccagaaaaggaagctggagaacatggaggccagtgtgaag
agggactacgccaacgcagcgcaggctctcattggccagcagaagaagcatcatcaccag
cagaccagctcctcctcgtcctccgacgtttccaacccctcgcccatcatcctcaaaatt
cccgtggacagggagcggcccgacaaacatttgaaaatgcgtttcccgatgcctgcaggc
ggtggcggtggccatggcgacaggggtcaggatccggacatcaaagtgaaaatacgggtg
ccggagaagccgagggggggttcgggagaggagggaaaaagccgggagaagcacagggag
cgctccaaccaccaccaccatcatcagcagcatcatcatcatcagcagcaccaccaccat
tcctcctccagcagcgcctcgctgtcctcctcacacaaacactcgtccagcactggcggc
tcgctgggcagcaacaaaaaagtcccgagcgattcgtccaggtccagttcctcgtcttcg
tccagctcccgaaagaggacgcattcgcaggacccgcatgccgcctctgccgccaaggcc
agcaagacctccaggaacgcctaccagctgccctccctgtcttccggacaaaccctgggt
tcagacgtcctgccaccgctgggcctctcccaccaccagggagcattctcgcactccaaa
ggcgacaagatggacactaacgggcacggtgcggcggacggcgctcagtccaacgagtac
caggacacttttgagatgctgaactcgctgctgagcgcgcagggcgtgcagccgtcgcag
ccgtccatgtacgactatcgatcccaatacgcggactaccggttccccggcggctccagg
ggtgccaaccccagaccgcctcccctgccctcagaaccgcctccccctctgccgccacta
cccaaatga
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