Xiphophorus maculatus (southern platyfish): 102228078
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Entry
102228078 CDS
T02923
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44 isoform X1
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102228078 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102228078 (dis3)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
102228078 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
102228078
NCBI-ProteinID:
XP_005812222
Ensembl:
ENSXMAG00000018215
UniProt:
A0A3B5RBZ5
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All DBs
Position
22:18360826..18370526
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AA seq
951 aa
AA seq
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MLKSKTFVKKTRSGGVMKVVREHYLRDDIWCGSEVCTECKQDSAVLQRDACIESSLCPYP
HYLVPDTNIVLRQIDVLEDPVIRNVIILQTVLQEVRHRSAPVYKRLKDIIHEQGRHFYTF
TNEHHRETFIEREPGESANDRNDRAIRVAVKWYSQHLKTAESGSDGLKVVLLTNDQGNKL
KAEENGLVVYKFDEYIKSLIGNPELVDCLALSNDDKNEVTSSKVLFPEHLPLSKVQAGIK
SGSFLQGTFRASRDNYLEATVFVQGEGEDSTEVLIQGLQNLNRAVHQDVVAVQLLPKNQW
VAPSSVVLQDDGAAKDDNVDEDEEEKVLTGPLTETARRATGKVVGIIKRNWRPFCGMLNV
SQIKESTRHLFTPADRHIPRIRIETRQASTLAGQRIMVAIDGWPKDSRYPNGHFVRSLGG
AGEKDTEEEVLLLEHDVPHQAFSQAVLSFLPKMPWSITPEDMAQRQDLRHLTVCSVDPPG
CTDIDDALHYRELENGKLEVGVHIADVSHFIRPGNALDKEAANRGTTVYLCGKRIDMVPE
LLSSNLCSLRSNVERFAFSCIWELNHKAEILKTRFTKSVINSKASLTYAEAQMRIDDASK
NDDITKSLRGLNKLAKILKRKRIENGALTLSSLEVRFHMDSETHDPIDLQTKELVETNSM
VEEFMLLANISVAQKIYDEFPESALLRKHPAPPPSNYDILIKAAKSKNVMIHTDSAKALA
DSLDVAKVDGFQYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIRRY
ADIIVHRLLAVAIGADSTYPDLMDKHKQSTLCNNLNYRHKMSQYAQRASVAFHTQLFFKT
RGILNEEGFVLFVRKNAIIVLIPKFGLEGTVFFDSKDKASPNLVFDEEGPTLKVEQHTFH
IFDQVKVTISLDDSNIQHQKIRMALTEPVIPGVSVPVPEAEPQAKKQKLDR
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtctaagaccttcgttaagaagacccgatcgggtggggtgatgaaggtcgta
cgtgagcattacctgagagatgatatttggtgtggaagtgaagtctgcactgagtgcaaa
caggactccgcggtgctgcagagagacgcgtgtattgagagcagtctgtgtccctaccct
cactatctggttcctgacaccaacatagtgctgcgtcagattgacgtgttggaagatcct
gtgattcgcaacgtgataatccttcagactgttcttcaggaggttcgtcatcgcagtgca
ccggtttataaacgcctgaaggatatcatacatgagcaaggaagacacttctacacattc
accaacgaacaccacagagagacattcatcgaacgtgaaccaggggagagcgccaatgac
cgtaatgatcgggcaatccgtgtggccgtcaaatggtatagccagcatctgaaaacggca
gagtcgggctcagatggtctcaaggtggtcctcctcaccaacgatcaaggcaacaagcta
aaagctgaagaaaacggcttggtggtgtacaaatttgatgaatacatcaagagtctgata
gggaaccctgagttggtggattgcttggctttgtccaacgatgataagaatgaggttacc
agcagtaaagtgttgtttccggagcatctccctctgtcgaaggtccaggcgggaatcaag
tctggctcatttctccagggaaccttcagggccagcagggacaactatctggaggccacg
gtttttgtccaaggagagggggaggacagcacagaggttcttatccagggtcttcagaac
ctcaacagagcagtgcaccaagatgtggttgctgtgcagctgttgccaaagaatcagtgg
gtggcgccgtcgtcagttgtgctgcaggacgacggtgcggcgaaggacgataacgtcgat
gaggacgaggaggaaaaagtgctgacgggaccattaactgagacggccaggagggctact
ggaaaagtggtgggaatcatcaaaaggaactggaggccattctgtggcatgctgaatgtc
tcccaaatcaaagaatccacccgccatcttttcaccccagcagatcgccatatcccacgc
attcgcatcgaaacacgacaagcctccactcttgcaggtcagaggattatggtggccatt
gatggctggcccaaagactctagatacccaaatggtcattttgtccgcagtctgggaggc
gctggtgagaaggacaccgaggaggaagtcctgcttctggagcacgatgttccacatcag
gccttctctcaggccgttctcagtttccttcccaaaatgccgtggagcatcacaccagag
gacatggcacagaggcaggacctgaggcatttaacagtgtgcagtgtggatcctccagga
tgtacagatatagatgatgctctgcactacagggagctggaaaacgggaagcttgaggta
ggagttcacatcgctgacgtcagtcactttatcagacctggcaatgctctggacaaagag
gcggctaaccgagggaccaccgtgtatttatgtggcaaaagaatagacatggttcctgag
ctgctcagctctaacctttgctctctacggtccaatgtggagaggtttgctttttcatgt
atttgggagttgaaccacaaagcagaaattttgaagactcggtttactaaaagcgtcatt
aactccaaggcgtctctcacttacgccgaggcccagatgaggatagatgatgccagcaag
aacgacgacatcactaaaagcttgaggggcctcaacaaactcgcaaagatcctcaaaagg
aagaggatagaaaatggggccctgacgctgtcttccttagaggttcggttccatatggac
agtgaaactcatgatcccattgatctgcagactaaggaactcgtggagacaaactccatg
gtggaggagttcatgttgctcgccaatatttcagttgctcagaagatttatgatgaattt
ccagagagcgctctcctgaggaagcatccagctccccctccgtccaactacgacatcctg
atcaaagctgcaaagtccaagaacgtgatgatccacacagattcggccaaagccctggcc
gattccctggatgtggccaaagtggacggcttccagtattttaacacgctcctgcgtatt
ttagccactcgctgcatgatgcaagccgtttatttttgttctggcatggacagcgacttc
caccattacggtcttgcctcgcccatttacactcacttcacctccccgattaggaggtac
gctgacatcattgtgcaccgcctgctggcggtggccatcggagcagacagcacctaccct
gatttgatggacaaacacaaacagtcaaccctctgcaacaacctcaactacagacacaaa
atgtctcagtacgcacagagagcgtctgtggccttccacactcagttgttcttcaagacc
agaggaattctcaacgaggagggattcgttctgttcgtgcggaagaacgcgatcatcgtt
ctgatcccaaagttcggtctggaaggaaccgttttctttgactccaaagacaaagcttct
cccaacctcgtttttgacgaagagggtcccactctgaaggtggagcagcacactttccac
atatttgaccaggtgaaggtcaccatcagcctggacgactccaacattcagcaccagaag
atccgcatggctctaacagaacctgtgattcctggtgttagtgttcctgtacctgaagca
gaaccacaagccaagaagcaaaaactggaccgctga
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