Xiphophorus maculatus (southern platyfish): 102228086
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Entry
102228086 CDS
T02923
Symbol
slitrk2
Name
(RefSeq) SLIT and NTRK-like protein 2
KO
K25833
SLIT and NTRK-like protein 2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102228086 (slitrk2)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRNT
LRRCT
MCLC
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
102228086
NCBI-ProteinID:
XP_005814921
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Position
23:28916473..28920729
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AA seq
892 aa
AA seq
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MLSGVLFLSVLTVTSLTPSETQSRKTSPLKDICKTRCDCEERENVLNINCENKGFTTVSQ
LQAPPNKVSQLFLNANFLSRLSANEFVSYGNVTSLHLGNNGLQEIQTGAFNGLRFLKRLH
LNNNNLEVIKEDTFAGLESLEYLQADYNYISTIEPGAFSKLNKLKVLILNDNLLLALPPN
IFRFVLLTHLDLRGNRLKMLPFAGVLEHIGGIMEIQLEENPWNCTCDLIPLKSWLDTISV
FVGDIVCETPFRLHGKDITQLIKQDLCPRRNAGERAQSASDSHFQGAPHPTYHAGVVTPT
RSPKASRPPKMRYRPTPRLSKDKHVFGPIMVYQTRSPVPMLCPSVCVCTSQNPDSGLNIN
CQERKLQNISELNPKPTYPRKLHLTGNYLQMIYRTDLTEYSSLELLHLGNNRIAVIQEGA
FENLTNLRRLYLNGNYIESLSQSLFAGLQSLQYLYLEYNIIKEILPQTFNSLHNLQLLFL
NNNLLRSLPDNVFGGTMLTRLNLRNNHFSYLPVQGVLDQLSAFIQIDLQENPWDCTCNIV
ALKNWMELSSTSVVVNEITCDSPSKHAGRLLRSLRNEAICPEPSEPPPPQLPLPTKAPTV
ISPSTEATTSPSPSPSPSFSSVSPTDSHLQTPELHPEVPLSVLILGLLVVFILSVCFGAG
LFVFVLKRRKGVEHVPTGANNLDLNSFQVQYGSYTPEPTHDKSSESHVYNYIPPPVGSMC
QNPIYMQKDGEQVAYYRNLKELSFRPLDAKKEDILTRSPGTYTISTVDFMDKSPTCGLSS
PEPPEMLYQNIGERPNKELPTAAGAPPFTYNFCTLPKRPCIVPPYEAAAARRHLTNPDRL
NKAVLYGTPRKYFGPEHFSKNNEHPSLLLPGKLKTEPDYLEVLEKQTAMSQL
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcggcgtcctgttcctgagcgtcctcaccgtcaccagcctgacaccgtccgaa
acgcaaagccgcaaaacttcacccctcaaagacatctgcaagacgcgctgcgactgcgag
gagcgggagaacgttctgaacatcaactgtgagaataagggatttaccacggtcagccag
ttgcaggcgcccccgaataaagtctcgcagctctttctgaacgcaaacttcctgtcaagg
ctcagtgccaatgagtttgtcagttatggcaatgtcacctctttacatctgggaaataat
ggcttacaggagattcaaacgggggctttcaacggtctccgcttcctcaagcggctccac
ctgaacaacaacaacctggaggtgattaaagaggacacgttcgcaggactggagagtttg
gaatatttacaggcagactataattatatcagcactatagagcctggcgctttcagcaag
ctgaacaagctcaaagtgttgatcctcaacgacaacctcctgttggctctgcctcccaac
atcttccgttttgttctgctcacccatctggatttacgtggcaatcggctgaagatgctg
ccgtttgccggtgtgctggagcacatcggcggcatcatggagatccagctggaggagaat
ccctggaactgcacctgcgacctgatccccctcaagtcctggctggacaccatctccgtc
ttcgtgggggacattgtgtgcgagacgccgttccggctgcacgggaaggacatcactcag
ctcataaagcaggacttgtgtccgcgcaggaatgctggggaacgggctcagtctgcctcg
gactctcatttccaaggggccccacacccgacctaccacgcaggcgtcgtcactcccact
cgctccccgaaagcctcccggcccccaaagatgcgctacaggcccactcctcgcctctcc
aaagacaagcatgtctttggacccataatggtgtaccaaactcgctctcctgtccccatg
ctgtgtcccagcgtgtgtgtttgcacgtcgcaaaaccccgacagcggcctgaacatcaac
tgtcaagaacggaagctgcagaacatcagtgaactgaaccccaaacccacataccccagg
aagctccacctaacagggaattacctgcagatgatctacagaacggatctgacggagtac
agctccctggagctgctccatctggggaataacaggattgcagtgattcaggaaggcgca
tttgagaacctgacgaacctcaggcgcctctaccttaatgggaattacattgagtcgctc
tctcagtccctgtttgctggtttgcagtctctgcagtacctgtatctggaatacaacatc
ataaaagagattctaccacagacattcaactctctgcacaaccttcagctgcttttcctc
aacaacaatctgctgagatcgctccctgacaatgtttttgggggcaccatgctgacccga
ctcaacctgaggaacaatcatttctcctacctcccggttcaaggcgttctggaccagctg
tcggcgttcatccagatcgatctgcaggagaacccctgggactgcacctgcaacattgtg
gcgttgaagaactggatggagctgtccagtaccagcgtggtggtcaacgaaatcacatgc
gattcgccctcgaagcacgccggtcggctgcttcgctcgctccgcaacgaggctatttgc
cctgagcccagcgagccccctccgcctcagctgccccttcctacaaaagccccgacggtg
attagtcccagcaccgaagccaccacctctccgtctccctctccttccccttcgttcagc
tcggtgagcccaacagattcccacctccagacaccggagctgcaccccgaggtgcccctc
tcggtcctgatcctaggcctcctcgtggtcttcatcttgtcggtctgcttcggggcaggc
ctttttgtttttgtcctgaagcgacgcaaaggggtggagcacgtccccacgggcgccaac
aatctagaccttaactctttccaagtgcaatatggctcctacaccccggagccgacgcac
gacaagagctccgagagccacgtttacaactacatccccccgcctgtgggctccatgtgc
caaaaccccatttacatgcagaaggacggcgaacaggtggcttactatcgaaacctgaag
gagctcagcttcaggccgctggacgcaaagaaggaagacatcttgacccgcagcccaggg
acctacaccatcagcacggtggattttatggataaatcaccaacatgtggtttgagcagc
ccagagcctccagagatgctctaccagaacatcggggagaggcccaacaaggagctcccg
acggcagcaggcgcccctcccttcacctacaacttttgcacgctgcctaaaagaccctgc
atcgtgccgccctacgaggcggcggcggcccggcgccacctgaccaacccagacaggttg
aacaaagccgtgctgtacggcactccgaggaaatacttcgggccggagcacttctccaaa
aacaatgagcacccttcgctgctgctccctgggaagctaaaaacggaaccagactacctg
gaggttctggagaaacagaccgccatgagccaactgtaa
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