Xiphophorus maculatus (southern platyfish): 102228106
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Entry
102228106 CDS
T02923
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102228106 (rnf13)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102228106 (rnf13)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102228106 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
zf-RING_16
Prok-RING_4
FeoB_associated
Hemotin
zf_RING_Vps8_fungal
Glucos_trans_II
zf-RING_4
DUF7027
PHDvar_NSD
PHD
RINGv
Neur_chan_memb
LapA_dom
zf-RING-like
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
102228106
NCBI-ProteinID:
XP_005800367
Ensembl:
ENSXMAG00000005738
UniProt:
A0A3B5RBK3
LinkDB
All DBs
Position
9:complement(11898382..11934193)
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AA seq
377 aa
AA seq
DB search
MLLSLGMLMLSATQVYTIFTVQLFAFLNLLPVEADITAYSFDNKTETFDDMPARFGYRLP
SDGLKGFLIGARPENACEPLDPPPRENLTGAFIVLIKRYDCNFDMKVLNAQKAGYKAAIV
HNVDSDDLISMGSNDLDVLKQIVIPSVFVSELTANALKDDYMYDKGGHLVLIPDFSLPLE
YYLIPFLIIVGICLILIVVFMITKFVQDRRRARRSRLRKDQLKKLPIHKFKKGDNYDVCA
ICLDEYEDGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSHGDSDSDSEEGDS
GPDENEVSESTPLLRSQASTSAHSFGTMSGASRSEQDSSEYDDDELDSSDSEEEVTVETV
VVQMQQPSSDEHDLPRA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtctctgggaatgctgatgctctccgccacccaggtttacaccatcttcacc
gtccagcttttcgccttcctcaacctcctgccagtggaggccgacatcactgcttactcc
tttgataacaaaaccgaaaccttcgacgacatgcctgctcggttcggctaccggctcccc
agcgatggacttaagggtttcctgatcggtgcccgacctgaaaatgcgtgtgagcccctc
gacccgcctcccagggaaaacttgacgggcgccttcatcgtcctcatcaagcgatacgac
tgcaacttcgacatgaaggtcctcaatgcacaaaaagctggatataaggcagccattgtt
cacaatgtggactctgatgacttaatcagcatgggatccaacgatttggatgttctgaag
cagatagttattccctctgtatttgtgagtgagctgaccgccaatgctctcaaagacgac
tacatgtacgacaaaggaggacacctggtcctgatcccagacttcagcctgcctctggag
tactacctgatccccttcctcatcatagtggggatctgcctcatcctcatcgttgttttc
atgatcacaaagttcgtccaggatcgacgcagagctcggagaagtcgtctgaggaaggat
cagctgaagaaacttcccatccacaagttcaagaaaggggataactatgatgtctgtgcc
atctgcctggatgaatatgaggatggagataaactcagagtcctgccgtgctctcatgcc
tatcacagcaagtgtgtggacccctggctgaccaaaaccaagaagacgtgtcctgtgtgc
aagcagaaggtggtcccctctcatggcgactcggattcggattcagaggagggggacagc
ggccccgacgagaacgaggtgtccgagagcacgcccctgctgcgctcccaggcctcgacc
agcgcccactccttcggcaccatgtcgggtgcgtcgcgctcggagcaggactcctccgag
tacgacgacgacgagctggacagcagcgacagcgaggaggaggttaccgtggagacagtt
gtggtgcagatgcagcagccgagctccgacgagcacgacttaccgcgagcttga
DBGET
integrated database retrieval system
