Xiphophorus maculatus (southern platyfish): 102228164
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Entry
102228164 CDS
T02923
Symbol
vcl
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04510
Focal adhesion
xma04520
Adherens junction
xma04810
Regulation of actin cytoskeleton
xma04820
Cytoskeleton in muscle cells
xma05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102228164 (vcl)
04520 Adherens junction
102228164 (vcl)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102228164 (vcl)
04810 Regulation of actin cytoskeleton
102228164 (vcl)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102228164 (vcl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102228164 (vcl)
04147 Exosome [BR:
xma04147
]
102228164 (vcl)
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102228164 (vcl)
Exosome [BR:
xma04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102228164 (vcl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
GIT1_C
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
102228164
NCBI-ProteinID:
XP_005794663
Ensembl:
ENSXMAG00000015558
LinkDB
All DBs
Position
10:complement(9160231..9190609)
Genome browser
AA seq
1066 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLSAPVAAVQAAVSNLVRVGKD
TVQTTEDQIMKRDMPPAFIKVENACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLSVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPILISGIKIFVTTKTSGSQGVEEALKNRNFTYEKMSAE
INEIIRVLQLTSWDEDAWANKDTEAMKRALGLIDSKMAQAKSWLRDPNAPPGDAGEQAVR
QILDEAGKVGELCAGKERRDILGTAKTLGQMTDQVSEMRARGQGASPAAMQKAQQVSQGL
DVLAGKAGNAARKLEAMTNSKQAIAKRIDAAQSWLADPHGSPEGEENIKALLNEARKIAD
MCEDPKEREEILRSAGELAAMTAKLSELRRQGKGDTPEARALAKQIATALQNLQSKTNKA
VANSRPAKAAVHLEGKTEQAQRWIDNPTVDDSGVGQAAIRGLVAEGRRLANALQGPYRQE
LMGKCEQVEQLMAQLADLAARGEGDSPQARAVAQQLQEALKDLKGKMQEAMTQEVSDIFS
DTTTPIKLLAVAATAPLDAPNRDEVFEDRAANFENHANRLGATAEKAAAVGTANKSTVEG
IQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTVLVDEAIDTK
SLLDASEEAIKKDLDKCRVAMNNHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EIVKAASDELSRTISPMVMNAKAVAGNIQDPNLQKGFLDSGYKILGAVAKVREAFQPQEP
DFPPPPPELDQLSLNDEAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEHKAGEKVNEPMMV
AARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggttttccacacgaagacgatagaaagtatcctggagccggtggctcagcagata
tcccatctggtgataatgcacgaggaaggtgaagttgacgggaaggctatcccagatctg
tccgcgccggtggccgccgtgcaggcggccgttagcaacctggttcgggttggaaaggat
accgtgcaaacaacagaggaccagatcatgaaaagggatatgccaccagcctttatcaaa
gtggagaatgcctgcacaaagctggttcaagctgcctccatgctgaaagccgacccgtac
tctgttcctgctcgggattacctcatcgatggatctcgaggcattctgtctggcacatct
gacctgctcctcacttttgatgaggcagaggtccgtaaaataatccgtgtgtgcaaaggc
atcttggaatatctgagcgtggccgaggtggtggagtcaatggaggacttgatcacatac
acaaagaatctggggccaggtatgacaaagatggcaaaaatgatcgatgagcgccagcag
gagctcacacatcaggagcatcgtgtgatgctggtcaattccatgaatacagtcaaagag
ctgctacccatcctcatctcaggtataaaaatctttgtgacgaccaagacatctgggagc
cagggtgtggaggaagccctgaagaaccgaaacttcacttatgagaagatgagcgctgag
ataaatgagatcatcagagtcctgcagctcacatcctgggatgaagacgcctgggccaat
aaggacactgaggccatgaagagggctctgggactgattgattcaaagatggctcaggct
aaaagctggttgagggatccaaacgctccaccaggggacgctggcgagcaggccgtccgt
cagatcctggatgaagccgggaaagtcggtgagctctgtgctgggaaggagcgcagggac
atcctgggaacggccaagactctgggtcagatgactgaccaggtgtctgagatgagggca
agaggtcaaggagcatccccggctgccatgcagaaggcacagcaggtttcccaggggctc
gacgttctggccggcaaggctggcaatgctgctcgcaaactcgaggccatgaccaactcc
aagcaggccatcgccaaaaggatcgacgctgcacaaagctggcttgcagacccccatggc
agcccagagggagaggagaatatcaaggccctcctcaatgaggccagaaagattgcagac
atgtgtgaggatcccaaagaaagagaagagattttgcgctctgctggagagctggccgcc
atgactgccaagctgtctgaactcagaagacagggtaaaggtgacactcctgaggcccga
gctttggccaagcagatagcaacagccctgcagaacctgcagtcgaagaccaacaaggct
gtggccaacagccggcctgcgaaggccgccgtccacctggaggggaagacggagcaggcg
cagcgctggattgacaaccccaccgtggacgacagcggtgtgggccaggcagccatccgt
gggctggtggccgagggccgccggctggccaacgctctgcagggcccgtacaggcaggag
ctgatggggaagtgcgagcaggtggagcagctcatggcgcagctggctgacttggccgcc
cgtggcgaaggggactccccgcaggcacgcgccgtggctcagcagctccaggaagccttg
aaagacctgaaaggaaagatgcaggaggcaatgactcaggaagtgtctgacatcttcagt
gacaccaccacccccatcaagttgctggcagtggctgctacagcgcccctcgacgctccc
aacagagatgaggtctttgaggacagagccgccaacttcgagaaccacgccaataggctc
ggcgccacggccgagaaggcggccgcagtcggcactgcgaacaagagtacagtggaggga
atccaggctgccgtcaagtcaaccagagatctaacaccacaagtggtgtctgctgctcgc
attctgctgagaaaccctggcaaccaagcagcatatgaacattttgagaccatgaagaat
cagtggattgacaatgtggaaaagatgactgttttggtcgatgaggccattgataccaaa
tctctgctggacgcctctgaggaggccataaagaaggacttggataaatgccgcgttgcc
atgaacaatcaccagcctcagatgctggtggccggcgccaccagcattgcccgaagagcc
aaccgcatccttctggtggcaaaacgagaggtggagaactccgaagatcccaaattcaga
gaaatagtgaaagctgcatcagatgaactgagccggacgatttctcccatggtgatgaat
gcaaaggctgtggctggaaatatccaggatccaaatcttcagaagggatttttggattcg
ggttataagattcttggagctgtagcaaaagttagggaggccttccagcctcaagagcca
gacttcccaccaccacctccggagctggatcagctcagccttaatgatgaagcagcacct
cccaagcctcctcttccagagggagaagttcctccacccagacctcctcctcctgaggag
aaagacgaggagttcccagagcacaaagctggagagaaagtcaatgagcccatgatggtg
gctgctaggcagcttcacgacgaagcccgcaaatggtccagcaaaggaaacgacatcatc
ggcgctgccaagcgaatggccctgctcatggcagagatgtcccgtttggtgcgtggaggc
agcggaaacaaacgcgccctgatccagtgcgccaaggacatcgccaaagcctctgacgaa
gtcacacggctggcgaaggaagtggccaagcaatgtaccgacaaacgaatcaggaccaac
ctgctccaggtgtgtgagcgcattcccaccatcagcactcagctcaaaatcttgtccact
gtcaaggccaccatgttgggccgtaccaacatcagtgaagaggagtctgagcaggcgact
gaaatgttggtccacaacgctcagaacctgatgcagtctgtgaaggagactgtcagagaa
gcggaggcggcctccattaagatccggacagatgcaggtttcaccctccactgggtcaga
aagaccccctggtatcagtaa
DBGET
integrated database retrieval system
