Xiphophorus maculatus (southern platyfish): 102228222
Help
Entry
102228222 CDS
T02923
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X2
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04120
Ubiquitin mediated proteolysis
xma04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102228222 (ube4b)
04120 Ubiquitin mediated proteolysis
102228222 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102228222 (ube4b)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102228222 (ube4b)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
U-box type E3
102228222 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
102228222
NCBI-ProteinID:
XP_005808269
Ensembl:
ENSXMAG00000011476
UniProt:
A0A3B5R0B0
LinkDB
All DBs
Position
1:complement(12715901..12731548)
Genome browser
AA seq
1184 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPTSQPSTPLSTPLTSPQRETPPGPLPGPSGVSPQPVPPAA
SQSLGLNVHSGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
PASCEKSMSQVDVDSGIENMEVEDSDRREKRNLTEKETSANSDVSEDQALHLICKILRVS
WKEQDRDVIFLPSLAADFHQNPKDVYSDFKDLISQILMEVLMMSSQSNVHNPFASLTATS
QPIAAAKSSDHRLTLVQPSSQGGSPMGPSAGSFGASSLSSLGACGGGMSCDSASDRFTIE
ACKETEMLNYLIERFDSVGMEERKAPKMCSQPNVSQLLSNIRSQCISHVALVLQGALTQP
RSPLQQSLLVPYMLCRNLPYGFIQELVRITHQEEEVFKQIFIPILHGLALAVKECSFDSD
NFKFPLMALAELCEIKFGKTHPVCNLATSLPLWCPKPLSPGCGREIQRLSYLGAFFSLSV
FAEDDTKVGDKYFSGPAITMENTRVVSQSLQHYLESARGDLFKVLHNILLNGETRELALN
YMAALVNYNVKKAQMQTDDKLVSTDGFMLNFLWVLQQLSMKIKLETVDPYYIFHPRCRLV
VSLEETRLKATMEELKSWMAELHEDPSKFSEPKFPTECFFLTLHTHHLSILPSCRRYIRR
LRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVRAKACADVGLLDENQ
LRRCLQFYSTVIQLILRMVDQAYPNITLPLNPEIPKSFAALPEFYVEDVAEFLLFVVQYS
PQVLYEPCVQDVVTFLVVFICSQHYIRNPYLIAKLVEVLFVTNPAVQPRTQRFSEMMENH
PLSIKHLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNS
GKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPREQQQSRQSQLTQD
ERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVE
NPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSSI
AIEKFKLLSEKVEEIVAKNSQSEMDYSDAPDEFKDPLMDTLMTDPVMLPSGNIMDRSIIL
RHLLNSPTDPFNRQPLTESMLESVPELKERIHAWMREKQGARPF
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagcgcagacgagattcgcagaaggcggctggcacggctggcaggagga
ccgacatcgcaacccagcacccccctaagcacccctctcacatccccacagagagagact
ccacctggacccctccctggcccctcaggcgtctcaccccaacctgtaccaccagctgcc
tctcagtcattgggtctcaatgtccacagtggtacccctgccacatcccctatgggcacc
tctggggtggcatatggtagtcagagcagcgaaggtgtaagctccctctccagctccccc
tccaacagccttgagacacagtctcagagtttgtctcgatcgcagagcatggacattgac
cctgcctcctgtgaaaagagcatgtcccaggtggatgtggactcagggattgagaacatg
gaggtggaggacagtgatcgcagggagaagagaaacttaactgaaaaggaaacttctgca
aactctgatgtctctgaagatcaggctctgcacttgatttgtaaaatcctccgcgtatcg
tggaaggagcaggacagagatgtcatctttctcccttcactagctgcagattttcaccag
aaccctaaagatgtgtactctgacttcaaagacctcatcagccagatcctgatggaagtc
ttaatgatgtcatcccagtcaaatgtccacaacccgttcgccagcttgaccgccacctct
cagcccattgcggcagcgaaatcctccgaccaccggctgacgctggtgcagccctctagc
caaggcggcagcccgatgggccccagtgctgggtcttttggagccagctctttgtccagt
ctgggtgcctgtggaggggggatgtcatgcgattcagccagcgaccgtttcaccattgaa
gcatgcaaagagacagagatgctgaactacctcattgagcgttttgacagtgttggcatg
gaggagaggaaagctcccaagatgtgcagccaaccaaatgtcagccagcttctcagcaac
attcgctctcagtgtatctcccatgttgcccttgtcctgcagggggctctgactcagcct
cggagccccctccaacagtctctgctggtaccttacatgctgtgtcggaaccttccgtat
ggctttattcaggagctggtgcgcatcacccaccaggaagaggaagtgttcaaacagatc
ttcattcccattctccatgggctcgctctggcagtgaaagaatgttcctttgacagcgac
aactttaaattccccctcatggcattagctgagctttgtgaaattaagtttggaaagact
catcccgtgtgcaacttggcaacatcacttcctctgtggtgtcccaaacctctgagccct
ggttgtggcagagaaattcagagactatcctaccttggggcgttctttagcctttcagta
tttgcagaggatgataccaaagtaggggacaagtatttctctggcccagccatcaccatg
gagaacacccgagttgtcagtcagtcgttgcagcactatctggagtcagcaaggggtgac
cttttcaaagttctccataatattctgctgaacggagaaacgcgcgagttagctctcaac
tacatggcagctctagtcaactacaatgtgaagaaagctcagatgcagactgatgacaag
ctggtttcgacagatggcttcatgctcaacttcttatgggtgctgcagcagctgagcatg
aagataaaactggagacagtggacccatactacattttccatccacggtgtcgccttgtt
gtcagcctggaggagactcgtcttaaagccaccatggaggagctaaaaagctggatggct
gagctgcatgaggatccctcaaagttctcagagcccaagtttcccaccgagtgttttttc
ttgacacttcacactcatcacttgtccatcctgccaagctgtcggcgctacatccgcaga
ttgcgcgccatccgtgaactcaacaggactgtagaggagctgaaaaacagtgagagccaa
tggaaagactctcccttggccagtcggcacagagaaatgctgaaacgatgtaaaacccag
ctcaagaaactggtgcgagccaaagcgtgcgctgacgtgggccttctggatgagaaccag
ctgcgcagatgtctgcagttttacagcacagtcattcagctcatacttcgcatggtggac
caggcctaccccaacattacccttcctttgaaccctgagattcccaaaagctttgctgct
ctgccggagttttatgttgaagacgtggcagagtttctgctttttgttgtgcagtactct
ccccaggttctatatgagccgtgtgtccaggatgttgtcaccttcttggtagtgttcatc
tgcagtcagcactacatccggaacccctaccttatagccaagttggtggaagtgctgttt
gtcaccaaccctgctgtacagcctcgcactcagagattctctgaaatgatggagaaccac
ccgttgtccatcaaacacctggtccctgctctcatgaagttttacactgacgttgagcac
actggtgctaccagcgagttctacgataagttcactatacggtaccatatcagtaccatc
ttcaagagtctctggcagaacattgcccaccatggcaccttcatggaggagttcaactct
ggcaagcagtttgtgcgctacatcaacatgctgattaacgacaccaccttcttgttagac
gagagccttgagtccctgaagcgcatccatgaagttcaggaagagatgaagaataaggag
cagtgggatcagctgcccagagagcagcagcagagccgccagtcccagctgactcaggac
gagcgagtgtctcgctcttatctggcgctggctacagaaacggttgaaatgttccacatc
ctaaccaagcaggttcagaagcctttcctcaggcctgagctcggacctcgtttagctgct
atgctgaactttaaccttcagcagctctgtgggcccaagtgccgggacctgaaggtggag
aacccagagaaatatggctttgagcccaaaaagctcttggaccagctgacagacatctac
cttcaactggattgcgcccgctttgctaaagcgattgcagatgaccagcgatcatacagc
cgggagctttttgaggaggttatttccaagatgagaaaggctggtattaagtcctctatt
gccattgagaaattcaagctgctatctgagaaggtggaagaaatagtcgccaagaactcc
cagtcagagatggactacagcgacgcacctgatgagttcaaagaccctctgatggacact
ctgatgactgacccggtgatgctgccctctgggaacattatggacagatccatcatcttg
cgccacctgctgaactcccccactgatcccttcaacaggcagcccctcacagagagcatg
ctggagtcagtgcctgagctgaaggagagaatccatgcctggatgagggagaaacagggc
gctcggcctttctaa
DBGET
integrated database retrieval system
