Xiphophorus maculatus (southern platyfish): 102228223
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Entry
102228223 CDS
T02923
Name
(RefSeq) polypyrimidine tract-binding protein 1-like
KO
K13218
polypyrimidine tract-binding protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102228223
03041 Spliceosome [BR:
xma03041
]
102228223
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
102228223
Spliceosome [BR:
xma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102228223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
102228223
NCBI-ProteinID:
XP_023195239
Ensembl:
ENSXMAG00000005582
LinkDB
All DBs
Position
9:complement(29896984..29926541)
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AA seq
561 aa
AA seq
DB search
MAGVALRQAQSFLQEDKPRFPERRQSSVHHDITVGTKRGSDELFSSVSNGPYIMSTTANG
NDSKKFKGDIRGPSLPSRVIHIRKLPSDITEAEVISLGLPFGDVTNLLMLKAKNQAFLEM
NSEEAAQNMVGYYSTMMPVIRHQPVYLQFSNHKELKTDNSPNQERAQAALRALSSSHVDT
LMAAPSTVLRVVVENLLYPVTLDALCQIFSKFGTVLRIIIFTKNNQFQALLQFSDGSSAQ
AAKLTLDGQNIYNGCCTLRISFSKLTSLNVKYNNEKSRDFTRPDLPSGDSQPALEHPAMA
AAFAPGIISAAPYAGATHGFPPAFAIQPAMSSAYPGLTLPALPGALASLGLPATARLGFP
SIPAGHSVLLVSNLNPERVTPHCLFILFGVYGDVMRVKILFNKKENALVQMCDSTQAQLA
MSHLNGQRLHGKPLRITLSKHTSVQLPREGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIF
PPSATLHLSNIPPSVVEDDLKMLFSSSGAIVKAFKFFQKDHKMALIQMGSVEEAIDCLIT
FHNHDLGETHHLRVSFSKSSI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgtggcgctgcgccaggcgcagagctttctccaggaggacaagccgaggttt
cctgaaaggaggcaaagcagtgtccaccacgatataacagttggtactaagagaggatct
gacgagcttttctccagcgtctccaacggcccgtatatcatgagcaccacagccaatggc
aacgacagcaagaagttcaaaggtgacataagaggccccagcctgccgtcgcgggtcatc
cacatccgcaagcttcccagcgacatcacagaggccgaggtcatcagcctgggcctgccg
ttcggcgacgtcaccaacctgctgatgctgaaagccaagaaccaggccttcttggagatg
aactcggaggaagcagctcagaacatggtgggttattactccactatgatgcccgtcatc
cgacaccaacccgtctacctgcagttctccaaccacaaggagttaaaaacggacaactcc
cccaaccaggagagggcccaggcagctctgagggccctcagctcctcccatgtggacacg
ctaatggcagctcccagcacggtgctgagggtggtggtggagaacctgctctaccccgtc
accctggacgccctctgccagatcttctcaaagttcggcactgtgctgcggatcatcatc
ttcaccaagaacaaccagttccaggcgctgctgcagttttcagacggctcatctgcccag
gcagccaaactgactctggatggacagaacatctacaacggctgctgcaccctgaggatc
agcttctccaaactcaccagcctcaacgtcaaatacaacaacgagaagagccgggacttc
acccggccggacctgccgtccggagacagccagcccgccctggagcacccggccatggcc
gccgccttcgctccaggaatcatttctgcggcgccgtacgccggagcgacgcacggcttc
ccgccggcgtttgcgatccagccagcaatgtcctccgcctacccgggcctgacgttgccg
gctctccccggagcgctggcctccctgggcctccccgccaccgccaggctgggcttcccc
tccatccccgctggacactcggttctgctggtcagcaacctgaaccctgagagagttacg
ccccactgcctctttattctcttcggtgtttatggagacgtgatgagagtgaagatcctg
ttcaacaagaaggaaaacgctctggtccagatgtgtgacagtacccaggctcagctagcc
atgagccacctgaatggccagcggctgcatgggaaacctctccggatcacactgtccaaa
cacaccagcgtccagcttccccgtgaaggacatgaggaccagggcctgaccaaagactac
agcaactccccgctgcaccgcttcaagaagcccggctccaaaaactattccaacatcttt
cctccctccgccaccttgcacctctccaacatccccccttctgtggttgaagacgacctg
aagatgctgttttccagctctggagccatcgtcaaggccttcaagttcttccagaaggac
cataagatggctctgatccagatgggttcggtggaggaagccatcgactgcctcatcacg
ttccataaccacgacctgggcgagacacaccacctgcgtgtctccttctccaagtcatct
atctga
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integrated database retrieval system
