Xiphophorus maculatus (southern platyfish): 102228270
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Entry
102228270 CDS
T02923
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1-like
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
102228270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102228270
Membrane trafficking [BR:
xma04131
]
Endosome - Golgi transport
Others
GGA
102228270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
SMN_YG-box
HEAT_Maestro
ARM_6
Hrs_helical
PCRF
LMBR1
Motif
Other DBs
NCBI-GeneID:
102228270
NCBI-ProteinID:
XP_023190459
Ensembl:
ENSXMAG00000005095
LinkDB
All DBs
Position
5:19978933..19989650
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AA seq
642 aa
AA seq
DB search
MAAAPSDETSLQSLINKATNPLNKETDWDNIKAFCDKLDNEPDGPQLATRLLAHKIQSPQ
EWEAMQALLVLETCMKNCGNKFHGEVGKFRFLNELIKVVSPKYLGSRAPELVKAKVLEMM
YSWTVWYPDEAKIAEAYQMLKKQGIVKQDPVLPGDKPLPPPPPRAKTAIFEDEEKSKMLS
GLLKSTHPDDLRAANKLIKEMVQEDQKRVEKVSKRVNAIQEVKESVSLLSQLLDGYSKES
YSHSNQELVRDLYQRCEKMRPTLFRLASDTEDNDEALADILEANDSLTQVINLYRQLVKG
EEVSKDGTSLASQQGGSSALLDLTGLNISENTEPSNPQAAPQSLGLSLLDDELMSLGLNV
SENCDSNIISQSLNIAESSAPAVALQPAVVQTSQATPVGGCTATPRAMEELDLLGKTLLQ
QSLPPESQQVKWDKLQPHSKVPLRDLQAKSGASSRPAAGPGPTSGLLVQSEQPDGVLHSS
LGIADKSSSSSVDPNDRISLADVTVPLESIKPSSVLPVTVFDKHSLRVLFTFACDCPPSR
PDVLVVIISMLSSAPIPVTNIRFQAAVPRVMKVKLQPPSCTDLPAFNPILPPAAITQILL
LANPHKEKVRLRYKLTFNLGDKSHDESGDVDEFPPPDSWGNL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccccttctgatgagactagccttcagtctctaatcaacaaggccaccaat
cctctcaataaggaaactgactgggacaatatcaaggcattttgtgataaactcgacaat
gaaccagatggccctcagcttgcaaccagacttcttgcccacaaaatccagtctcctcag
gagtgggaggcaatgcaagcactactggtgcttgagacgtgtatgaagaactgtggaaac
aagttccatggtgaagtgggaaagtttcgctttcttaatgagctcatcaaagtggtatcg
cctaagtatttaggatcccgggctccagagctggtgaaggcaaaggtgttggagatgatg
tacagctggaccgtgtggtatcctgatgaggcaaagatagctgaagcttatcagatgctg
aagaaacagggcattgtaaagcaagatcctgtgcttcctggtgacaagccactcccacct
cctccacccagagccaaaactgccatctttgaggacgaggagaaatccaagatgctgtct
ggcctgttgaagagcacccaccctgatgatttaagagcagcaaacaagctcatcaaggaa
atggttcaagaagaccaaaagcgagtggagaaagtttccaagcgagtgaacgccatccag
gaggtgaaggagagcgtgagcttgctgagccagctgctggacggctacagcaaggagagc
tactcccatagcaaccaggagctcgttagggatctttaccagcgctgcgagaagatgaga
cctacactattcagattagcgagcgacacagaagacaacgacgaagctctagccgacatc
ttggaggccaacgacagcctgacgcaggtcatcaatctgtacaggcagctggttaagggt
gaggaggtgtcgaaagacggaacgtctctcgcctctcaacaaggtggcagctcagcacta
ttagacctgacaggactcaacatttcagaaaacacagaaccttccaacccacaggctgca
cctcagagcctgggcttgagcctcttggatgatgaactcatgtctcttggattgaatgta
tcagaaaactgtgactctaacatcatctctcagtccttaaatattgcagagtcttcggct
ccggctgtagcgctgcaaccagctgtggtgcaaacatcacaggctacaccagtagggggc
tgcactgctacgccaagagcaatggaagagctggatttgctggggaaaacattgttacag
caatctctacctccagagagccagcaggtgaaatgggataaactccagcctcactctaag
gtccctttgcgagatctccaagcaaagtctggggcgagctccaggcctgctgctggtccg
gggccgacgtccggcctcctcgtccagtcagagcagcctgatggcgtcctccactccagt
cttggcattgcagacaaaagctcgtcatcatctgttgaccccaacgaccgcatctcatta
gcagacgtcacagtgcctctagagtcaatcaaacctagcagcgtgttaccggtgactgta
ttcgacaaacacagcctaagggttttgttcacgtttgcatgcgactgtcctccgtcgagg
cccgacgtgttggtggtgatcatctccatgctgtcctcggcacccattcccgtcaccaac
atccgtttccaggcagccgttcccagagtaatgaaagtaaagctgcagcctccctcctgt
actgacctgccagccttcaaccccatcctccctccagccgctatcacacagattctgctg
ttggccaaccctcacaaggagaaagtgcgtctgcgctacaaactaactttcaacctggga
gataaatctcacgatgagtccggcgacgtggacgagttcccacctccagacagctggggc
aacctttag
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