Xiphophorus maculatus (southern platyfish): 102228385
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Entry
102228385 CDS
T02923
Name
(RefSeq) nuclear receptor ROR-alpha-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102228385
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xma03310
]
102228385
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102228385
Nuclear receptors [BR:
xma03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
102228385
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102228385
NCBI-ProteinID:
XP_014327638
Ensembl:
ENSXMAG00000018442
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Position
4:complement(2209709..2259048)
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AA seq
530 aa
AA seq
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MESSRQDSVTDAVSSRSQPGEAAAETPLPAAGRTHSRSDSSGSSQSKGLSAAVKKTHASQ
IEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNASYSCPRQKNCQIDRTSRNRCQH
CRLQKCLAAGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQAPSRTSLSVGSPSPDEA
EPPSPPYTLCSAGLTDPADDPACYTDRTTPDGVSLTAKAESGAGDTRCGGFYLDIQPSPD
QSGLDINGIKPEPLYDYGHGDDFFPYCSFSNGDASPTLTLAEHDHLAQIICKSHLETCQY
LREELQEMSWQRFLQEEVEKYQNKPQEAMWQLCAVKITDAVQYVVEFAKRIDGFMDLCQN
DQIVLLKAGSLEVIFVRMCRVFDSQNNTVYFDGKFASPDVFKSLGCDDLISSVFDFAQSM
CSLQLTEEEFALFSAFVLLSADRSWLREKLQVEKLQRKTESALQHVLQKNRRDDGVLEKL
RCKASALRALCGLHSEKLAAFRTVYPDAVRTLFPPLYKELFAADLDGTLH
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtcccgacaggattcggtgactgacgcggtaagcagtcgctcgcagcccggt
gaagccgccgcggagaccccgctccccgcagcgggcaggacgcacagccgctccgactcc
tccgggtccagtcaaagcaaaggtttgtcagcagctgtgaagaagacgcacgcttctcag
attgagatcatcccctgtaagatctgtggagataaatcctcagggatccactatggcgtc
attacctgcgagggctgcaagggtttcttcaggcggagtcagcagagcaacgcctcgtac
tcgtgtccacggcagaaaaactgtcagatcgaccgaacgagccggaaccgctgccagcac
tgtcgcctgcagaaatgcctggctgccggcatgtccagagacgctgtgaagttcggccgc
atgtcgaagaagcagcgggacagtttgtacgccgaggtccagaagcaccggctccagcag
cagcagcaggcgcccagccggacctccctcagcgtcggcagccccagcccggacgaggcc
gagccgccgtcccccccgtatacgctgtgctccgcgggcctcacggacccggcagacgac
ccggcctgctacacggaccggaccacaccagacggagtatctctgaccgccaaggcagag
tcgggagcaggagacacaagatgtggaggtttctacctggacatccagccgtctccggac
cagtccggactcgacatcaacggaatcaaaccggagccgctgtacgactacggacacggc
gacgacttcttcccttactgctccttcagcaacggagacgcttctccaaccctgactttg
gccgaacacgatcacttggctcaaatcatctgcaagtctcacctggagacgtgtcagtac
ctgagggaggagctgcaggaaatgagctggcagagattcctgcaggaagaggtggagaaa
tatcagaacaagccacaggaggcgatgtggcagctttgtgcggtgaagatcacagacgcc
gtccagtacgtggtggagttcgccaagcgcatcgacggtttcatggatctctgccagaac
gaccagatcgtgctgctgaaagccggatctttagaggtcatcttcgtacgaatgtgtcgg
gtttttgactcccagaacaacaccgtctacttcgatgggaaatttgcaagtcctgacgtt
ttcaaatcattaggctgcgatgatttgatctcgtcggtgtttgacttcgctcagagcatg
tgttcgctgcagctgaccgaggaagagttcgccctcttctccgcgttcgttctgctctct
gcagaccggtcgtggctgcgggagaagctgcaggtggagaagctgcagcggaaaaccgag
tcggccctgcagcacgtcctgcagaagaaccgcagagacgacggagttctggagaagctg
cggtgcaaggcgtcggcgctgcgcgctctctgcggcctccactcagagaagctcgcggcg
ttcagaaccgtctacccagacgcggtccgaacgctcttccctccgctctacaaggagctg
tttgctgccgacctggacgggactctgcactga
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