Xiphophorus maculatus (southern platyfish): 102228428
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Entry
102228428 CDS
T02923
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xma03400
]
102228428 (apex2)
Enzymes [BR:
xma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
102228428 (apex2)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
102228428 (apex2)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Exo_endo_phos2
Motif
Other DBs
NCBI-GeneID:
102228428
NCBI-ProteinID:
XP_023185369
UniProt:
A0A3B5Q3K5
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Position
1:24367456..24372499
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AA seq
560 aa
AA seq
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MKLVTWNINGIRTFKSGIKMALDSLDADIICVQETKVTRDLLDERTAIVDGYNSYFSYSR
GRSGYSGVATYCRDSATPSAAEEGLTGLLTNHEGAVGCYGDHRDFSSEELQLLDNEGRAV
ITQHKIMGQDTEQTVTVINVYCPRADPDKPERKQFKLQFYKLLQCRAEALLKGGSHVIVL
GDVNTSHQQIDHCDPRDIEDFAENPGRKWLNSFLYNSVQEEEEHHKKSETTDCVQMGKFI
DIFRYFHPTRTNAFTCWSTLTGARQTNYGTRIDYIFADHRLAQEQFSGADIMPEVEGSDH
CPVWAHLKCSLLPCSKPPPLCTRYLPEFAGKQQKLSRFLVKVDQKSKEALPGSQEEEEKR
ENMNPFCGDSKKRSLASESAAPKGKKSKTTNTSSKPQGNLLSFFKPKLTDLKPCENTPGL
DQFTSSHSKPKASATSELRSGTGGTTEHTELVVDAPSQLCTSSAAGETGSAVKAKQPASG
LPEGQSDVKKGASSVFWKSVLHGPPPAPCCKVHREPCVLRTVRKDGPNMGKQFFVCGRPQ
GHASNPEARCNFFMWVEKGK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcacctggaatattaacggcatcaggacgtttaaaagcgggataaaaatg
gctcttgatagcctggacgcagatataatttgtgttcaggagacaaaagtcacaagagac
ctgctggatgaacggacggctattgttgacggctacaactcgtatttcagctacagtcga
ggacgcagcggttattcaggtgttgcgacttactgcagggatagtgccactccttctgct
gctgaagagggactcacaggcctgctcaccaaccatgaaggagctgttggatgctatggt
gaccaccgtgacttttcaagtgaagagctgcagcttttggacaatgaggggcgagccgtc
atcacgcagcacaaaataatgggtcaagacacagagcagactgttaccgtaataaatgtc
tactgcccacgcgctgacccagacaagccggagcgaaagcagttcaagctgcagttctac
aagctgctacagtgtcgggccgaagcgttattaaaaggcgggagccatgtcatcgtttta
ggagatgtgaatacttctcaccagcagatagatcactgtgacccaagagatattgaggat
tttgctgagaatcctgggaggaaatggctgaatagctttttgtacaatagcgtccaagaa
gaggaagaacatcataaaaaatcagagacaacagattgtgtccaaatgggaaaatttata
gacatcttccgttactttcacccaactcgtaccaacgccttcacctgttggtccactctc
actggagcccgacagactaactacggcactcgtattgattatatatttgcggaccaccgg
ctggcccaggagcagttttcgggggcagacattatgccggaggtggagggctccgatcac
tgtcccgtttgggcgcacctgaaatgttcgcttcttccctgctccaaacctcctcccctc
tgcactcgctacctgcctgagtttgccggcaagcagcagaaactctctcgcttcctggtg
aaggtggaccagaagtcgaaggaagctttacctggatcccaggaagaggaggaaaagagg
gagaacatgaacccgttttgtggcgacagtaaaaaacgatcattggcgtcagaatctgct
gccccaaaggggaaaaagtcaaagacaacaaatacctcatcaaagccgcagggtaacctc
ctttcttttttcaaacccaaactcacagatcttaaaccatgtgaaaacacacctggtctg
gaccaatttacctcatcacacagcaagccaaaggcatccgcaaccagtgagctgcgttca
ggaacgggcggcacgaccgaacacactgagcttgttgttgacgctccgtcccagctgtgc
accagcagcgccgcaggagaaacaggcagcgcggtgaaggccaaacagccggcctctggg
ctccctgaggggcaatcggatgtcaagaagggggcatcatctgtgttttggaagtctgtg
cttcacgggccgcccccggccccctgctgcaaggtgcacagggagccctgtgtgctccgt
actgtgagaaaagacggcccaaacatgggcaaacagttctttgtgtgtggacggcctcag
ggacacgcttccaaccccgaggctcgctgcaacttcttcatgtgggtagaaaaaggaaag
taa
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