Xiphophorus maculatus (southern platyfish): 102228505
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Entry
102228505 CDS
T02923
Name
(RefSeq) thrombospondin-2-like isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04145
Phagosome
xma04510
Focal adhesion
xma04512
ECM-receptor interaction
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102228505
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102228505
09144 Cellular community - eukaryotes
04510 Focal adhesion
102228505
09142 Cell motility
04820 Cytoskeleton in muscle cells
102228505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102228505
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xma04147
]
102228505
00536 Glycosaminoglycan binding proteins [BR:
xma00536
]
102228505
Membrane trafficking [BR:
xma04131
]
Endocytosis
Phagocytosis
Opsonins
102228505
Exosome [BR:
xma04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102228505
Exosomal proteins of colorectal cancer cells
102228505
Exosomal proteins of bladder cancer cells
102228505
Glycosaminoglycan binding proteins [BR:
xma00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102228505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_CCN
TSP1_CFP_C
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
102228505
NCBI-ProteinID:
XP_014325859
Ensembl:
ENSXMAG00000016191
LinkDB
All DBs
Position
10:10662125..10679938
Genome browser
AA seq
950 aa
AA seq
DB search
MWPLRDFPWLLIPLCAVALCAGVDGAKVYNGSAEMCHHPCDELLDLITEIHGLRIVTNNL
LEDLERVSKENEGMRISLAELSNDSSTVDGDEEDNYLDRDRDGEVWCMQDGRVYEQGDVW
DVDSCTSCACQDGKVVCKQVLCPPVSCISPSFVDGKCCLVCLEDEDGWSPWSEWTHCSVT
CGRGGQQRGRSCNGISGCAGPSLQTRSCSLMKCDRKGRTDGNWGLWSPWSACTTSCGEGD
ITRVRMCNNPPPSKGAKGCKGNARETKPCNNTVCPVAGGWTAWSEWSQCSTSCGGGLISR
RRECLNPAPQNGGKPCAGEAADYEACNKQPCPVDLCLLSNPCFPGVKCTSMSDGSWECGD
CPVGLKGNGTHCKDENECEVDEVCFTKCVNTDPGFYCLPCPPRYKGNQLYGLGLQEARRT
RQVCEPYNPCKENTHTCHQFADCIYLGLASEVLFKCSCAVGFAGDGSVCGEDSDLDGWPN
ESLPCKQNATYHCEQDNCPMLPNSGQEDFDKDGQGDACDPDDDNDNILDERDNCPLRYNP
RQFDSDGDGVGDSCDNCPFDSNPKQTDTDGNGEGDACSIDIDGDEKLNERDNCPSIYNTD
QRDTDLDGVGDQCDNCPLLHNPLQVDSDSDLVGDLCDNNEDIDEDGHQNSLDNCPYIANS
NQADHDKDGKGDVCDHDDDNDGIPDDRDNCRLVPNRDQLDSDGDGSGDACFDDFDNDNIP
DALDPCPLNQDIGVTDFRKFQGVLLDPKGTTQSDPLWVIRSQGTELLQKANSDPGIALGY
DKFSAVDFSVTFYVNTNRDDDYAGIVFAYQSTSRFYVVMWKQVSQGYWEQRPSKAFATAG
LSIKLVQSSTGPGEYLRNALWHTGNTRHQVRTLWHDPNKIGWKDFTAYRMHLIHRPKTGF
IRVVVYEGRGILADSGAVYDHTLAGGRLGLFVFSQEQVIFSDLKYECRDN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtggcctctcagagacttcccctggcttttaattcccctgtgtgcagtggctttgtgc
gcaggtgtagatggtgcgaaggtgtacaatgggtcggcggaaatgtgtcaccatccttgc
gatgagctgctggatttgatcaccgagatccacggtctgcggatcgtgactaacaacctg
ctggaagatctagagagagtatcaaaagaaaatgaggggatgcgaatatccttggctgag
ctgagtaacgacagcagcacagtcgacggagacgaggaggacaactatttggacagggac
agggacggggaggtgtggtgcatgcaggatggacgagtgtacgagcagggggatgtctgg
gatgttgacagttgcacctcctgtgcttgccaggatggaaaagtggtgtgtaagcaggtg
ctgtgtcccccagtctcctgcatcagtccatccttcgtggatggaaaatgctgccttgtg
tgtctcgaagatgaagacggttggtccccgtggtctgagtggacccactgctctgtcacc
tgtggacgaggagggcagcaacgaggtcgatcttgcaacggcatcagcggctgtgctggg
ccctcacttcaaacccgcagctgctcactgatgaagtgcgaccgcaaaggacgcacagat
gggaactggggcctttggtctccttggtctgcatgcacaacctcatgtggtgaaggcgac
atcacacgggtccgtatgtgcaacaatcctccaccatccaagggggccaagggctgtaag
ggaaacgctagagagacaaaaccatgcaacaacacagtctgccctgtcgcaggaggctgg
acagcctggagtgagtggtcgcaatgttcaacttcctgtggtggaggacttataagccgc
cggcgggagtgtttgaaccccgcccctcagaatggcgggaaaccttgtgctggggaagct
gcagactacgaagcatgtaacaaacagccatgccctgttgatctgtgtttgctttcaaat
ccatgttttcctggggtgaaatgcacatcaatgagtgacggatcttgggaatgtggagat
tgtcctgttggtctgaaggggaatggcacgcactgcaaagatgaaaatgagtgtgaagtg
gatgaggtgtgttttacaaaatgcgtgaacacagatcctggattctactgccttccttgt
cctcctcgatacaaaggcaaccagctgtacggccttggattgcaggaagccaggagaacc
aggcaggtgtgtgaaccatataatccttgcaaagaaaacacacacacttgccaccagttt
gctgactgcatatacctgggcctggcatcagaggtcttgtttaaatgctcgtgtgctgtt
ggctttgctggcgatggctctgtgtgtggtgaggactctgatctggatggttggcccaat
gagagtctaccctgcaagcagaatgccacatatcactgtgaacaggacaactgccccatg
ctgccaaattctggacaagaagactttgacaaggatggacagggggacgcctgtgatcct
gatgatgacaatgacaacatcctagatgagagggacaactgcccgctgaggtacaaccct
cggcagtttgactctgatggggacggggtcggggattcctgcgataactgtccgtttgac
agcaacccaaagcagacagacaccgatggcaatggagaaggagatgcctgcagcatcgac
attgatggagatgagaaactgaatgagcgtgacaactgtccttctatatacaacactgac
cagagggacaccgatctggatggtgttggagatcagtgcgacaactgtccccttctacac
aacccactgcaggttgactctgacagtgacctggtgggggacttgtgcgacaacaacgag
gacatcgatgaagacggacaccaaaactctctggacaactgtccctacattgccaacagc
aaccaggccgaccatgacaaggatggaaagggagatgtttgcgaccatgacgatgacaat
gacgggatccccgatgaccgggacaactgcagactggttcccaatagagatcagctggac
tccgatggtgacggcagtggagatgcatgctttgacgactttgacaacgacaatattcca
gatgcactggatccctgtcctctcaaccaggatattggggtgacagacttcaggaagttt
cagggcgtattactggaccccaaaggtaccacgcagtctgaccctttgtgggtgattcgc
agtcaagggacagagctgctgcagaaagccaactctgaccctggaattgctttagggtat
gacaagttcagtgctgtggacttcagtgtgacattttatgtgaataccaaccgtgatgac
gattatgcagggattgtgtttgcttatcagtccactagtcggttctacgttgtcatgtgg
aaacaggtgtctcagggttactgggagcagaggccctccaaagctttcgccacagcagga
ttgtcaataaaactggtccagtctagcacaggaccaggcgagtatctgcgtaatgctcta
tggcacactggaaacacaagacaccaggtcagaacattgtggcatgaccccaataaaatt
ggctggaaggacttcacagcatatcgcatgcaccttatacaccgacccaagactgggttc
atcagggtggttgtgtatgagggcaggggcattctggctgactcaggggcagtttatgac
cacaccctggctggaggcagactgggactgtttgtcttctctcaggaacaggtcatcttc
tcagatctaaaatatgagtgcagagacaactga
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integrated database retrieval system
