Xiphophorus maculatus (southern platyfish): 102228528
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Entry
102228528 CDS
T02923
Symbol
slc24a1
Name
(RefSeq) sodium/potassium/calcium exchanger 1 isoform X1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
102228528 (slc24a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xma02000
]
102228528 (slc24a1)
Transporters [BR:
xma02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
102228528 (slc24a1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
DUF4667
BUD22
Motif
Other DBs
NCBI-GeneID:
102228528
NCBI-ProteinID:
XP_023201301
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Position
2:complement(8540904..8547078)
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AA seq
744 aa
AA seq
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MMHCHRRKRLQLSRVLFLLSGVFLCTLYQLTISARLQAPMPVAQIGEDFGEGSTEGVEDA
TAEPGQLEEPLTTAPKLELTDQTTPTHVIPHTDKDLNTNTHMDLTSDYKEASSTESTLLP
TTNRTLVHCIYVAPEPPLVTPTPVPAPPVTTVSPAPPGEAPHVKGEYPEDIFSIEDRRRG
WVLLHIVGMMYMFVSLAIVCDEFFVPALGVITDKLAISDDVAGATFMAAGGSAPELFTSL
IGVFIAHSNVGIGTIVGSAVFNILFVIGMCALFSREILHLTWWPLFRDVSFYILDLILLI
IFFLDNVIMWWESMILVACYSLYVVFMKFNVQLEREFKTQLHKHKSIVKVIAVEEPEKTN
GEGEDNAPPAPEDKNRLKLKPSLQRGGSSASLHNSTMRNTIFQLMIHTLDPLGDGKFKDK
VETLNSVARRKSEPKSQGKSEGKSGKTEETKEPEAAPAKDAEKKEEPGAKKVLPTHDLLT
FEKPRSQSLIPVYDDIPAEQGGSEDSDDSDSDDDDSDEESEESSEDEDEDEDEEEEKEDD
PLSLQWPDTPLKQVTYLFLLPIVFPLWLTVPDVRNQKSRKFFVLTFLGSIMWIAIFSYLM
VWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDIT
MGLPIPWLLYSFIHGLAPVAVSSNGLFCAIVLLFLMLLFVIISIAACKWKMNKVLGFTMF
LLYFIFLVLSVMLEDRIIVCPVSI
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgatgcattgtcatagaaggaaacggctccagctgagccgggttctgtttcttctctcc
ggagtttttctctgtaccctctaccagctcaccattagtgccaggctgcaggcaccaatg
ccagtggctcagattggagaggattttggagaagggtcaacagagggcgttgaggatgcc
acagcagaacctggccagctggaggaacctctcactactgcacccaaattagagctcaca
gatcaaacaacaccaacgcatgtgattcctcatactgataaggatttaaatacaaacaca
catatggatttaactagtgattacaaagaagcctcttccactgaatccacactgttgcca
accacaaaccggactttggtgcattgcatctatgtggccccagaacctcctctggtgaca
cccaccccagttccagctccaccagttacaactgtctccccagctccacctggtgaagct
cctcatgtcaaaggtgaataccctgaagacatcttttctatcgaagatcgcagacgagga
tgggtgcttcttcacattgtgggaatgatgtacatgtttgtctctcttgcgattgtctgc
gacgagttctttgtgcccgcactgggagttatcactgacaaactggccatctctgatgat
gtagcaggcgccacctttatggcggccggaggctctgcacctgagctcttcacctctctt
ataggagtcttcatcgcccacagcaacgtgggcattggcacaatagtcggctcggcagtt
tttaacattttgtttgtgattgggatgtgtgctttattttctcgggagattcttcatcta
acctggtggccacttttcagagatgtttcattctacatacttgacctcatcttactgatc
atcttcttcttggacaatgtcattatgtggtgggagagcatgatactggtggcctgttac
agtctctatgttgtctttatgaagttcaatgtgcaactggagcgagaattcaagacccag
ctccacaaacacaagagcattgtgaaggttattgctgtggaagaacctgaaaagacaaat
ggggaaggagaagataatgcccctcctgctccagaggacaagaatcggttaaagttgaag
ccgtcccttcagcgaggggggagttctgcatctttacacaacagcaccatgagaaacacc
atctttcagctcatgattcacacattagaccctctgggagatggaaagtttaaggataag
gttgagaccttgaacagtgtggccagacggaagtcagagcccaagtcccaagggaaaagt
gaaggcaaaagtggaaaaactgaggagaccaaagagccagaggctgccccagccaaagat
gcagaaaagaaggaggagccaggagcaaagaaggtactccctacccatgacctgctgact
ttcgaaaagcccagaagtcagtctttgatacctgtctatgacgatattccagcagaacaa
ggtggatcggaagattcagacgattctgacagtgacgacgatgacagcgatgaagagagt
gaggagtccagtgaagatgaggatgaagatgaagatgaagaggaggaaaaagaagatgac
ccactgtctttacagtggcctgacacaccactcaaacaagtcacctacctcttcctgctg
cccatagtctttcctctgtggctcacagttcctgatgttcggaaccagaaatccaggaaa
ttttttgtgctcaccttcctgggctcgattatgtggattgctatcttctcctacctcatg
gtatggtgggctcatcaggtgggagagaccatcggcatctcagaggaaattatgggcctg
actatcctggcggcaggcacctccatccctgaccttatcaccagtgtgattgtggctcgt
aagggcctgggagacatggcggtgtccagttctgtgggcagtaacatctttgacatcaca
atgggcttgcccatcccatggctcctgtactctttcatccacggtttggctccagttgct
gtcagcagcaacggccttttctgtgccatcgtgctgctcttcctcatgctccttttcgtc
atcatctccatcgcagcctgtaaatggaaaatgaacaaggtactgggcttcactatgttt
cttctctactttatcttcctggtgctcagcgtcatgctggaggatcgcatcattgtctgc
cctgtttccatctga
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