Xiphophorus maculatus (southern platyfish): 102228573
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Entry
102228573 CDS
T02923
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102228573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102228573
03021 Transcription machinery [BR:
xma03021
]
102228573
03036 Chromosome and associated proteins [BR:
xma03036
]
102228573
Transcription factors [BR:
xma03000
]
Eukaryotic type
Helix-turn-helix
ARID
102228573
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102228573
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102228573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
102228573
NCBI-ProteinID:
XP_023203041
Ensembl:
ENSXMAG00000009940
LinkDB
All DBs
Position
15:3888529..3911297
Genome browser
AA seq
1893 aa
AA seq
DB search
MDASLGSDSNSSNNNPPPTGTSSQFNHYYGNGRGGPCFDQHGGQQSPGTGVTAAAHTVHG
TMDQVHNSHEGYSNNSPYNHYPNYRAGYGSGGYGGMMSPSRQGNSLMGPAAANPAKAAMV
AASSPAGGGGGGFQRFPGQGQQHPSGATPTLNQLLTSPSPMMRGYGGGYSDYSNPAVQQH
QSGVGPAEDTGSQYGSAAAHGWGGQQRSHPGHNGPSSGRSQVAPMDPMAMKRSQLYGMSN
SPYSQQQGAPYPGQPYSSPSPHRYPMGMSGRGQMAMGGMQYPQQQMSSQYGQQQQQNLSF
SQPGQSPYFSPSQQQPAAPSQPPYLQPCPLPPQEVPQEAYGGRGKSAAMTPGKSNQEDLS
QQERPSSLPDLSRSIDDLLTGTEAAVSSGASGSGSAQGDQGTPGARSPFSPHVSPRLPPL
ARTGPSPSPSLSPAGSRSGPLSPTSSSGPGPQVSGSDVGPHSSQSAMTPDRGFPPSMQRS
NQGPHFGPLSPHPASAGPGLHGSYQQGSYGPPGTYPRPPHYGGTPAAGYSGPGSGPSLAN
SMGLNTAGPMHGQGPSTPSGRGPGPGAGGRPYMTAPGTAAPTSPNMPQAAGQGMGPPGAT
ASCKPPDMGINSGPNANASLSAHSRQGSYSSMAAMRVSGGSGAPFSSSGRMNPQGPPYTA
PGLGMMASDGTGSHDLKQRVELRDAVGSAADPTKMKQDSYSSQCVVPPPGAACPMSPSPA
SVLSCVGEDSDSVGSPSWIRTPSSPQKPNVATMTNEKITKLYEMGSEPDRRLWVDRYLAF
MEDRETPVANLPAVGRKPLDLCRLYMAVRAIGGLAMVNKNKKWRELSSLLSVGTSSSSAS
SLKKQYIQYLFAYECKMERGEEPPPDAGAGDAKKPLQVKGQPPSPANSGSFQGPNTPLSS
SSSLTDAPVDPKPPTRSSTPHNQMAPQPGNRTMGGVSVQDPFSEGSDPAFHSKRGPGPCG
GPYQQGAVGPTGSVGPTEPAMRMQYDGSTDLYGAPRKGPVPGEAFGQSQMPGGAMQDMFP
RGPSSGPLSGMGPRPQYPYGPGYDRRLDRVMGPEGSMAPPGGQNSMGPSANEASMYPPNR
YPQQRHGHDGFGQQYPHSMAFGSHQPLYPQQQGYKRPMEAMFPAAKRHEGEAFGVQQYGS
QQSDPFGPYGSGPGGFSGPERRPVTGQYQYPYGRDRQGLPQHGMMGSAPAAAADGGPQPS
LWPPRTEMGFSYSRQGQGPPFPDQEGRPPPDAQWPPSNLNQCQPPFPSHSSSSSSSSMPP
LPSRQPPSSFQATPTIPNHVTRPQSPSSFPRPPVGSLSPNGAPYLPVKKPGVPTVPPANQ
GLPLVYREVVFPPGSVEATPPKLKPRRRLTAKDTGTPEAWRVMMSLKSGLLAESTWALDT
INILLYDDGTVGSFSLTLLPGFLELIVEFYRRCLIQMFGILQEYEIGAEGPKATPKDPGE
APSPLNKEDAKPEDSPQQSSKYDKWPVRVEEAGESWAEVERRADPTRTNGFISGLLHWKA
GGGDSTAHIQTHFEPRSGDFRPPEQEKQSEGVEEQRTEEEEQKQTGHQGGSPSEVRGQRP
APAEAQNPISLQEDEPRCWDEAPLSTAESWQDSLARRCICVSNIIRSLSFIPGNDAVLSR
HPGLVLILGRLVLLHHSHPRRKRAPPTYQREEEAGRACSRDEWWWDCLAALRENTLVTLA
NVSGQLDLSQYPEDIVLPVLDGLLHWMVCPSAEAQDPFSGAAALSPQRLVLECLCKLSVQ
DCNVDLLLATPPFSRQQQLFATLVRLVGERRSQVCREMAVAVLSNLARGDATAARAVALQ
KGSVGTLIGFLEDSLAVAQYQQNPHAAVPPPEPPSINMMCRAAKALLAVASVEENRPEFV
LYESRLLDISLSSALNSAVAAIMCEVLFKLSRS
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggatgccagcctgggatcagacagcaacagcagcaacaacaaccctcctccgactggg
accagctcccagtttaatcattattatgggaatggaagaggagggccttgctttgatcaa
catggcggacaacaaagcccagggactggggtaacagcggcggcacacacggtacacggc
accatggaccaggtccacaactcccacgaaggctacagcaacaacagcccgtacaaccac
tatccgaactaccgagcgggctacgggagcggtggctacgggggcatgatgagcccctca
cggcaggggaacagcctgatgggcccggccgccgctaacccagccaaagcggctatggtg
gccgccagttctccggctggaggaggcggaggaggattccagcggtttcccggacagggt
cagcagcacccttcgggggctacgccgactttgaaccagttattaacgtctccgagcccg
atgatgcgcggctacggaggcggatattcagattacagtaatcccgctgtacagcagcac
cagtcgggtgtggggccggcggaagacacgggctctcagtacggatcagcagcagcgcat
ggttgggggggacaacagaggagtcacccgggtcacaacggaccgagcagcggcagatct
caggtggcgccgatggacccgatggcgatgaagcgctctcagctttacgggatgagcaac
agcccgtactcccagcagcagggggcgccgtaccctggacaaccctacagctccccatcg
ccccacagataccccatgggaatgtctggcagggggcagatggcaatgggagggatgcag
taccctcagcagcagatgagctcccagtacggccagcagcagcaacagaacctgagcttc
agccagccgggccagtcgccatacttcagcccctcccagcagcagccggccgcccccagc
cagccgccgtacctgcagccctgcccgctgccgccccaggaagttcctcaggaggcgtac
ggggggcggggcaaatctgcagcaatgactcctgggaaatcgaaccaggaggacttgagc
cagcaggagcggccgtccagtctgccggatctctcccgctccatcgatgacctcctgacc
ggcactgaggcggcggtgagttcaggggcctccggttccggcagcgctcagggcgaccag
gggaccccgggggcccgctctcctttctccccccacgtttcgccacgcctcccccctctg
gcccgaacgggtccctctccgtccccgtccttatcccctgccgggtcccgctcggggccc
ctgtcccccaccagcagcagcggtccaggcccccaggtgtctggatcagacgttggcccc
cactcctcccagtcggccatgactccagaccgaggtttccctccctctatgcagcgtagc
aaccaggggccccattttggccccttgtccccccacccagcatcggccggccccgggctc
cacggctcctaccagcagggctcctacggccccccaggtacctaccctcggccccctcac
tacggcgggacccctgctgccggctacagcggccccggctcgggccccagcctggctaac
agcatggggctgaacaccgctggccccatgcacgggcagggcccctccaccccgtcgggc
cgaggtcccgggcccggagccgggggccgcccctacatgactgcacccggcaccgcggcg
cccacctcccccaacatgccgcaggctgccggccagggcatggggcccccaggggccaca
gccagctgcaagccgccagacatgggcatcaactctggaccgaacgccaacgcctccctc
agcgctcacagcaggcagggcagctactcatctatggcagcgatgagagtttctggaggt
tctggagctccgttcagcagctcaggcaggatgaaccctcagggcccgccttacaccgct
ccaggattagggatgatggcgtcagacgggacaggaagtcatgacctgaagcagcgggtc
gagctccgagacgccgtcggttctgctgctgatccaaccaaaatgaagcaggacagctac
agctcgcagtgtgtggttccgccgcccggcgccgcctgcccgatgtcccccagcccggcc
agcgtgttgtcctgtgtgggagaagacagcgacagcgttggcagcccctcctggatcagg
accccgtccagcccacagaagcccaacgtggcgaccatgaccaacgagaagatcaccaag
ctgtacgagatgggcagcgagccggaccgccgcctgtgggtcgaccgctacctggccttc
atggaggacagggagacgcccgtcgccaacctgccggccgtcggcaggaagccgctggac
ctgtgccggctctacatggcggtgcgagcgatcggcggcctggccatggtgaacaaaaac
aagaagtggcgggagctgtcgtcgctgctgagcgtcgggacgtccagcagctcggccagc
tccctgaagaagcagtacatccagtacctgttcgcctacgagtgcaagatggagcgaggg
gaggagcctccgcccgacgctggcgccggggacgctaagaagcccctgcaggtcaagggt
caaccgccctctcctgcgaattcaggctcgtttcagggccccaacacgcccctgtccagc
agctcctccctcaccgacgctccagttgacccgaagcccccgacccgctcgtccaccccg
cacaaccagatggctccccagcctggaaacaggaccatgggaggcgtgagcgtccaggac
ccgttctccgaaggcagcgacccggccttccacagcaaacggggcccggggccctgcggg
ggcccctaccagcagggggctgttggtccaacgggttctgttggaccaacagaacccgca
atgagaatgcagtacgacggcagcacagacctgtatggagccccgaggaagggtccggtt
cccggcgaggccttcggtcagagccagatgcccggtggtgcgatgcaggacatgttcccc
cgcggaccctcctccggccccctgtcagggatggggcccaggccgcagtacccctacggc
cccggctacgatcgcagattggaccgtgtgatgggcccagagggaagcatggcgccccct
ggcggccagaacagcatgggcccatctgccaatgaagccagcatgtatccccccaacaga
taccctcagcagaggcacggacacgatggttttggtcagcagtatcctcacagtatggcc
ttcggttcccatcagcccctttacccccagcagcagggctacaagcgtccgatggaggcc
atgttcccggctgcgaagcgtcatgagggcgaggcgttcggcgtgcagcagtacggctcc
cagcagtcggacccttttggcccctatggatctggaccgggggggttttcaggccccgag
cgccggcctgtcaccgggcagtaccagtacccatacggtcgggaccgccagggcctccca
cagcatggcatgatgggatcggcccctgcggcagcggcggacggggggccgcagcccagc
ttgtggccccccaggacagagatggggttctcgtacagccggcagggccaggggcccccc
ttccccgatcaggagggccggcccccaccggacgcccagtggccccccagtaacctcaac
cagtgtcaacctccctttccttcccactcttcttcctcctcttcttcctccatgcccccc
cttccctccaggcagcccccctcctctttccaggccacgcccaccatcccaaatcacgtg
acccgcccccagagcccctcgtcattcccccggcctccggtgggctccctgtcccccaat
ggcgccccctacctgcctgttaagaaaccaggggtccccaccgttcccccagccaatcag
ggcctccccctcgtttacagagaggtcgttttcccgcccggctccgtggaggccacgccc
cccaagctgaaaccgcggcgacggctaacggcgaaggacacaggaacgccggaggcctgg
cgggtgatgatgtcactgaagtcggggctcctggcggagagcacctgggcactggacacc
atcaacatcctgctgtacgacgacggcacggtgggctcgttcagcctgacgctgctgccc
gggttcctggagctcatcgtggagttttatcgccgctgcctgatccagatgttcggcatc
ctgcaggagtacgagatcggggccgagggcccgaaggcgacccccaaagacccgggggag
gcgccgtcgccgctcaacaaagaggatgccaagcctgaggattcccctcagcagagcagc
aagtacgacaagtggccagtcagggtggaggaggccggggagagctgggcggaggtggag
cgccgggccgacccaacccgaaccaacggcttcatcagcggtctgctgcactggaaggcc
ggaggaggagactccacggctcacatccagacgcactttgagccccgatccggagacttc
aggcccccagagcaggagaagcagagcgaaggagtggaggagcagcgaacagaggaggag
gagcagaagcagactggtcatcaaggaggttctccatctgaggtcagaggtcagcgccca
gcccctgctgaggctcagaatcccatcagcctccaggaggacgagccgcgctgctgggac
gaggcgccgctgtccaccgccgagtcgtggcaggactccctggccagacgctgcatctgc
gtctccaacatcatccgcagcctctccttcatccctggcaacgatgccgtcctgtcgcgc
cacccgggcctggttttgatcctgggccggctggtgctgctgcaccacagccacccgcgc
aggaagcgggcgccgcccacctaccaacgggaggaggaagcgggccgggcctgcagccgc
gacgagtggtggtgggactgcctggcggcgctgcgggagaacacgctggtgacgctggcc
aacgtgtcgggccagctggacctgtcgcagtaccctgaggacatcgtcctgccggtgctg
gacgggctgctgcactggatggtctgtccgtccgccgaggcgcaggacccgttcagcggc
gccgcggcgctttcgcctcagcggctcgtcctggagtgcctctgcaagctgagcgtccag
gactgcaacgtggacctgctgctggccacgccccccttcagccgccagcagcagctcttc
gccacgctggtgcgcctggtgggcgagcgccgcagccaggtgtgccgggagatggcggtg
gccgtgctgtccaacctggcgcgcggcgacgccacggcggcccgggctgtcgccctgcag
aagggcagcgtgggaactctgatcggcttcctggaggacagcctggccgtggcgcagtac
cagcagaacccgcacgccgccgttccgccgccagagccgcccagcatcaacatgatgtgc
cgcgcggcgaaggcgctgctggccgtggcgagcgtggaggagaaccggccggagttcgtc
ctgtacgagagccggctgctggacatctcgctgtcgtcggccctcaactcggcggtggcg
gccatcatgtgcgaagtgctgttcaagctgagccgctcgtga
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integrated database retrieval system
