Xiphophorus maculatus (southern platyfish): 102228690
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Entry
102228690 CDS
T02923
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102228690 (chd9)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102228690 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
102228690
NCBI-ProteinID:
XP_023188383
Ensembl:
ENSXMAG00000016192
LinkDB
All DBs
Position
4:8117836..8214162
Genome browser
AA seq
3004 aa
AA seq
DB search
MDFFDDPNLFVGGLDGLDEDGFHSAPSLVDELNLSAGFEPLQVEVLGPGKHQEMMPPVSS
QQAVPSYNQPMVHYTGVKAENPLGQVFSGSRNTGCDVGPEQHGQYHSATISQVPQPNGLY
CSTGSPMWGNQDQNGNMFHHVSQQQQQQQQLCHQQLHNQQLHGRQHTQQQHRSGHQAEQQ
QRMRQQLQRQHSHQQQLLNQHQQITTASVCLQQQQHPTFSFLQGGQSSSQQQIHHSQHQL
PVRESQFHSRSLPGKPFLERQNASLSGACLQARQQQGSYQLVRGGPTFSGSGLEDSHLSF
PIHPSSAVHSLPACSVNSAHAYQAAEFPAYPGEPEIPSLSQQSSCRPITTTPITTTVPRL
PGTACQFQSTAHVSQLHSGTTVSQADECPFRALHCSGETQAVCKSSELFGESVSCYPSMT
NHLPSEQQISCGVINTNGYQAFGDNIMPSEAQDGDLEALDPPDLLPDLLPQLEDAFRQQD
ESSCSWFDSSQKKGHENRKSTAIECKEEKPRKNPNGPSSQVRVLSPPVKSSSSSSSSSSS
SSSSSSSSSSEKRVPRRTHHQMESNLHEKQEKANRIISEAIAKARQRGEKNIPRVMSPES
FPTSSSQYKSHREREHKGNGKARTKEKSSRKACIVPSSKPKQKTKIGKIVIKIGKRKKRK
PESSEEESDDDPPPRHSSKDDDSKRRSNRQVKRKKYAEELEARLSDEDVKVIVKAKKSNT
AASKDPAVQLFVENPTEEDAAIVDKIMSSRIMKKEVSPGVMVEVEEFFVKYKNYSYLHCE
WATEQHLEKDKRIQQKIKRFKMKQAQRALFFTDMDEEPFNPDYVEVDRVLEVSYCEDKDT
GEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFERLQAVKPDSRRVERPPANLWKKRE
QSREYRNGNTLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIHRIGIKG
PFLIIAPLSTIANWEREFHTWTHLNVIVYHGSMISRQMLQQYEMYFRDAQGRVIRGAYKF
QAVITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKLMNLEHKVLLTGTPL
QNTVEELFSLLHFLEPARFPSENNFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKK
LAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQSNMPNLVNTMMELRKCCNHPYL
IKGAEEKILEDFREVHNPTAADFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVR
CLDILEDYLIQKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA
ADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKA
VLQSMSGRDNSLGGGTGGGAAQQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEEDIDQI
LQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKADIDMDMVNGRNS
LVIDTPRVRKQTRPFSATKDELAELSEGESDSDETKPKLRRNDRLNSYGRTECFRVEKNL
LVYGWGRWKDILNHGRFKKQLTEWDVESICRALLAYCLVHYRGDDKIKSFMWDLIAPTED
GRTKELQNHLGLSAPVPRGRKGKKMKTQTSSFDIHKAEWLRKHNPEHMLQDDGYKKHLKH
HCNKVLLRVRMLYYLKQEVIGSQAQKVLDGGDSSEVKIWVPDPDHSELPALWWDAVADKC
LLLGVFKHGYEKYNTIRADPTLCFLDRVGRPDEKAIAAEQRGNDFMDGDVDDPEYKPAPA
LLKDDMEDDASSPGDLVVSDNAGDAPPVTEGQTSYWPSPSVLTARLRRLITASQRYTKSR
QILHIHQTQSQSQPQQAMMLSAPICPLPPALKDTLNPKMAAKIERQQRWTRREEADFYRV
VSTFGVVFDPNLGRFDWTKFRAMARLHKKTDESLQKYLCAFTAMCRRVCRLPPKDGDSAV
DPSLTIQPITEERASRTLYRVELLRQVREQVLRHPLLFERLSLCQMSSDLPVWWEAGTHD
RDLLIGAAKHGVSRTDYHILRDPDLCFMAAQRNYSQVKAAQQQQQRTTTPLLLPQYQAAG
PLPTGSPLPPPTQRDPDPCGIVPKVEAASEEEEIKERQGESWSPPQPPATPTGLEEKPVS
VVKDSERQMVAARTKPLTPNSTERKPKKASKRGRREARRGSESDSDGSSSSSSSRSSSSS
SSSSSSSSHSGSSSSSSSSSCSSGSSSSSSSSSSSSDDSESEGEEAKKKVPVTTSVKGFD
EDSVASLSTTQDEMQDSHVSENGVTNNSTHPFQGGGYMLAASYWPKDRVIINRLDSICQA
VLKGKWPGHRRVYEPGSTVASFYTTKLLDNANSLCEDPSASPQGSKVTKHVAENKEFSVK
LNDQEGGLKLTFQKQGLPIKRPLESEEGPQAQQQYLARLHELQSASDTGLADITKPQSSF
QTVTPGVSGQMRLNGVMDGQPVVKKRRGRRKNVEGMELLFMNRNKSSATPDPVAPGWGGI
GQVGITGAAAQMNSSQIPADTDTRIPVINLKDGTRLAGDDAPMRKDLDQWLREHPGFVAD
TGAFIPGVGKMQMQFHFQDGRPKQKRHRCRNPNKIDVNSLTGEERVQIINRRNARKIGGA
FAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPK
NPLAKAAVAAAAAAAPSSAPSALGLNSLLANGLLSGMDLGSLQAFQQNLQSLQSLQLTAG
LMGLPPDASNLAASNLAAMFPMMLSGMAGLPNLLGMSSMLGKPTQEAAGGSEEKTKGTDS
SGTCEPSNAPSNTSETKGERTEDVNTTPSSTSSSASSATVTPSASAASAATSHPLSLNPL
LLSSMLYPGMLLTPGLNLPVSATQLQSSNSDPSTLPSAAAAPLPSAPAASHSSLTEMEQP
SGKEEEEEDEAPEEALDDEEEDDEESAEPRENSGPEGSAKAESSSSESGSSSSSSDDSDS
SDED
NT seq
9015 nt
NT seq
+upstream
nt +downstream
nt
atggacttttttgacgatcccaacctctttgtcgggggtttggatgggctagatgaagat
ggtttccattcagcaccgtcgcttgtggatgagctcaatctcagtgctggttttgaaccc
cttcaagtggaggtacttggcccagggaagcatcaagaaatgatgccaccagtctcttcc
caacaagctgtgcccagttacaaccagccgatggttcattatactggcgttaaggcagag
aatcccctggggcaggtattttctggttctcgaaacacaggttgtgacgtgggtcctgag
caacatggccagtaccacagtgccaccattagccaagtacctcaacccaacgggctgtac
tgcagtactggaagcccaatgtggggcaaccaagaccaaaatgggaacatgtttcaccat
gtatctcaacagcagcagcagcaacaacaactttgtcatcagcaactgcacaaccagcaa
cttcatggcagacaacatactcagcagcagcaccgttctggtcatcaagctgagcagcaa
cagagaatgcgtcaacagctccaacgacagcacagtcatcagcaacagctgctaaaccag
catcaacagattaccacagcgagtgtttgcctgcagcaacagcagcatcccacattctcc
tttctccagggaggtcagtccagcagccagcagcagatacaccattctcagcatcaacta
cctgtaagagaatcccagtttcattccaggagtcttccaggtaaaccttttttggaacgt
cagaatgcctctttgagtggggcctgcttgcaagcacgtcagcagcaggggagctaccag
ttggtcaggggaggtccgaccttctccggatcaggactcgaggactctcacctttcattc
cccatacatccatcatctgcagtacactccttgcctgcatgctctgtcaattcagctcat
gcttaccaagcggcagagttccctgcctaccctggagagccagaaatacccagtctcagt
cagcagtcttcatgtaggcccatcactactacaccaattactactacagtgcctaggctg
cctgggacagcatgccagttccagtccacagcacacgtgagtcagctgcactctggaaca
acggttagccaggcagacgagtgtcccttcagagccttacactgttctggagaaacccag
gcagtctgcaaatcatcagagctgttcggcgagtcagtgagttgctatccaagcatgaca
aaccacctaccctctgagcagcagatcagctgcggggttattaacactaatgggtaccaa
gcttttggagacaatattatgccatcagaggcacaggatggagacttggaagccctggat
cctcctgacctcctgcctgatctgctcccccagctggaggacgctttcaggcagcaggac
gaatccagctgttcttggtttgattccagtcagaagaaagggcacgaaaacaggaaatca
acagctatcgaatgcaaagaggagaagcctcgaaaaaaccccaatggtcccagtagccag
gtgcgggtcctcagtccccctgtgaagagcagctcttcctcctcctcttcctcttcttct
tcgtcttcatcctcatccagctcctcatcggagaagagggtgccacggaggacacaccat
cagatggagtcaaatctgcatgagaagcaagagaaggccaataggataatatcagaagcc
atcgccaaggcccgacagcgaggagagaagaacatcccacgagttatgagcccggagagc
ttccccacctcttcttctcagtacaagagccaccgtgagcgcgagcacaagggaaacggg
aaagcccggaccaaagagaaatcctcccggaaggcctgcattgtaccctcctcaaagccc
aagcaaaagaccaagatcgggaaaattgtcatcaagattggaaaaaggaaaaagcgaaag
ccagagtcgtcagaggaggagtcggatgatgatcccccgcctcgtcactcttctaaggat
gatgattctaagaggcggtcgaaccgtcaggtgaagagaaagaagtatgctgaagagctg
gaggccagattgtcagatgaggatgtcaaagttattgtgaaagccaagaaaagcaacact
gctgcatccaaggaccctgctgttcagctgtttgttgagaatccgacagaggaggatgct
gctattgttgacaaaatcatgtcttctcgtatcatgaagaaggaggtatctccaggggta
atggtagaagtggaagagttttttgtaaaatacaaaaactactcctacctccattgtgaa
tgggccactgagcagcacctagaaaaggacaagaggattcagcagaagatcaaacgcttc
aagatgaaacaagcacagagggcgctcttcttcacagatatggatgaggaacctttcaac
ccagactatgtggaagtcgacagagtgctcgaagtgtcgtactgcgaggacaaagacaca
ggagaggaagtggtgtactacctggtgaagtggtgttctctgccttatgaggacagcacg
tgggagctgaaggacgacgtcgatcagagcaagattgaagagtttgaacggctgcaggca
gtcaagccagactcgcgcagagtggagcggcctccagccaacctttggaagaagagggag
cagtcgagggagtacaggaatggcaacactctcagggattaccagctggagggggtcaac
tggcttcttttcaactggtacaacaggcgcaactgcatcttggctgacgagatgggcctg
ggaaagaccatccagtcaatcacattcctggaagagatccatcgtatcggcatcaaaggg
ccctttctcatcatcgcccccctctctactattgcaaactgggagcgagagtttcatacc
tggactcaccttaatgtcatcgtttaccacggcagcatgatcagcaggcagatgctgcag
cagtatgagatgtatttcagagatgcacagggtcgggtgattcgaggtgcctacaagttc
caagctgtgatcaccacgtttgagatgatcctgggcggctgtcccgagctcaatgccatc
gagtggcgctgtgtgatcatcgacgaggcccatcgtcttaagaacaagaactgcaagctg
cttgagggcttcaaactcatgaacctggagcacaaggtcctactgacgggtacgcctctg
caaaacacagtggaggagctttttagtctcctccacttcctggagccggcacgcttcccc
tctgagaacaacttcatgcaggagtttggtgacctcaagacagaggagcaggtgcaaaag
cttcagggcatcctgaagcccatgatgctgcgtcgtttgaaagaagacgtggagaagaag
cttgctcccaaagaggaaaccatcattgaggtggagctcaccaatatccagaaaaaatac
tatcgcgccatcctggagaagaatttctccttcctggctaaaggagctggccagtcaaat
atgcccaacctggtcaacaccatgatggaattaagaaagtgttgtaaccacccctacctc
ataaaaggggcggaagagaagatcctagaggatttcagggaagtacacaatcccactgcc
gctgactttcacctgcaggcgatggtgcagtctgctggaaagttggtcctcattgacaaa
ctgctgcccaagatgaaagcaggaggacataaggtgctcatcttctcccaaatggtgcgc
tgtctggatatcttggaagactacctcattcagaaaaggtacttgtatgagcgcatcgat
ggacgcgttcgtggaaacctgcgtcaggctgccattgaccgcttcagtaagcccgactcg
gaccgctttgttttccttctgtgtacgagagctggaggcctaggcatcaacctcaccgca
gcagacacctgcatcatctttgactctgactggaaccctcaaaacgacctgcaggctcag
gctcgctgtcatcgaatcggtcagaacaaggcggtgaaggtgtaccgtcttatcaccaga
aactcatacgagcgagaaatgttcgaccgcgccagcctgaagctgggactggacaaagca
gtgctgcagagcatgagtggccgtgacaatagtcttggaggaggcacgggaggaggggct
gcacagcagcagttgtccaagaaagagattgaggatctgttgcgacgtggcgcctatgga
gccatcatggatgaggaagacgaaggggccaaattctgtgaggaggacattgaccagatc
ctccagcgtaggacgaagactatcacaattgagtctgagggacgaggatccacttttgcc
aaggccagctttgtagcatctggaaaccgcacagacatctctctggatgaccctaatttc
tgggacaagtgggccaagaaagctgacattgatatggatatggtcaatggcagaaacagc
ttagtgatcgacactcctcgtgtaagaaagcagacgagacctttcagtgccaccaaagat
gagttggcagagctgtcagagggtgaaagtgacagtgatgagaccaagcctaagctcaga
agaaacgatcgcctcaacagttacggccgcacagagtgcttcagagtagagaagaatttg
cttgtatatggatggggtcgatggaaagacatcctcaaccacggtcgctttaagaagcag
ctgactgagtgggacgtggagtccatatgcagagcccttctagcttactgcctggtccat
tatcggggcgatgacaaaataaagagcttcatgtgggacctcatagcgccgactgaagac
gggcgcaccaaggagctgcagaatcacctcggcctgtctgccccggtacctaggggcaga
aaaggcaaaaagatgaagacccaaactagttcttttgacatccacaaagctgagtggctc
cggaaacacaaccctgagcacatgctgcaggatgatggctacaagaagcatctgaaacat
cattgcaacaaggtgctgctccgggtcagaatgctctactacctgaaacaagaggtgata
ggaagtcaggcccagaaggtgctagacggcggggactccagtgaggtaaagatctgggtg
ccagatccagaccactcagagctgccagccctttggtgggatgcagtcgccgataaatgt
ctgctgctgggtgtctttaagcatgggtatgagaagtacaacactattcgtgcagaccca
actctgtgcttcttagaccgcgtcgggcgaccggatgagaaggccatcgctgcagagcag
agaggcaatgacttcatggatggggatgtggatgatccagagtacaagcctgctccagct
cttctgaaagacgacatggaggatgacgcctcttcccctggagatttggtcgtctctgat
aatgctggagacgcacctccagtgacggaaggccagacttcctactggccctccccctca
gtgttgacggccagactgagacgactgatcacggcgtctcagcgctacaccaagagccgg
cagatcctacacatccaccagactcagtcccagtctcaaccccagcaggccatgatgctc
tctgcccccatctgcccgctgccccccgcactcaaagacacactcaaccccaagatggct
gcaaagattgaacgccaacagaggtggacaaggcgagaagaggccgatttttatcgggtt
gtgtccacttttggtgtcgtttttgacccgaacctcgggcgatttgactggaccaagttc
agggccatggcccggctgcacaagaaaacggacgagagccttcagaaatacctctgcgcc
ttcactgctatgtgtagacgagtgtgtcgcctgccacccaaagatggagattctgcggtg
gatccatccctgaccatccagccaatcacagaagagcgagcctctcgtaccctgtacaga
gtagagctgcttcgccaggtcagggaacaagtcctcagacatccactgctgtttgaacgt
ctgtccctgtgccagatgagctccgacttacccgtgtggtgggaggccggaactcacgac
cgcgacctgctgatcggcgccgcaaagcacggcgtcagtcggacggattaccacattctg
agagaccccgatctgtgcttcatggcagcccaacgcaactacagccaggtgaaagccgca
cagcagcagcagcaacgcacaacaaccccgctcctgctccctcagtaccaggctgccgga
ccgttaccgacgggctccccactgcccccgcccacccagagagacccagatccctgtggg
attgtgcctaaagtggaagcagcctcagaagaagaggagattaaagaaagacagggggag
agctggagccccccgcagcctccagcgactccgacaggcctggaggagaaacccgtttct
gtggtgaaggacagcgagaggcagatggtggcggcgcgcaccaagccgctcacacccaac
tcaacagaaaggaaacccaagaaggcgagcaaaaggggccgcagggaggcccggcgaggc
tctgagtcagactcagacggttcctcctcgagctcttcatcacgatcttcttcatcctca
tcttcatcttcttcatcctcctcacattccgggtccagctcttcctcttcctcctcatct
tgctcctctggctcttcgtcgtcatcgtcctcctcctcctcctcttctgatgacagtgaa
agcgagggagaggaagcaaagaagaaagtgcctgtaacaacaagtgttaagggttttgat
gaggacagcgtggcgtccctgagcaccacacaggacgaaatgcaagactcacatgtgtct
gagaatggagtcacaaacaactccacccatcctttccagggtggaggttacatgttggct
gcatcatactggcccaaggaccgtgtgataatcaaccgtctggacagcatctgccaggcc
gtgctcaagggcaagtggcctggccatcgtcgggtttacgagcccggcagcacggtcgcc
tccttctataccaccaaactgctggacaacgccaacagcctgtgcgaggacccctctgcc
tctccacaggggtcaaaggtgaccaagcatgttgcagaaaacaaggagttctcagtaaag
ctcaatgatcaggaaggaggtctgaagctgaccttccagaagcagggcttgcctataaag
agacccctagagtctgaggagggcccccaggcccagcaacagtatctggcccggcttcat
gagttgcagagcgcttcggacacaggcctggcagacataaccaagcctcaaagctctttc
cagactgttactccaggtgttagtggtcagatgaggttgaacggagtaatggacggccag
ccagtggttaagaagcgacgggggagaaggaagaatgtagaaggaatggagctgctcttc
atgaacaggaataaatcatctgctactcctgacccggtggctccaggatggggtggaatt
ggccaggtgggcatcacaggagctgctgcacaaatgaactccagtcagatccctgcagac
acagacaccaggatccccgtcatcaacctgaaggacggcacccgactggcaggcgacgac
gctcccatgaggaaagacctagaccagtggcttagggaacacccaggctttgtcgcagat
acaggagcttttatcccgggagtaggtaagatgcagatgcagttccacttccaagatggc
cgacccaagcagaagcggcaccgctgcaggaaccctaacaagatcgacgtcaacagttta
actggcgaggaaagagtccagatcataaacaggagaaatgctcgcaagatcggtggagct
tttgctcctcctctgaaggatctgtgccggttccttcaggaaaatccagagtatggggtc
ccacctgaatgggctgacgtggttaaacagtcgggttatctccctgagagcatgtttgac
cggatcctgactggacctatcgttcccgaggaggtgagccgacgaggacgccgaccgaag
aatcccctggccaaggcagcggtggctgcggcggctgcagcggcacccagctctgcacct
tccgccctgggtttaaattccctgctggctaacggtctcctctctggcatggacctcggc
agtctgcaggccttccagcaaaacctccaaagtttacagtccctgcagctcactgcaggc
ctcatgggactgccgccagatgccagcaacctggccgcgagcaatcttgccgccatgttt
cccatgatgctttctggtatggccggattgccaaacctgctcggcatgagcagcatgctt
ggaaagcctactcaggaagctgcgggaggttccgaagagaagacgaagggaaccgacagc
agcggaacatgcgagccgtctaatgccccctctaacacttcggaaaccaaaggagaaagg
acagaggacgtaaacacgactccttcctccacttccagttctgcttcctctgccaccgtc
acaccaagtgcttcagctgcctctgcagccaccagtcacccactctctcttaaccccttg
ttactctccagtatgctttatccagggatgcttctcactccaggccttaaccttcctgtg
tctgccacacagctgcagagctcaaacagtgacccttcaacccttccatctgctgctgct
gctcctcttccgtctgcccccgcagcctcccattcctccctgactgaaatggagcagccg
tcaggaaaggaggaagaggaggaggatgaggcgcctgaggaggctttggacgacgaggaa
gaggatgacgaggaatctgcagaaccgagagaaaacagcggccctgaaggttcagcaaaa
gccgagtcatcttcgtcggagtccgggagctcgtcctcatcctctgatgattcggactcc
agtgacgaggactga
DBGET
integrated database retrieval system
