Xiphophorus maculatus (southern platyfish): 102228775
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Entry
102228775 CDS
T02923
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04510
Focal adhesion
xma04512
ECM-receptor interaction
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102228775 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102228775 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102228775 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_N
Laminin_B
Laminin_II
Laminin_G_3
Laminin_I
Transcrip_act
Motif
Other DBs
NCBI-GeneID:
102228775
NCBI-ProteinID:
XP_023182602
Ensembl:
ENSXMAG00000012024
LinkDB
All DBs
Position
21:complement(24474685..24498276)
Genome browser
AA seq
3083 aa
AA seq
DB search
MKVLLLLMVVLMERAAAQHRGLFPAIFNLASNAEISSNATCGDPEPEVYCKLVEHVPGRR
IKNPHCPRCDANSILTKERHPITNAIDGTNQWWQSPSIKNGRQFHWVTITLDLNQIFQVA
YIIIKAANSPRPGNWILERSLDGVTFDPWQYYAISDSECLHRYNITPRFGPPTYKTDTEV
ICTSYYSRLNPLEHGEIHTSLINGRPGADDLTPDLLNFTSARYIRVRLQRIRTLNADLMT
LSVHDPRDVDPIVTRRYFYSIKDISVGGMCICYGHAQSCPLDPVTKKLKCVCEHNTCGEN
CNECCPGYHQLPWQPGTLSEGNTCEKCNCHNKASDCFYNQTVSDLGLSLNRHGVRQGGGV
CIDCQQNTTGTNCENCRDGYYRPAEASPYSDFPCVECSCDLRGSRSSVCRRDNTEPGVSA
GQCQCKNGFSGRRCDRCAFGFRDFPACARCECNLAGSTNSDPCSSCTCKVNVMGVRCDQC
KPGFYNLQQQNPLGCTDCFCFGVSDVCQSSDWSVTQVVLSDAVLRPSDPIQAALDVHGND
LGIPSNASSTVAHKHRLVWAAPHRFLGNKLVSFGGRLVSSVVYDVAPDNRDQTLPVLTDV
IMQGNSQTLRLSPPLLLFLSPLAKQPVAMEIYPDRFVDDRTGGPVTRHDLLLVLTDLTRL
SVRVHLNTSTEGPIRLGSVSLYVASSGSGSGVRAVAVETCECPAGYSGTSCESCLPGFYR
VGAVLFGGNCMQCECGGRSAHCDITGVCQGCSHNTTGPHCELCLPGFYGDPTNGDCRLCP
CPLTEPSNSFSPTCVVESSGQVSCDRCQPGYAGSNCERCASGFYGNPQVVGGACVSCECN
GNVNVSEAGYCDAVTGECLRCLDNTAGKHCEACRPGYYGDAVIAKDCKDCGCDVNGSSSS
VCDITTGQCVCRENVTGRTCDRCQSGFFGLQSGRGCLPCGCSQSGSVSESCDQDGRCRCT
EGVAGDKCDRCSHGYYGYHGRNCTACICDHTGGNCDNDSGECTCPPNTEGDTCHRCETGY
WGHDLSTGCKPCSCSAAGSSAPRCHLLSGECPCRDGFSGRSCDRCAPGYYGYPACSACDC
DLAGTNETFCNKTLGVCECRRSGECVCKAGVSGRRCEECVSGWFALSDQNPNGCSDCFCS
GLSKDCEEQGGLTRVPVGLGPVLSLVSLSSQQSVVSGVYQQGGDMLLDTRQLNSSGFAGP
LYWRLPPQTEGNQLMSYGGLLSYIITFYAEDGSGLSNQEPQVLMRGGTLRKHTIFTDVVA
PSNCIVTQHNIRLTEHTWKYFNSVSQRAVTRADFMSVLSNVQDILIKASYGTELQQSRIS
NVTMETAVRAESDSSQEKARLIESCLCPPGYSGLSCQVCSAGFFRQPQSELPAQSLKTMT
VRPCLPCRCNNHSVTCDPETGDCQDCQHHTSGRRCDVCSPGYYGNVSGSISDCSPCACPL
VENSFSSSCVSAAGGFRCTSCLTGYEGRRCERCSPGYHGNPTTPGGLCLPCGCSRWGSLH
QVCDDLTGRCQCKPGVRGRSCDQCEERHALQQEQCVSCDDGCSAVLLDDLDRLNDHFLSV
NLSAVAMAPYRQLVLLENRTKDFKVSVSPNRTGASHLSRLDEDLHHLTFDLSALQQQVTR
LSGSLRDFLTSTNNSWSLSELLLQRVSSLQDEIQVLQKEAGLLNQTNDDELTEDAAGRLE
EAESRLQRLRGINLTAARSAANQELSLSQALLRSLQMDFLSRSPAGEDRLRPLSDSLGVA
MTTLQHARVPLGEAAERNSETEKLLDAAGTLQRHLQAARQNLSSALVSVHKLMEDGQTLQ
EDAVSLSAQLTNRSAQVELLASQLDQLRPALRKHVEVLLIGLKTNSALESVHRAEGHAHQ
LQSHAHSLHSSMMSVVNGSQSLAPSALLDDDVIHRVGSAHKEAGSGLIAASLALHLTGQS
ERTLAAEGGVRLKVSSRVLEESRQVNAMAEEPIPSRNSQKTSAAHQNVFLSSETQASVSM
ATTKLQLARDGVENCSRLLHQPIRELQQLPPGSSRLAQLQAEQARSGLQGALLRLQGLRL
QLQNSSSVVGKTHITVRETNGLMGRAQATANEVQRRLEEAEHRTQQLLERLKPLSMLGET
LSRNLSDIRELIDQARRQAASIKVAVQADRNCVRSYKPPVQSSNVNTMSLVLKTSRPTNL
LFYLGSNTTVDFLAVEMHHGKVSLLWNLGSGTTRLQFPETDIANNRWTKINATRFGAHAA
LSVRQLDSGSAPLPAVTSSSPGSSRVLDIDRNTVIHIGGMGALTQRPAGLHSSSFQGCLG
EASLNERNIGLWSYVSREGRCGGCFSSPQAEETSFYFDGSGFSVVQKSLKATSTSVVLLF
KTLSPGGLLLYLASNNTRDFLSLELVEGHVRLAFDLGSGALVQTSNRKYNTGVWFKVTLQ
RNKRKGYLSVMAAGQSSEKEVLEAESPGTASDLNRYDLDPIYIGGFPSSRAIRRQVVSRA
YVGCIKNVEIARSNFDLLRDAFGVRKGCVLKAVRSVSLLSGGFVQIAPPSFAQEAELLFT
FSSNNQSGVLLAAFSDDRADRQYFLSLHLVSGGVEAELGDVGGATRKVKVLKSGGGSFGD
GSEHSVIMTVNRKSLSLQVDDEHLKSASLMLGGFSRLTPSSLFIGGLPPEKESRLPIRLR
VSSQSFRGCIHHLVVGGALVDLSVAVRYKGAELNSCLLEQSTAGAVLPDDPDVESTPALL
SLTPPTHLSALTAAALTCATEQEASFLPSAAQFGSSSHSHMTFLINPGAFRKSVSVRLSV
RSRALDGLMLLLSDAKQMDFVVLGLRGGRVRLSADLGKGPASVLSTAVNDGHWHSVSAEV
SRRSVSLTVDGSRPATASIKGNHMDVDRMLFLGGLPAGVNGRRIGVSSSLQGCLRSVSLN
GTILDLSKPFSQHDVTSCFTKDQTGSYFNGSGHAELMHDGYKVGADMAVSLEFRTSQSEG
VVLGISSAKVDAVGLEMVDGQVVFNVNNGAGRVALRSTGPVLCDGLWHHLVARKTKHGLT
LRVDGTQYSAANPYPQSTSAETNNPVYLGGVPAGVKQNCLSVRSGFRGCLRNLRLARSHL
NLPLHLSSAHFLSGVTPDSCPAS
NT seq
9252 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttctgctgctgctgatggtggttctgatggagcgggctgcagctcagcacaga
ggcctgttcccggccatcttcaacctggccagtaacgcagagatcagcagcaacgccacc
tgtggggacccagaaccagaggtgtactgcaagctggtggaacacgttccgggtcgtaga
atcaagaacccacactgccccagatgtgacgccaactctatcctcactaaagagcgtcat
ccaatcacgaacgctattgatggaaccaatcagtggtggcagagtccgagcatcaagaac
ggccgtcagtttcactgggtcaccatcaccctggacctgaaccagatatttcaggttgct
tacatcatcatcaaagcagccaattctccacgaccaggtaactggatccttgaacgctct
ctggatggtgtgacctttgacccctggcagtactacgctatcagtgactcggagtgtttg
catcgctacaacatcacaccgagatttggaccgccgacctacaagaccgacaccgaggtc
atctgtacgtcctactactccagactgaacccactggagcacggagagatccacacctct
ctgatcaacggtcgtcctggagcagatgatttgacccctgacctcttgaactttacatcg
gctcgttacatcagagtgaggcttcagagaatcagaacgctgaatgctgatctgatgacg
ctgagcgtccacgacccgcgggacgtcgaccccatcgtgacccggaggtatttttactcc
atcaaggacatctctgtaggcgggatgtgcatctgctacggacatgcccagagctgcccg
ctggacccggttaccaagaaactgaagtgtgtgtgtgagcacaacacctgtggggaaaac
tgtaacgagtgttgccctggttaccatcagctgccatggcaaccaggaaccctctctgaa
ggaaacacctgtgaaaagtgtaactgtcacaacaaagccagcgactgtttctacaaccag
accgtctctgacctcggcctcagcctaaaccgtcatggcgtccgccaggggggcggagtc
tgtatcgactgccagcaaaacacaactgggaccaactgtgagaactgcagggacggatac
tacagaccggccgaggcgtctccgtactctgactttccctgtgtggagtgcagctgcgac
ctgagaggatccagatcatcggtttgccgcagagacaacacagaaccaggtgtgtccgcg
ggtcagtgccagtgtaagaacgggttctcgggtcggcgctgtgaccgctgtgcgttcggg
ttcagggattttcccgcctgcgctcgctgtgagtgcaacctggcaggaagcaccaacagc
gacccgtgcagctcctgcacctgcaaggtgaacgtgatgggggttcgctgtgatcagtgc
aaaccgggcttttacaacctgcagcagcagaaccctctgggctgcaccgactgtttctgc
tttggtgtttctgatgtctgtcagagttctgattggtccgtcacgcaggtggttctttca
gacgctgtcctccgaccttctgaccccatccaagctgctctggatgtccatggaaacgac
cttggcatccccagcaatgcgtcctccaccgtcgcacacaaacacaggctggtatgggcg
gcgccccaccgtttccttggcaacaagctggtgtccttcgggggacggctcgtctcctct
gtggtttacgacgtcgccccggacaaccgggaccagaccctacctgttctcactgatgtc
atcatgcagggtaacagccagactcttcgtctctcgcctcctctgctcctcttcctctcg
ccgctggcaaagcaacccgtcgccatggagatttacccggaccggttcgtagacgaccga
accggaggcccggtaacacgacacgacctgctgctggttctgacagacctgacccgcctg
tctgtccgggtccatctgaacacttccactgaaggaccgatacggctcggttcggtctct
ttgtatgtcgccagttctggctcaggttctggagttcgggcggtcgccgtggagacgtgt
gaatgtccagccggttacagtggaacctcctgtgagtcatgcctcccagggttctaccgg
gtcggggcggttctgttcggagggaattgcatgcagtgtgagtgcggcggccgctccgcc
cactgtgacatcactggagtctgtcagggctgcagccacaacaccaccggcccccactgt
gaactctgccttcctggtttctatggcgacccgaccaacggcgactgccggctctgtccg
tgtcctctaacggagccgtccaacagtttcagtcctacctgtgtggtggagtcgtcgggt
caggtgtcatgtgaccggtgccagcccggctacgcggggtcaaactgtgagaggtgtgcc
agtggtttctacggtaacccgcaggtggtgggcggggcatgtgttagctgtgaatgtaac
ggtaacgttaacgtgagcgaggctggttactgcgacgctgtgaccggggagtgtctgcgt
tgccttgacaacacagcaggaaaacactgcgaggcatgccgtcctggttactatggcgac
gcagtcatcgccaaggactgcaaagactgcggctgtgatgtcaacggctcttcctccagt
gtttgtgacatcacaacaggtcagtgtgtgtgccgagagaatgtgacgggacgcacctgt
gaccgctgccagtcggggttcttcggactgcagagtgggcgtggctgtctgccctgcggc
tgcagccaatcaggatctgtctctgagtcatgtgaccaggatgggcggtgccgttgcacc
gagggcgtagctggagacaagtgtgatcgttgtagtcatggttactacggttaccatggc
agaaactgcacagcatgcatctgtgatcacaccgggggaaactgtgacaacgacagcgga
gagtgcacctgcccccctaacacagagggagacacctgccacaggtgtgagacaggctac
tggggtcacgacctcagcacagggtgcaagccgtgcagctgcagcgcagcaggaagctcc
gccccccggtgccacctgctcagtggagagtgtccctgcagggacggtttctctggcaga
tcatgtgaccgctgtgcacctggttactatggttacccagcatgctcagcgtgcgactgc
gacttggcaggaaccaacgagacgttctgcaataaaacgctcggcgtgtgtgagtgcaga
aggtctggagagtgtgtgtgcaaggctggcgtgtcgggtcggcgctgtgaggagtgtgtt
tctggctggttcgctctgtccgaccagaaccccaacggatgttctgactgtttctgttct
ggactcagcaaagactgtgaggagcagggagggctgacccgagtccctgtcggtctgggt
cctgttctgtcattggtcagcctgtccagtcagcagagtgtagtatctggagtctaccag
cagggcggcgacatgctgctcgacacgcgccagttaaacagtagtgggttcgctggcccc
ctctactggaggcttcccccccagactgaaggcaaccagctgatgtcatacggcggcctg
ctctcttacatcatcactttctacgctgaggacggctcaggactgtccaatcaggagcct
caggtgctcatgaggggcgggaccctgaggaaacacaccatattcactgatgtggttgcc
cctagcaactgcatcgtcactcagcacaacatcaggctgacggagcatacgtggaaatat
ttcaactcggtgtctcagagggcagtgacccgggcggactttatgtccgtcctcagtaat
gtccaggacatcctcataaaggcctcgtatggaactgagctccagcagagcaggatttct
aacgtcaccatggagacggctgtgagggcggagtcagactcctcccaggaaaaggccaga
cttatcgagtcatgtctctgtccaccaggatacagcggcctgtcctgtcaggtctgttcg
gcgggtttcttccgccagcctcagtcagaacttcctgctcagagtctgaagaccatgacg
gtgcgtccatgtcttccatgtcgctgcaacaaccacagtgtgacttgtgacccggagaca
ggagactgtcaggactgccagcatcacaccagcgggcggcgatgtgacgtctgctccccg
ggttactatggaaacgtcagcggctccatcagtgactgctctccgtgtgcctgccccctg
gtggagaacagtttcagttcctcctgcgtttcagccgccggaggtttccgctgcacttcc
tgtctgacaggatatgaaggcagacgctgtgagaggtgctctcctggttaccatggtaac
cccaccacgccaggcgggctctgtctgccgtgcggctgcagcaggtggggctccctccat
caggtgtgtgatgacctcacaggacgctgccagtgcaagcctggggtcagaggtcggtca
tgtgaccagtgtgaggagcgccacgccctgcagcaagaacagtgtgtgtcgtgtgacgat
ggctgcagcgccgttctccttgacgacctggaccgccttaacgaccacttcctgtctgtc
aacctgagcgctgtcgccatggcgccgtaccgccagctggtgctgctggagaaccggacc
aaagacttcaaggtgagcgtttctccaaacagaactggagcgtctcacctgtccagactg
gatgaggacttgcatcacctgacctttgacctcagcgctttgcagcagcaggtgacacgt
ctgtctgggagcctcagggattttctcacctccaccaacaacagctggtccctcagtgag
ctgctgctgcagagagtcagcagcctgcaagacgagattcaggtgctgcagaaggaggcg
gggcttctgaaccagaccaatgacgatgagctgactgaggacgccgccggccgtctggag
gaggcggagtctagactacagcgtctcagagggatcaacctgacagccgccaggtcggca
gccaatcaggagctcagcctctcccaggctctgctccgctcgctgcagatggactttctg
tccaggtcgcctgcaggtgaagacaggctccgcccactcagcgactccctgggcgttgcc
atgacaacgctgcagcatgcgcgagttcctcttggcgaggcggcagagcgaaactcagag
acagagaagctccttgatgctgcaggcactctgcagcgccaccttcaggcggcccggcag
aacctgagttctgcactggtgtcggttcacaagctgatggaggacggtcagacgttgcag
gaggatgccgtcagtctgagcgcccaactgaccaaccgcagcgcgcaggtggagctgctg
gccagccagctggaccagctgcgtccggcgctcaggaaacacgtggaagttttgctgatc
ggcctgaaaaccaacagcgctctggaaagcgttcaccgagccgaaggccacgcccaccag
ctgcagagccacgcccactcgctgcatagctccatgatgtcagtggtcaacgggtcccaa
agcctcgctccctcggcgctcctggatgatgacgtcatccatcgggttggctccgcccac
aaggaagctggatcaggcctgatcgccgcctcgctcgccctccacctgaccggccaatcg
gagcggacgctggcagcggagggcggagtcaggctgaaggtttcctccagggtcctagag
gagagtcggcaggtcaacgccatggctgaagaacccatcccttctagaaacagccagaaa
acatcagcagctcatcaaaatgtcttcctgtcctcagagacgcaggccagtgtttccatg
gcaaccaccaaactgcaactggccagagacggcgtggagaactgcagccgtctgctccat
cagccaatcagagagctgcagcagcttcctccaggttcctccaggctggctcagctccag
gctgaacaggctcgctccgggctgcagggggcgctgctgaggctgcagggactccggctg
cagctgcagaactcttcttctgtggtgggaaagacccacatcacagtgagggagaccaac
ggcttgatgggtcgggcccaggctacagccaatgaggtgcagcgcaggctggaggaggcg
gagcatcgcacacagcagctgttggagagactgaagccgctgagcatgctgggagaaacc
ctgagcaggaatctgtcggacatcagagaactgatcgatcaggccagaagacaggcggcg
tcgataaaggtagcggtccaggcagacagaaactgcgtccgatcctacaaaccgccggtt
cagtccagcaacgtcaacactatgagtctggttctgaagacttcccgtccaaccaacctg
ctgttctacctgggcagcaacaccacagtggacttcctggcagtagagatgcatcatggg
aaggtttccttgctgtggaacctgggttctggaacaacccgactgcagtttcctgaaaca
gacatcgccaacaaccgatggaccaaaatcaacgctacgcggttcggggcgcacgccgct
ctgtccgtccgacagctggactctgggtcggctcctctgccagcagtgacgtcctcttct
ccaggatcatcgcgagttttggacattgacagaaacacggtgattcacatcggaggaatg
ggagctctcactcagcgtcctgcggggctgcactcgtcctccttccagggatgcctgggg
gaagcttcgctgaacgagcggaacatcggcctgtggagctacgtcagtcgggagggccgg
tgtggaggctgcttcagcagtccccaagcagaggagacatctttctactttgatggctca
gggttctctgtggtccagaagtctctgaaagccacatccacctccgttgtcctgctgttt
aagactctgtctccaggtggactgctgctctacctggcctccaacaacacgagggacttc
ctgtctctagaactggttgagggtcatgtccgtctggcgtttgacctgggctcgggggct
ctggtccagacctccaacaggaagtacaacactggagtttggttcaaggtcaccctgcag
aggaacaagcgcaaaggttacctgtccgtcatggcggcaggccaatcatcggagaaggag
gttttggaggctgagtctccaggaaccgcttcggacctgaaccgctatgacctggacccc
atctacatcggagggtttccttcatccagagcgatcaggcgacaggtggtgtcccgggca
tacgttggctgtataaagaatgtggagattgctcgttcgaactttgacctgctgagggac
gcattcggagtccggaagggttgcgttctgaaggcggtgcggagcgtctctctgttgtct
ggaggtttcgtccagatcgctcctccatcattcgctcaggaggcggagcttctctttacc
ttctcctccaacaaccaatcaggagtgttgttggcggccttcagtgacgaccgagcggac
agacagtacttcctgtcccttcacctggtctcaggtggtgtggaggcggagcttggggac
gtgggcggagccactcggaaggttaaagtattgaagtctggaggaggatcattcggtgat
ggaagcgaacactcagttattatgactgtcaacaggaagtctctgtccctccaggtggac
gatgagcacctgaaatcggcatctctgatgcttggaggcttttctcggctgaccccatcc
tctctctttattggtgggctcccgccagagaaggagtcccgtctgccaatcagattgcga
gtttcatcccagagcttcagaggctgcatccatcacctggtggtgggcggagcgcttgtg
gacctatcggttgcagtcaggtacaagggggcggagcttaacagctgcctgttggagcag
agcacggcgggggctgtgctacctgatgacccggacgttgagtcgacacctgcactcctg
tctttaactccgcccacacacctgagcgccctgacagctgcagcgctaacatgtgcgacg
gagcaggaagcatccttcctgccgtcggcggcgcagtttggttcgtccagccacagtcac
atgaccttcctcatcaaccccggcgccttcaggaagagtgtgtcggtgaggttgtcggtt
cgaagccgggctctggacggcctcatgctcctcctgtccgacgccaagcagatggacttt
gtcgtccttggtctgagagggggacgggtcaggctgtctgccgacctggggaaaggccct
gcctccgtcctgtccaccgccgtcaacgatggacactggcactctgtgagcgccgaggtg
agccggaggtctgtgtccctgacggtggacggctcccgtcccgccaccgcctcaatcaaa
gggaaccacatggacgtggacaggatgctgttcctcggagggctacctgccggtgtgaac
ggcaggaggatcggcgtcagcagcagtctccaaggttgtcttcggtctgtcagtctcaac
ggtaccatattggatttgtccaagccgttctcacagcatgatgtcacttcctgcttcacc
aaggatcagacaggaagttatttcaacggcagtggacacgctgagctcatgcatgatggg
tataaggtcggcgctgacatggcggtgtctctggagttccggaccagccaatcagaaggc
gtcgtcctgggcatcagcagcgccaaggtggacgccgtcggcctggagatggtggacgga
caggtggtgttcaatgtgaacaacggggcgggccgcgtggcgctgcgctccacgggcccc
gtgctctgcgacggactctggcaccacctggtggccagaaagacgaagcacggcctgacg
ctgcgcgtggacgggacacagtacagcgccgctaacccctacccacaatccacctctgcc
gagaccaacaaccccgtctatctgggcggggttccagccggcgtgaagcagaactgcctg
agcgtccgctccgggttcagaggttgcctaaggaacctgcggctcgcccgctctcacctg
aacctccctctccacctcagctccgcccacttcctgtcgggtgtcacgccggactcctgc
cctgcctcgtag
DBGET
integrated database retrieval system
