Xiphophorus maculatus (southern platyfish): 102228865
Help
Entry
102228865 CDS
T02923
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xma03041
]
102228865
Spliceosome [BR:
xma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102228865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
HrpB1_HrpK
TPR_11
UTP6_C
TPR_12
HAT
TPR_21
Motif
Other DBs
NCBI-GeneID:
102228865
NCBI-ProteinID:
XP_014330350
Ensembl:
ENSXMAG00000005281
UniProt:
M3ZSV2
LinkDB
All DBs
Position
23:14062389..14069942
Genome browser
AA seq
723 aa
AA seq
DB search
MAAESCEEMSGNGVPEESSAMDVTEALPPPPEASEENGGAAAAPEGPADPDNYSTALATA
SEQEDLPADFERLWKAAHDNPQDFPSWTDLLQYCEHEGHAATYRRALEAFLARYPLCYGY
WKKFVDLERRGGDNNKAEEVCIRGLQAIPLSVDLWIHYINLLLGTLDMNLPDSAVRIRSV
FENGVASCGLDFHSDRLWDLYVEWEKEHGNVKNAAAVLDRALRVPTQLYSTHYDKFKAHL
NNNPPKDVLPSEEYEELRATCRQSQKAKRAEQAQEADEERPPGEEEPATPEGTDSEELMQ
KIRDQVLLRRDKVYQDNEGEVRKRWNYEDAIKRPYFHVRPLDRLQLRAWHTYLDWEIAEL
NKDTKESSQDPNQESTEESEITTQRQEASDDAPAVQGDHRVRILFERCLIACALYEEFWT
RYIQYLEPQGVQETRAVYRRACQVHLPNKPNIHMQWATFEERHGDLNEARRVLEALEKAR
PGLAVVRIRRAALERRAGRLDQSEALLREAVAESKERPTLHAFYSIKLARLLLKVARNPD
GARTVLQEALEISPDNDKLHLNLLDLESSAEPGASAEAVQECVTRALAAPLTPQTKLLLS
QRGLQFTEEYSNSIKSVLSVYEAHQKLLDELGGTKREAENGDEDPEKTSKTDDSSSSSAA
APASSTSHVPITTPPPPVMAADPSAQTGYGAYSSWYQQPQYGGYGGYGYQNAWNYNQSYY
PPS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagagctgtgaagagatgagcggtaacggggtgcccgaagagtcttcagcc
atggatgtcacagaggcactgccacctcctcctgaagcgtcggaggaaaatggcggtgca
gctgcggcccctgagggtcctgcagacccagataactactccacagccctggcaacagcg
agcgaacaggaggatctacctgcagactttgagcgtctgtggaaagccgcacatgacaat
cctcaggacttccccagctggaccgatctgctccagtactgtgagcatgagggtcatgct
gccacgtaccgcagagcgctggaagcctttctggctcggtatcctctctgctacggctac
tggaaaaaatttgtcgacctggaacgtcgaggcggcgacaacaataaagcagaggaggtg
tgtattcgtggtcttcaagcaattcctctgagcgtagatctttggatccactacatcaat
ctgctgctgggaacgttggacatgaacctccccgattcagctgttcggattcgcagtgtt
tttgagaatggcgttgcgtcgtgcggtttggatttccactcggaccgcctgtgggatctc
tatgtggagtgggagaaggagcacggaaacgtgaagaacgcagcggccgtcctggaccga
gcgctcagagttcccactcagctctacagcacccactacgacaagttcaaagcgcatctt
aacaacaacccgcctaaagacgtgctcccctctgaggagtacgaggagctgagggcgacg
tgccggcagagccagaaggcgaagcgggccgaacaggcccaggaggcggacgaggagagg
ccgccaggagaggaggagcccgctacacccgagggtaccgactcggaggagctgatgcag
aagataagagaccaggttctgcttcgtagagacaaagtttaccaggacaacgagggagaa
gtcaggaaaaggtggaactatgaagatgctatcaagcgtccatacttccacgtccggccg
ctggaccgcctccagctccgagcctggcacacctacctggactgggagatcgctgagctg
aacaaagacaccaaagagtcctcacaagatccaaaccaggaatcgacggaggaatctgag
atcacaacgcagcgccaggaggcatcagatgatgctcccgccgtccagggcgaccacaga
gttcgcatcctgtttgagcgctgcctgatcgcctgcgctctgtacgaggagttctggacc
aggtacattcagtacctggagccgcagggcgtgcaggagacccgggccgtctacaggcga
gcctgccaggtccacctccccaacaagcccaacatccacatgcagtgggccacgtttgag
gagcgacacggtgacctcaacgaggcccggcgggttctagaggccctggagaaagcccgg
cctggtctggctgtggttcgcatccgcagggcggccttagagcgccgagcgggccggctg
gaccagtcggaggctctgctgcgagaggcggtggctgaatccaaagagaggccgacgctg
cacgccttctactccatcaagctggcccgtctgctgctcaaagtggccagaaacccagac
ggcgcccgcacggttttacaggaagcgctggagattagtccggataacgacaagctgcac
ttgaacctgttggacctggagtcatctgcggagccgggggcttcggccgaggcggtgcag
gagtgcgtgactcgggccctggcggctccgctcaccccacaaaccaagttacttctgtca
cagagaggcctccagttcacagaggagtacagcaactccattaagagcgtgctgtccgtc
tacgaggcgcatcagaagctgctggacgagctgggaggcacaaagagagaagcagagaac
ggggacgaggatccagagaaaactagcaaaacagacgacagctcttcttcttctgctgct
gcgccggcatccagcacgtcgcatgttcccatcaccacgccgccgcctcctgtgatggcc
gccgacccgagcgcccagaccggatacggagcgtacagcagctggtaccagcaaccgcag
tacggcggctacggcggctacggctaccagaacgcctggaactacaaccagtcctactat
ccacccagttaa
DBGET
integrated database retrieval system
