Xiphophorus maculatus (southern platyfish): 102228877
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Entry
102228877 CDS
T02923
Symbol
npas4
Name
(RefSeq) neuronal PAS domain-containing protein 4
KO
K26457
neuronal PAS domain-containing protein 4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102228877 (npas4)
Transcription factors [BR:
xma03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102228877 (npas4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
Motif
Other DBs
NCBI-GeneID:
102228877
NCBI-ProteinID:
XP_005799546
Ensembl:
ENSXMAG00000013170
UniProt:
M4AFF7
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All DBs
Position
23:6703193..6708724
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AA seq
901 aa
AA seq
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MYRSTKGASKARRDQINAEIRNLKDLLPISDADKARLSYLHIMSLACMYTRKSVFFTQEA
GSAGSDQERAAFLSFHELSELMQAMPGFLMLLTGEGKLLYLSDSVSEHLGHSMVDLVAQG
DSVYDIIDTADHFIMRTNLSASTSLEMDRLFRCRFNTSKSVRRQSAGNKPVLIRARCLAP
PSTASSYWTSNPVWVCFCTPLEPQPTRSGSGPDRDTTSAPPLAETNLFLACFHSQHGRDM
RLQAAQDSMTVYLGYDVTALRSRSWYGLLHPQDLSHASAQHRSLLREGGEGRAEMVVRVQ
AHDLSWVWLYMVLQLQHGDVPISSNNYIISDSEAWSVRQQLSSEQTQLTLVLSAGPSQPE
GLSLQSPETLSSPDQVFTPGSSGLSAQSFDFSTTGCSVGSSDEPGSSIAEPMQLEGDPRS
SISSLEEDSFFQPPPTETLSAASSPTPVTVETVADLDFLTQNILLPPSFQLDPPLPLPLP
TSQAQQTKEFVCTPPYTPQVGGTSFQFNEPLFSFDPTGTTTPPPSATTATSSTSLAPSAS
STAPPTTNPSPAPPTTLSTKLPLALPALSTDLLFPVETCSGALYEKLPPTPDSPGDGDCT
VMTLPEVRGPLYVDVPLGPLQCPPEGLLTPEASPGKQPCLTFFSLEREKERAEISLLAQH
ISSLAEGFYLDPLLSKLSPSSSPPSPFLSPAIEAADPVHMLREFYPVKTWRGLDIPIFLD
DDDSLFEENILETILQDDFAPNLSAPSSPTSPHTPVCWHQPSQFEGAGHICSVQSAQCNS
VARRGASVATKDGEGLAEEAMEMEVEVASSPVSSCSSIPASPPLILTASPSPAAAMPVAS
PTPAVSCTQSLLEELAVLEPMFGAGASIAPGLGQQPELYQLQCHPSPQCFHKDGSGSVPP
F
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctcaaccaaaggggcgtccaaggcgcgacgagaccagatcaacgcggagatc
cggaacctgaaggacctgttgcccatctctgatgcagataaagcgcggctctcgtatctg
cacatcatgtccctggcctgcatgtacaccaggaagtccgtcttcttcacgcaagaagct
ggatctgctggtagcgaccaggagagggctgcgtttctgtcttttcacgagctgtcggag
ctgatgcaggcgatgccgggcttcctgatgctgcttaccggagaagggaagctgctctac
ctgtctgacagcgtctccgagcacctcggacactccatggtggatcttgtggcacaaggt
gacagcgtttatgatataatcgacactgcagatcacttcatcatgaggaccaacctgtct
gcttctacatcacttgagatggaccgtctctttcgctgccgtttcaacacctccaagtcg
gtgcggaggcagagtgccggaaataagccggttctgatccgcgctcgctgcctcgctcca
ccctccaccgccagctcctattggacctccaacccggtgtgggtgtgtttctgcaccccg
ctggagccacagcccactcgctctgggtcagggccagacagggacacgacctctgccccc
ccactggccgagaccaacctgtttctggcgtgtttccactcccagcacggccgagacatg
aggctccaggcggcacaggacagcatgactgtgtatctgggctacgatgtgacagcttta
cgctcccgctcctggtacggcctcctccacccacaggatctgtcacacgcctctgctcag
caccgcagcctgttgagggaaggtggagagggcagagctgagatggtggttcgtgttcag
gctcacgatctgtcctgggtttggctctacatggtgcttcagctgcagcatggagacgtt
cccatcagcagcaacaactacatcatcagtgactctgaagcctggtcggtgcgccagcag
ctcagctccgagcagacccagctgaccctggttctgagcgccggcccgtctcagccggag
ggcctgagcctgcagtctccagagaccctgtccagcccagaccaggtgttcacgcccggt
agcagcggtctgtccgcccagtccttcgacttcagcacgaccggctgcagcgttggctcc
tcggacgagccgggcagctccatcgccgagcccatgcagctggagggagaccctcgctcc
agcatctcctctctggaggaggacagcttcttccagccgccgccgacagaaaccctctcc
gccgcgtcttcgccgactcccgtcacggtggagacagtagcagatttggactttttaacc
cagaacattctcctgcccccgtccttccagctcgacccgccgctgccgctgccgctgccc
acctctcaggctcagcagaccaaagagtttgtgtgtaccccgccgtacacgccgcaggtc
ggaggaaccagcttccagttcaatgagccgctcttcagcttcgaccccactggcaccaca
acgcctcctccctctgctacgaccgccacctcctccacctcgctggcaccctccgcctct
tccacagccccgcccactacgaaccccagccccgctccgcccaccaccctctccaccaag
ctgcccctggctttgcctgccctttccaccgacctgctgttccccgttgagacgtgcagc
ggcgccctgtacgagaagctgccccccacgcccgacagtccaggagacggagattgcaca
gtgatgactctgccagaggtccgcgggccgctttacgtcgacgtgccgctcgggcccctc
cagtgtccccctgaaggcctgctgacccctgaggcgtctcccggcaaacagccctgcctc
accttcttctccttggagcgggagaaggaacgggcggagatttccctcctggctcaacac
atcagctccctggctgagggtttctacctggatcctcttttgtccaaactgtccccctcc
tcctcgcctccatcgcccttcctgtccccggctatcgaagcggcggatccagtccacatg
ctgagggagttttatcccgtaaaaacatggagaggtctggacatccccatcttcctcgac
gacgatgactctctgtttgaagagaacatcctagaaacgatcctgcaagacgacttcgct
cccaacctctctgccccctccagtcccacctccccacacaccccagtgtgttggcaccaa
ccctcccagtttgagggagcgggccacatctgtagcgtccaatcggcgcaatgtaactcc
gtggccagacgtggggcgagcgtggcgacgaaggacggggaagggctggcggaggaagca
atggagatggaggtggaggtggcgtcgtcgcccgtgtcgtcttgctcctccatccctgct
tcccctcccctcatcctcaccgcctccccgagccccgccgccgccatgcccgtcgcctcg
cccacgcccgccgtgtcttgcactcagtccctcctggaggaactggccgtcctggaaccc
atgtttggggcaggtgcctcgatcgcccctggcttagggcaacaacctgagttgtatcaa
ctccaatgtcatccatcgccacagtgcttccacaaagatgggagtggaagtgttcctccg
ttctaa
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