Xiphophorus maculatus (southern platyfish): 102228893
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Entry
102228893 CDS
T02923
Name
(RefSeq) FERM and PDZ domain-containing protein 1-like
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
102228893
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
Other domain-containing proteins
FERM domain-containing proteins
102228893
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
FERM_C_FAK1
FERM_f0
PDZ_2
RA_3
NUSAP
SNX17-27-31_F1_FERM
Motif
Other DBs
NCBI-GeneID:
102228893
NCBI-ProteinID:
XP_023188825
UniProt:
A0A3B5PNY6
LinkDB
All DBs
Position
5:17501073..17539233
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AA seq
2064 aa
AA seq
DB search
MESQDRSRSPSRRTSRVEQVVGRWLRRSRDLGSRSHSLSRDRVAVDGKTGESGSSDQRNY
PFRFNVQIQKDPDLNSHGLTLSSQIPILVQEVTTGGPADGRLVPGDQLVKINNVAVDDLT
PEQAAEIIRECRDTLTMTVLRIMHGPKSSFITPEKRAKLRSNPVKVHFAEEVEVNGQSQG
NSLLFLPNVLKVYLENGQTKAFKFETSTTVKDIVMTLKEKLSLNRIEHFSLVLEQQHNSS
KLLLLHEEERIHQVVQKKEVHNYRCLFRVCFMPKDFKTLLQEDPTAFEYLYLQGVNDVLQ
ERYAIEMRCNTALRLAALHIQERLVSCGLSPKANLKMITKTWGIENFVSSTLLRNMREKD
LRKAIGFHMKKTQSQHDPKQKSLSVDQARINYLEELSDLKSFGGKSFGATLMLQDRESMV
SLLVGARYGVSQVVNHKLSIMTTLTEFNSITRVELLPESDKVSLVKIYLQDIKPITLLLE
AGAAKDISCLIAGYCRVFIDPNLNVFPWIDDKKHRVSAEEGYVSRCASDSEDSSDLDMEP
LYSLMSQDDKPRTRVRSLSDSEGRKRKDRDRMRSKDCKEKGDAPVENKKPKQEKYLDTPR
ASASLGNGKEGKNENTLNRKRPGAKIQIQITGNDSGGHIGPVSPGTGEVEQPSVSEASDS
CHTDSRVLTSPSSDSLDALEEDDLISCTSSSVQTQALSQAHVCVHSPFQLHLHSDGHVQP
HLLAPPPPHSHPLIHLTVVSCAGESGERGDSRRSGDGADPKLLSSPSLSPKGQKRSGELC
SADSSLCFAELSRLADLLPSPPEASEDDDVEDDELRRKGKLQSNISVTLRKADEGGSVGE
HPLSTSPSSPSSHKDFVFNFDQSDARCYYNLCSNITPDSARSLPGPQDPIIHKDEAKAGG
SELIPILQPPPGFGDSSSDEEFFDARDRFTSPEDPTSGAVPRGSQTEMKLDTVSILSLSD
IRVSVTDTEMDKREDQEERESNDSTFLLRKKSRKRRSFMETDYTSRVTYPETDIESESNL
NSYRFLKNISTGPNDNPTFTLDPEPSGQTQNPSPTTSSLTHSEGEPAQLESKPILSKLCS
HDPGFLSASEKNRNLSSPSRTRKQEMEMEPDAMESKSVTDLVKVVPPTITVVRCRVDPDG
KESADRRGDGKEEGEDQEEIGEKTEEAEKENPVGLTGNGPLTSHTFLPDTVEEHGKEEKK
ETVFDLSSSLKRPLVGAEIPQGAIIMPNSFTEVNERLVTAHINKHVDKNFLSLISPPPPP
PSPLLPQTPPALKPETELLIKEAEISKNIPTSINPTAVAPKEQSNNHCGSAKLLKQALIS
VNDEELIHESTESSNSDNVFDDEDDADASNSLSYTSSKKPKDRTVSANSCLGNYLTQGTT
DETHIRAQLLLNLELQNRDHSVNADHILAIKSIRAKLGAATSIMSSLNSGTALKNTVTPK
PKSDSTLMSSGPAESLGSPGIVMAKAATLNDLSKELPPPSRFILQTCSPSIMGRLSASTL
RGKIQNLPLYLSRSQENLTQAGVGSSAPSPAGEASSDNACTTDNVPNITQTLDLETCIAP
DSVESDDSDATLTGSELDGEFFVETTAAKRSPLASEKKEVSCQLPVQTEPKQHHQTLCSR
PNDNTPGPITEPPASITSLFQRNTSGLNTNIPGPVTDAPELNIKVNSLQEDIPGYKGSNQ
SPIVVTTQNLNGPQLAFHGQSQKARTSSDRPLMGLCSPLEQTSDPSKVSSAGCRVFTICE
DLSQTSTPADLVATTPLKSEFGCSSILASGCESVAEGIQVPLDACGCPTSYTDCFSGEDS
FDDELTVYEFSCRSQNSGISQTSRAGLHLITSPPVPSFISASSTLSPSFPQTILFSSSTS
ELSPLLSPHSDTSESYLSETHKDTLTHLGQQHYPEPPKGFQVLRRDVDKLLSILEGSGGS
DRSVAGLGGRHSRDTCPAHFTENKRVLQLEARRLMSSCQKVAGTGQSPEEMLQFLADSFR
TLVELATVCLWFSGCERCDRRNTEAVAGLADVARSFRDFCLAAERASSKRSCQDLSTKLL
AKQCTALTASVFCLTQLFRTLTAL
NT seq
6195 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcaggacaggagtcgctccccgtcccgcagaaccagccgagtggaacaggtg
gtgggacgatggctgagacggtccagagatttgggcagcaggtctcactctctgagcaga
gatcgtgttgcagtggatgggaaaacaggagagtccggtagctccgatcagagaaattac
ccgttccgattcaatgttcagatccaaaaggacccggacctcaactcccatggcctcacg
ctttccagccagatccccatcctggtgcaggaagtcaccacaggtggtcctgcagatggc
cggctcgtccctggcgaccagcttgtgaaaatcaataacgtggctgtcgatgatctgacc
ccggagcaagctgctgaaataatcagggagtgtcgagacacgctgaccatgactgtcctc
agaatcatgcatggcccgaagtcgtcattcatcacacctgaaaagagggccaagctccgg
tccaaccctgtcaaagtccactttgcagaggaggtggaggtcaatggacagtctcagggg
aactcgctactcttcctgcccaacgttttgaaggtgtatctggagaacgggcagactaag
gctttcaagtttgagaccagcacaactgtcaaggatattgtgatgacactaaaggaaaaa
ctttcactgaaccgaattgaacacttttccttggtgctcgaacagcagcacaacagcagc
aagctgctgctgctacatgaagaggagaggatacatcaggtggtccagaagaaggaagtc
cataactacaggtgtttgttccgtgtttgtttcatgcccaaagatttcaagacgctgctg
caggaggatcccactgcctttgagtatctttaccttcagggggtgaacgatgtgctccag
gaacgctacgccattgaaatgcggtgtaataccgccttaagacttgctgcgctgcacatt
caggagaggctggtgagctgcggactgtcccccaaagccaacctgaagatgatcacgaag
acttggggcatagaaaattttgtgtcgtccaccttactgaggaacatgcgagaaaaagat
ctgaggaaggcaatcggctttcacatgaagaaaacccagtcccagcatgatcccaagcaa
aagagcctgtcagtagatcaagcacggatcaactatctagaggagctgagtgatctgaag
tccttcgggggaaagtcctttggtgccaccttgatgcttcaagacagggagtcaatggtg
agcctgctggttggcgcgcgctatggggtgagtcaggtggtcaaccacaagctgagtatc
atgacgacccttacagagttcaacagcatcactcgcgtcgagctgctaccggaatcagac
aaagtcagcctcgtcaagatatacctgcaggacatcaagcccatcacattactattggag
gctggtgcagcaaaagatatatcttgccttatagcaggctactgccgtgtgtttattgac
cctaacctcaacgttttcccctggatagatgacaagaaacacagagtttctgctgaagaa
ggttatgtgtcaagatgtgcaagtgactcagaggactcttcagacttggatatggagccg
ttgtacagcttgatgtctcaagatgacaaaccccgcactcgtgttagatccctgtcagac
tctgaaggacgaaagaggaaggacagggaccggatgagaagcaaagactgcaaagagaag
ggagacgcacctgtggagaataaaaaaccaaaacaagaaaaatatcttgatactccaaga
gcgtctgcttcattaggaaacggtaaagagggaaagaatgagaacacattgaacagaaag
aggcctggtgcaaaaatacagattcaaataacgggcaatgattcagggggtcatataggg
ccagtaagccctggaactggagaggtagagcagccgtctgtatcagaagcatcagactca
tgtcacactgactctcgtgtcctcaccagtccctccagtgactctcttgatgctctggag
gaagacgatttaatttcgtgcacctcctcttctgtccagactcaagctctctcacaagct
catgtctgcgttcactccccttttcagcttcacctccactctgacggacatgttcagcct
cacctcctcgctcctccaccacctcactctcatcccctcattcacctcacagttgttagc
tgtgccggagaatcaggagaaagaggagacagcaggagatctggtgatggagctgatccc
aaacttctgtcctccccatccctcagccccaaaggtcaaaaacgttcaggtgaactctgc
tcagcagacagctcgctgtgtttcgctgagctctcccgtctcgcagatctcctgccgagt
cctcctgaggctagcgaggatgatgatgtcgaagatgacgagctgaggcggaagggaaag
ttacagagcaatataagtgtgacactgagaaaggcagatgaaggtggaagtgttggagag
catcctctctccacttctccgtcatccccgtcttcccacaaagactttgtttttaacttt
gaccaaagcgatgctcgctgctactacaacctatgctccaacatcacccctgacagcgct
cgcagccttccaggccctcaggatcctatcatccataaggatgaagcgaaggctggtgga
tctgagctaattcccatcctccagccgccccctggattcggggacagcagctcagatgag
gagttttttgatgcaagagatcgcttcacctcacctgaagatcccacgtcaggtgccgtc
ccaagaggcagtcaaacagaaatgaagctggacaccgtgagcattctcagccttagtgat
atcagagtctctgtaacggacacagaaatggacaaacgggaagaccaagaggaaagagaa
agcaatgactcaacatttctcctccggaagaagtcgagaaagcgacgctctttcatggaa
actgattacacctcgagagttacgtatccagaaactgatatcgaatcggagtccaattta
aactcttacaggtttcttaaaaacatttcgacaggcccaaatgataatccaacatttact
ttagatccagaaccctcggggcaaacccaaaatcccagccctaccacctcctcactcact
cattctgaaggagagccagctcagctcgagtccaaacccatcctgtcaaagctttgctca
catgacccaggatttctgtctgcttctgaaaagaataggaatctaagctccccctccaga
accaggaagcaggaaatggagatggaaccagatgcaatggaatcaaaatcagtcacagat
ttggtaaaggtggttcctcctactatcaccgtcgtccgctgccgggttgatccagatgga
aaagagagcgcagatcggagaggtgacggaaaggaggaaggggaagatcaggaagagatt
ggtgagaaaacagaagaagcagagaaggaaaatccagtaggtttgacaggaaatggacca
cttactagtcatacatttttgcccgatacagttgaggagcacgggaaagaagaaaagaaa
gagactgtgtttgacttatcatccagtttaaagagaccccttgtgggtgctgaaatacca
cagggtgcaatcataatgcctaatagttttacagaagtgaatgaaaggttggtcactgca
catataaacaaacatgttgataagaatttcctttcactgatttcaccacctcctcctcca
ccatcaccgcttctccctcaaacacctcctgcacttaaaccagaaacagagcttttgata
aaagaggcagaaatctccaaaaacataccaacatcaattaatcctactgctgtagctccc
aaagaacagagtaataaccactgtggctctgctaaattattaaaacaggctttaataagt
gttaatgatgaagaactcattcatgaatctacagaaagctctaattcagacaacgttttt
gacgatgaagatgatgcagatgctagtaattccctaagttacacttcgagtaagaaaccg
aaagacaggactgtaagtgcaaacagttgccttggtaattatttaacccagggaactaca
gatgaaacacacatcagagctcagcttcttttaaaccttgaactccaaaatagggaccat
tctgtcaatgctgatcacattctcgctataaagtcaataagggcaaaactgggagctgca
acaagcatcatgtcctctcttaactcaggaactgcactgaaaaacacagttacaccaaaa
ccaaaaagtgactccaccttgatgagtagtggacctgcagagagtttaggaagtcctggc
attgtgatggcaaaagctgccacactgaatgatctctccaaagagcttccgcccccatct
cgttttatcttacagacgtgttcaccgagcatcatgggccgcttatctgcctcaacgcta
agggggaagattcaaaacttgcccctttatctatcacgctcccaagaaaatctaactcaa
gcaggggttgggagttctgcgccgagtccagctggggaagctagtagtgacaatgcatgt
accaccgacaacgttcccaacatcacacaaacccttgacttagagacatgcatagcacct
gactcagttgaatcagatgattccgatgcaacgctgactggatctgaattggatggggag
ttttttgtagaaacaacagcagcaaagagatctcctttggcgtctgagaaaaaagaagtt
agttgtcagctgcctgtacagactgagcccaaacagcatcatcaaactctttgttccaga
cctaatgacaacacaccaggacccataacagagcctcctgcatctataacaagcctattt
caaagaaatacttctgggcttaacaccaacattcctggacctgtaacagatgccccagaa
ctaaacataaaagtcaacagtctacaggaagacatcccaggttacaaagggagcaatcag
tctccaatagtggtgaccacccagaatctgaatggaccacaacttgcttttcatggtcaa
tctcaaaaagcaaggacaagcagtgacagacctttgatgggtctttgtagtcccttggag
cagacttcagacccgtcaaaagtatcttctgccggttgcagagtgttcaccatctgtgag
gatttgtctcagacaagtactccagctgaccttgttgccactacacccctgaagtctgag
tttggttgcagttctatacttgcatctgggtgtgagtcagtagcagaggggatccaggtg
cccctggatgcctgtggctgtccaacatcatatacagactgcttcagtggagaagacagc
tttgatgatgagctcacagtctatgagttctcctgccgctctcagaacagtggcatttct
caaacttccagagcaggtcttcatctgattacatctcctcctgttccctcctttatctct
gcctcctccaccctctccccatcatttcctcaaaccatccttttctcctcctccacctct
gagctcagccctcttctctcaccccactcagacacctcggaatcctacttgtctgaaacc
cacaaggacactctcactcatctgggtcagcagcactacccagaacctcccaaaggcttc
caagttcttcgcagagatgttgataagcttctatcaattttggaaggtagtggtggctct
gatcgttctgtggcagggcttggaggtcgtcattcaagggacacatgcccggcacacttc
acagagaacaaacgggttctccagttagaagcacggcggctcatgtctagttgccagaag
gtagcagggactggccagagcccagaggaaatgctccagtttttagctgacagttttcga
accttggtggagctggccaccgtctgcctctggttctctggttgcgaaaggtgcgatcga
agaaacacagaggcagtcgcaggcctggcagatgttgcccgctcattcagggacttctgc
ttggcggcggagcgagccagcagcaaacgtagttgtcaagacctgagcaccaagctgcta
gccaaacagtgcacagcacttaccgcctccgtcttctgcctcacccagctgtttcgtacc
ctcactgcactgtga
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integrated database retrieval system
