Xiphophorus maculatus (southern platyfish): 102228932
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Entry
102228932 CDS
T02923
Name
(RefSeq) low molecular weight neuronal intermediate filament-like
KO
K07606
vimentin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102228932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102228932
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102228932
04147 Exosome [BR:
xma04147
]
102228932
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
102228932
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
102228932
Exosome [BR:
xma04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102228932
Exosomal proteins of other cancer cells
102228932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF724
HBM
THSD1_D3
ZapG-like
DUF4897
Motif
Other DBs
NCBI-GeneID:
102228932
NCBI-ProteinID:
XP_023184040
UniProt:
A0A3B5QJT5
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All DBs
Position
23:complement(8883625..8909786)
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AA seq
381 aa
AA seq
DB search
MAMLRVSSYRRLFDDDRRSPNGGPRLHQASARCASAGKCDCDKVDFVTATALNKAGLDRF
IQERTTMAALNDRLVKLIELAHCLEEENGSLECQIADLEENLNGQPASTEITSTAAKPKF
SLEAVVEKLCRQKDEIICDTEELKEELECLQKEFEKAAYQRIVVQQGQQDAAEAVDAVTA
ECLALRDQVAVYEEQLANMETQHKMEVESQLQPDERALAAAAVRFGSPDITPALEVKEYH
RQLAESLQLEFGALSSGKSDGKKLEARGTGGSMVKDPTEITDVDEMKTLISELQKELDDL
EKSNEELLDEVEVKGAAYMDEVDELEFTITEMKQQEVDFKSQMKEQCEEYRELLSEKMAR
DMEIAAYRSLVEEEEVRLCSL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctcagagtgtcttcataccgccggctgtttgacgacgacaggcggagtcct
aacggagggccgaggctgcaccaggcctccgccaggtgtgcctctgctggcaaatgtgac
tgtgataaagtagactttgttacagccacagctctgaataaagcgggtctagaccggttc
atccaggagcggaccaccatggctgccctcaacgaccggctggtcaaactcattgagttg
gcccactgtttggaagaggagaacggctctcttgaatgtcagattgctgatctggaggaa
aatctgaacggtcaacccgcctccaccgaaatcacctccactgcagcgaaaccgaagttc
agcttggaggcagtggtggaaaaactgtgcaggcagaaggatgagattatttgtgacaca
gaggagctgaaggaagagcttgaatgtctccagaaggagtttgaaaaagctgcctatcag
aggatcgtcgtccagcagggacaacaagatgcggctgaggcggtcgatgctgtgactgca
gagtgtttggctctgagggaccaagtggccgtctatgaggaacagctggcaaacatggag
acccaacacaagatggaggtggagagccagctgcagccagatgaaagggcgctggctgca
gctgcggtcaggtttggcagccctgacatcaccccagccttggaagtgaaggagtaccac
cgccagctggccgagagcctccagctggagtttggggcgctctcctctggcaaaagcgat
ggaaagaaactggaagcgagaggaactggtgggtcaatggtcaaagacccaacagagata
actgatgtggacgagatgaagactctgatttcagagctgcagaaggaactcgatgacctt
gagaagagtaatgaggagctgttggatgaagttgaggtgaaaggggctgcgtacatggat
gaggttgatgagttggagtttactataacagaaatgaagcagcaggaggttgacttcaaa
tcccagatgaaagagcagtgtgaggagtacagggagctgctcagtgagaagatggcaaga
gacatggagattgcagcctacaggagtctggtggaggaagaggaggtgagactctgcagc
ctgtga
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