Xiphophorus maculatus (southern platyfish): 102228932
Help
Entry
102228932 CDS
T02923
Name
(RefSeq) low molecular weight neuronal intermediate filament-like
KO
K07606
vimentin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04519
Cadherin signaling
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
102228932
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102228932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102228932
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102228932
04147 Exosome [BR:
xma04147
]
102228932
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
102228932
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
102228932
Exosome [BR:
xma04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102228932
Exosomal proteins of other cancer cells
102228932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
KIF21A_4th
DUF724
CCDC89
HBM
THSD1_D3
ZapG-like
HH_AprE
bZIP_2
DUF4897
Motif
Other DBs
NCBI-GeneID:
102228932
NCBI-ProteinID:
XP_023184040
UniProt:
A0A3B5QJT5
LinkDB
All DBs
Position
23:complement(8883625..8909786)
Genome browser
AA seq
381 aa
AA seq
DB search
MAMLRVSSYRRLFDDDRRSPNGGPRLHQASARCASAGKCDCDKVDFVTATALNKAGLDRF
IQERTTMAALNDRLVKLIELAHCLEEENGSLECQIADLEENLNGQPASTEITSTAAKPKF
SLEAVVEKLCRQKDEIICDTEELKEELECLQKEFEKAAYQRIVVQQGQQDAAEAVDAVTA
ECLALRDQVAVYEEQLANMETQHKMEVESQLQPDERALAAAAVRFGSPDITPALEVKEYH
RQLAESLQLEFGALSSGKSDGKKLEARGTGGSMVKDPTEITDVDEMKTLISELQKELDDL
EKSNEELLDEVEVKGAAYMDEVDELEFTITEMKQQEVDFKSQMKEQCEEYRELLSEKMAR
DMEIAAYRSLVEEEEVRLCSL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctcagagtgtcttcataccgccggctgtttgacgacgacaggcggagtcct
aacggagggccgaggctgcaccaggcctccgccaggtgtgcctctgctggcaaatgtgac
tgtgataaagtagactttgttacagccacagctctgaataaagcgggtctagaccggttc
atccaggagcggaccaccatggctgccctcaacgaccggctggtcaaactcattgagttg
gcccactgtttggaagaggagaacggctctcttgaatgtcagattgctgatctggaggaa
aatctgaacggtcaacccgcctccaccgaaatcacctccactgcagcgaaaccgaagttc
agcttggaggcagtggtggaaaaactgtgcaggcagaaggatgagattatttgtgacaca
gaggagctgaaggaagagcttgaatgtctccagaaggagtttgaaaaagctgcctatcag
aggatcgtcgtccagcagggacaacaagatgcggctgaggcggtcgatgctgtgactgca
gagtgtttggctctgagggaccaagtggccgtctatgaggaacagctggcaaacatggag
acccaacacaagatggaggtggagagccagctgcagccagatgaaagggcgctggctgca
gctgcggtcaggtttggcagccctgacatcaccccagccttggaagtgaaggagtaccac
cgccagctggccgagagcctccagctggagtttggggcgctctcctctggcaaaagcgat
ggaaagaaactggaagcgagaggaactggtgggtcaatggtcaaagacccaacagagata
actgatgtggacgagatgaagactctgatttcagagctgcagaaggaactcgatgacctt
gagaagagtaatgaggagctgttggatgaagttgaggtgaaaggggctgcgtacatggat
gaggttgatgagttggagtttactataacagaaatgaagcagcaggaggttgacttcaaa
tcccagatgaaagagcagtgtgaggagtacagggagctgctcagtgagaagatggcaaga
gacatggagattgcagcctacaggagtctggtggaggaagaggaggtgagactctgcagc
ctgtga
DBGET
integrated database retrieval system
