Xiphophorus maculatus (southern platyfish): 102229111
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Entry
102229111 CDS
T02923
Name
(RefSeq) opsin-5-like isoform X2
KO
K08385
G0-opsin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xma04030
]
102229111
G protein-coupled receptors [BR:
xma04030
]
Rhodopsin family
Vision
Opsin
102229111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
102229111
NCBI-ProteinID:
XP_005810743
Ensembl:
ENSXMAG00000018048
LinkDB
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Position
1:complement(24965976..24982990)
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AA seq
391 aa
AA seq
DB search
MGNASDAASLFASSISKEQDILMGSVYSLFCILSLIGNCLLLLVAFHKRSTLKPAEFFII
NLSISDLGMTLSLFPLAIPSAFSHRWLFGEITCQLYAMCGVLFGLCSLTNLTALSLVCCL
KVCFPTYGNKFSPSHSRLLVAGVWCYSSVFAVGPLAQWGHYSAEPYGTACCIDWHAPNQE
LSALTYIVCLFVFCYALPCTIIFLSYSFILLTVRGSRQAVQQHVSPQTKTTNAHALIVKL
SIAVCIGFLGAWTPYAAVAMWAAFGDATTVPPVAFALAAVLAKSSTIYNPMVYLLCKPNF
RECLCRDTSTLRQMMHRGSPQPQERFSFTPQRNKDTSASTRFSNGQQDSYGACLNCTENA
ALQNTACVLTGSSYTEVTVSQLSAKPGTDFI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgcttcagatgcagcctctttgtttgcctcgagcatctcgaaggagcaagac
atcctcatgggttccgtctacagcttgttttgtatcctgtccctcataggcaactgcctt
ctgctgcttgttgcttttcacaagagatcaactttgaaaccagcagagttcttcatcatc
aacctctccatcagcgaccttgggatgacgctgtctctgtttccactggcaataccgtcg
gccttttcgcacaggtggctttttggagaaattacctgccagctttatgccatgtgtgga
gtgttgtttggtctctgcagcctgacaaacctcactgccctctccttggtgtgttgcctt
aaagtctgctttcctacttatgggaacaagttctcgccctcacactcccgcctcctggtg
gccggagtgtggtgctactcatctgtgtttgccgtggggcccctggcacagtgggggcat
tacagtgctgaaccttacggcacggcctgctgcattgactggcacgcacccaaccaggag
ctttcagctttgacatacatagtctgcctttttgtcttttgctatgcactgccctgcacc
atcatcttcctctcctatagtttcattctgctgaccgtgcggggatcgcgtcaggcggtt
cagcagcatgtgtcaccccagaccaagaccaccaatgcacacgctctcatagtgaagctg
tccatagcagtgtgcattggttttctgggagcctggaccccttacgctgccgtggcaatg
tgggctgctttcggagacgccacaaccgtccctcctgttgcgttcgccctggccgcagtg
ttggccaagtcttccaccatctacaacccaatggtctacctgctgtgcaagcccaatttc
cgcgagtgtttatgtagagacacgtctacactgcgacagatgatgcacaggggtagtcca
cagccgcaggagcgattcagcttcactccacagcgcaacaaggacacgagtgcctccaca
aggttctcaaatggtcagcaggatagctacggggcatgtctgaactgcaccgagaacgca
gcgctgcagaataccgcctgcgtcctgacgggatcctcctacaccgaggtgacagttagt
cagctctcagccaaaccaggaacagatttcatctaa
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