Xiphophorus maculatus (southern platyfish): 102229326
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Entry
102229326 CDS
T02923
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X2
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04137
Mitophagy - animal
xma04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102229326 (usp8)
04137 Mitophagy - animal
102229326 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xma01002
]
102229326 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102229326 (usp8)
04121 Ubiquitin system [BR:
xma04121
]
102229326 (usp8)
Enzymes [BR:
xma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102229326 (usp8)
Peptidases and inhibitors [BR:
xma01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102229326 (usp8)
Membrane trafficking [BR:
xma04131
]
Endosome - Lysosome transport
Others
Others
102229326 (usp8)
Ubiquitin system [BR:
xma04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102229326 (usp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
102229326
NCBI-ProteinID:
XP_014324498
Ensembl:
ENSXMAG00000002148
UniProt:
M3ZIV8
LinkDB
All DBs
Position
4:24089212..24104225
Genome browser
AA seq
1079 aa
AA seq
DB search
MPAVSTGAKELYLSTSLGDLNKKAEIKPDKTSTRSYVQSACKLFKAAEECRLDRDEEKAY
VLYMKYLTVYDIIKKRPEFKQQPDYYMTMLGANSFKKAIEEAEKLSESLKLRYEEVEVRR
KLEEKERLEEKKKREEVTEKDGRNSPKASTINKKDSKKAKGEQNELKSVITKAAQPAGGI
TAEKLFNMMKDQTISVLVMDARSHRDYEESHMQVPAQTCISVPEEAVSPGITVTLIEAKL
PDASKDHWRRRGVVDYVVLLDWFSSASDLKLGTTLMSVKDAIYKWDSLTIMRSEPLVLEG
GYENWLLFYPMYTTNAKVRPPRQTITNSLPQLNFSYPSLEEPKPPTPTPPEREISPEPQE
PAAPALVNGVSPAEPPASKTSVVADRLPDTVDLPITVPTNSGLDLSKKDPAVSQSPTTAR
VFPQYDRAKKPSVPVSDQTKSGQNRSAIDSTQNGPIIPDRSAKPPLSSGGSLSKDEQQQI
HSEAVAVMEKAKQEQEKRNQERRLEEERREKEQKEREESEKRKKEEEEKRHQEKKRLERQ
TAEEEEDKEKKVWDDRERRGKEQNPDTPSKSMSLDSPAPNHIVSEIKREPLTRARSEEMG
RSVPGLPDGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVTVPQTPPSTPPTAKPRSQKPAE
PDTSHDREREQSKLKRSYSSPDISQEVSEEAQKKTTAPTAAAVIPTINRETKPPSVKVYS
KVESVRPSAAKLRNLNPSFGGLGASLTGLRNLGNTCYMNSILQCLCNTPRMADYFNNNLY
LEDINRSNILGHKGEVAEEFGVIMKALWAGLYKCISPRDFKSTIGKINDQFAGYDQQDSQ
ELLLFLMDGLHEDLNKADNRKRYKEEENDHLDDQNAANVAWNKHKLLNESIIVALFQGQF
KSTVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFCRHCKA
HRDSTKKLEIWKVPPIVLVHLKRFSYEGRWRQKLQTSVDFPLDSLDLAQYVIGPKQNLRR
YNLYAVSNHYGGLDGGHYTAYCKNSLRQRWYKFDDHEVTEISSSSVKSSAAYILFYSTL
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtctccacaggggccaaggagttgtatttatccacatctctaggcgacctc
aacaaaaaagctgaaattaagccagacaaaacgagcaccagaagctatgttcagagtgcc
tgcaaactgttcaaggcggcagaggagtgtcgtcttgacagggatgaggagaaagcttat
gtgctgtacatgaagtacttgacggtttatgacatcataaagaaaaggccagaattcaag
cagcaaccggattattacatgactatgcttggagcaaatagcttcaagaaagccattgaa
gaagccgagaagctgtctgaaagccttaaactcaggtatgaggaagttgaggtgcggaga
aagcttgaggagaaggagcgattagaggagaagaagaaaagggaggaggtaacggagaaa
gatggtcgaaattctccaaaagcctcaacaataaacaagaaggacagcaaaaaggcgaaa
ggagagcagaatgaactgaaaagtgtcatcactaaagctgcacaaccagcaggtggcatc
acagctgagaaactttttaacatgatgaaagatcagaccatatcagtactggtgatggat
gctcgcagccacagggactacgaggagtctcacatgcaggtcccggctcagacctgcatc
agtgtgccggaggaggccgtcagcccaggaatcactgtgactctgattgaggcgaagttg
cctgacgcatctaaagatcactggagaaggcgaggagttgttgactatgtggttctgctc
gactggtttagttctgcatctgaccttaaattaggcaccactttgatgagtgtaaaagac
gccatttataagtgggacagcctaaccattatgcgtagtgagccactggtgctggaggga
ggctatgagaactggctgctgttttatccaatgtatacgaccaacgctaaagtccgaccg
ccgaggcaaacgatcaccaacagcctaccacagctgaactttagctacccgtctttggag
gaaccgaagcctccgactccaactccacctgagcgagagatttcacctgaacctcaggaa
ccagcagctcctgctctggtgaacggcgtctcacccgctgagccgccagcatccaaaacc
tccgtggttgctgacaggttgccagataccgttgacctcccgattacagtacctactaat
tctggtttggacctgagtaagaaggatcctgcagttagccagtcgcctacaactgccaga
gttttcccccagtatgacagagccaagaaaccgtctgtcccggtgtccgatcaaaccaag
agcggccagaaccggtctgcgatagattcaacccagaacggccccatcatccctgaccgc
tcagctaaacctccactcagctccggcggttctctgtccaaagacgagcaacaacagata
cactccgaggcggtggccgtgatggagaaggccaaacaggaacaggaaaaacgcaaccag
gagcgccgcttggaagaggagcggcgggagaaggaacagaaggagagggaggaaagtgaa
aagaggaagaaggaggaagaggagaaaagacatcaggagaagaagagactcgaaaggcag
acggcagaggaagaggaagacaaagagaagaaagtatgggacgacagagagcggaggggg
aaagaacaaaacccagacacgccttcgaagagcatgtctctggattctcctgctcccaac
catattgtgagtgaaatcaagagggagcctctgactagagcaaggagtgaggagatgggt
aggagtgtgccaggcctccctgatggttggatgaagtttttggacacagtgactgggacc
tacagatactaccactcccctacaaaccgcgtccacctttaccctccagaggtcaccgtc
cctcagaccccaccgtccaccccgccgaccgccaaacctcggtcccagaagcccgccgag
cccgacacgagccacgaccgagagcgggaacagtccaagctgaaacgttcctactcttct
ccggacattagccaggaagtgagcgaggaggcgcagaaaaagacgaccgctccaaccgct
gctgcagtcatacccaccatcaacagagaaaccaaacctcccagtgtaaaggtttactct
aaagtggagagcgtgcggccgtctgcggctaagcttcgcaacctgaatccctccttcgga
ggcttgggcgcatcactgactggccttcgaaacctaggaaacacctgctatatgaactcc
atcctgcagtgtctctgcaacactcctcgcatggccgattacttcaataacaacttgtac
cttgaagacatcaacaggtccaacattcttggccataaaggggaggttgcagaggagttt
ggagtgataatgaaagcgctgtgggccggtctgtacaagtgcatcagtccccgggacttc
aagagcaccataggaaagatcaatgatcagtttgcaggctatgaccagcaggactcccag
gagctgctcctgttcctgatggacggcctgcatgaagacctcaacaaggccgacaacagg
aagcggtacaaggaggaagaaaacgaccacctggatgaccagaacgcggccaacgtggcc
tggaacaagcacaagttgctgaacgagtccatcatcgtggcgctgttccagggtcagttc
aagtccacggtccagtgtctgacctgccatcgcaaatcacgcacctttgagaccttcatg
tacctgtcgctgcctctggcctccaccagcaagtgctccctgcaggattgtctgaggttg
ttctctaaagaggaaaagctcaccgacaacaacaaggtgttctgcagacactgcaaagcc
cacagagattccaccaagaagctggagatctggaaggttcctcctattgtcctggttcac
ttaaaacggttctcctatgaaggcagatggaggcaaaaactacaaacatctgtcgatttc
cctctagacagtctggacctggcccagtatgttatcgggcccaagcagaacctgaggaga
tacaacctttatgccgtgtctaatcactacgggggcttagacggcggccactacacggcc
tactgtaagaactccctcaggcagcgctggtacaagttcgatgaccacgaagtgacggaa
atctcctcgtcttcggtcaagtcgtccgcagcctacatcctgttttactccaccctgtga
DBGET
integrated database retrieval system
