Xiphophorus maculatus (southern platyfish): 102229328
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Entry
102229328 CDS
T02923
Name
(RefSeq) oxygen-regulated protein 1
KO
K19538
retinitis pigmentosa 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102229328
04812 Cytoskeleton proteins [BR:
xma04812
]
102229328
Cilium and associated proteins [BR:
xma03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102229328
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
102229328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
102229328
NCBI-ProteinID:
XP_014324591
LinkDB
All DBs
Position
6:19399466..19408763
Genome browser
AA seq
2060 aa
AA seq
DB search
MSNTSIPDPPAEEMSSSSGQMLPSRPVQSVSEPSASKRVCFYKSGDYQFSGHRMIVTARI
FKTFDALLDALSKKVPLPFGVRTITTPRGTHFIKALEDLQDGGAYVCSDQKRVKPLNLEE
VNRRQVPWNATRPFNARRHKRQELKYHQFGRGTDPSNRPAKVTEKVAVRTPKKLTVIKNR
DPTVRRTIVLQRRTAPTFDALLDYLSQILQFPVLKLYSTDGRRVDGLAALILCSGIIVAA
GNEPFRLGNQRFHRAGQTAQIMYVEHVEPSTLNPRMQKDKSLSSGRGSRNFSVSSERFIV
NQINKSQKSSLNGYLHHPSGLSETEAHQHHAAMETCEPERIEDNEHVSDVVPHDDDIEKS
FRINQDGSMTVEMKVRLTIKEEEMLHWTTTLSRSGLNKKTVCASLSGSDNSSPDSNNAVA
KDSPGIEEDERKEENYHDGAARGVAFNEEHIYKGYSSTTLGRAKTRFKRTPTPGPQQVNE
RASVESVKMVTETGFQKSTLGHYSYMERTADGETTEGYCVVRHSSSNKPKPCRTTSSEAS
SKRSSVKSSGVAEVLQIQNGGMEVTETVMHIYESQGCYDNYVANEELSAGGTSLHGSPPV
AKSKPSTSSGPQSSSNDCDIDCNWQPPTTDSLERQKEEMLSLSSEAGSLTHQAANNLSSV
TENEAAGLQKVETVNKHNAAKSTKKKKIARPLFNEKSSVSTNSSDKKLQESIKGSSKHSK
YSSTDKLSSNASVGKKSLSSLERSKSSLTSKGTENSQSKKSIKDEKTKKDSVLLLNPGHA
KPSPQQKKSQNKIASNNGHNINTPTGRPQMKKNMSDILQAKKPLSPSQKTISRPKSMTEC
GLSLPKPPQELSESGSLPSLNPSSSEIHQYVENWLENANPDSVPYADEVITDGAETQAKV
VFKIGDDSESDEINQCQTSLNDAMKKSSSCLSVPLYHEGLASGAQQGEQRARGVCVSMPS
VRCDPENNENKLRLHKSVEALGTNDSEMSSSHLLSPKAKLRPVLRQVCSSIQCIRRTSTS
STGPTLQNSSSLPNFSTQVASVFGSSCKAFISFLSVMTLRDNIKGSQLGEGSQSRTPSEA
MLMMESLQKISAMEDEEEQRASLTDLQSRASSQLREYWKDFQILRERLESEPLSPRVSET
EFALDVVSDGGDAFEDQQMVLDELMEELNMPQDLREEIVSTIQQTKSFYPAEESTFVETV
RNQSDSEEDLERFVGDCEEETKDSPEPRSTTGDLTETNYENDDEVNPELATESLIMSERD
KELKNEKQETETVNNLGNNENVNADEEDDREELEREREIEMEVKTEMQGDSEEEKTSEGE
FVQKIEEVEEAMTGDEEVTQKRLEDEEEAVEETENADTIEDTDEREGAGETEEEGNNQDV
QTEENEEQDDDEVESIINEEEAEEEVMTEGQEDEEEEEEEEQEEGEEKGEEQDEEESKGS
LPGETEEEVEEEEETERKGDVIEMLEHENMDPDMMSNASTFTVEGKTDEEESEQIEEDVG
EKEEDEKGQLTDEVTEEKGEEEMENEEEKVKHQKDEETEKETNGEKCDKVEGEGNSLEDT
ETDLEKETPEDEEVMNESDNEQNAVAGKSVVEEERNVSEESESNQKLEQMEVVQKDEARE
GAILDEVDSFPDDQDCETIPEEASCVQHSNSCEETIDTLSKYSSEGQCEDKCTDTIHETD
EGGEEDRRNSLTNPVEISQELLDFVNDALQSYTLIFTYDTQGNVRIVPDNARVVQTKQSL
IPKPRKDSSYGLKCLPSPVTSDLSDYRPETSGSGGYKTQESVDIVSESGEEPLEKASSTE
RRMLEKRPSRLSPSSCSLKSGNSPPSSDEGTKASREDLSYFSAASSLKAETDAETQNPQN
APLSFDKDSADGVLIDRGRWLLKENHLIRKSPPVSLAMYGNLDSTSTDTGQENTSVDSPT
YTKTQHSPLAAISSSELEEMAKPLTPKCTYYNMPHGSDSDPFLEDVSIRSQKHDAGSIKA
RGFRVSPIVDTSKTWANRNGSLSSFASVEFKIPDRKVHPEVDSSAAMQPRRTSTGEQGAL
QAQDSLDSLHLRCGQYCPIL
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacacatctatcccggaccctccagcggaggagatgtcctctagcagtggacag
atgttgccctctcggcctgtgcaatctgtctcggagccttcagcttctaaacgggtatgc
ttctacaaaagcggtgactatcagttcagtgggcatcggatgatagtcactgcccgtatc
tttaagacattcgatgctctgctggacgctctttccaaaaaagtgcctctgccatttgga
gtacgaaccataactacacctcgaggaactcactttatcaaagctttggaagacttacag
gatgggggagcttacgtgtgttcggatcagaaacgggtgaagccattaaacctggaagag
gtgaaccgcaggcaggtgccttggaacgcgacaaggcctttcaatgcaagacggcataag
aggcaggagctcaagtatcatcagtttggcagagggactgatccaagcaataggccagcg
aaggtcactgagaaagtggcagtgcggacgcccaagaagctcacagttatcaaaaacagg
gatcctacagttagacgaaccattgtgttgcagagaagaacagcaccaacttttgatgct
ttgctggattacctctcccagatactccagtttccagtgctgaaactctattctacagat
ggcagacgggttgatggtcttgctgcacttatcttatgctctggaatcattgtggcagct
ggcaacgagcctttcagattaggaaaccagcgttttcacagagcaggccagacggcccag
attatgtatgtggaacatgtggaaccatcaacattaaatcccagaatgcagaaagataaa
tctttatctagtggaagaggctcaagaaacttctccgtgtcatcagagcgattcattgtc
aaccagataaacaagtcccagaaaagcagcttgaacggctacctgcaccatcccagtgga
ctgtctgaaacagaagcccatcagcatcatgcagccatggagacatgcgaacctgagagg
atagaagataatgagcatgttagcgacgtcgtccctcatgatgacgacattgaaaagtca
ttccgcataaaccaagacggcagcatgacagtagagatgaaagttcgtttgacgataaag
gaagaggagatgcttcactggacaaccacgctcagccgctccggccttaacaagaagaca
gtttgtgcctccctctctgggtcagacaacagctcacctgactcaaacaatgctgttgcc
aaagactccccaggtattgaagaggatgaaagaaaagaagaaaactaccatgacggagct
gcaaggggcgttgcctttaatgaagaacacatctataaaggttatagttccacaactttg
ggtagagcaaaaacacgatttaagcggactcctacaccaggcccacaacaggtgaatgag
agggcttcggtagagagtgtgaaaatggttacagagacaggatttcaaaagagcaccctg
ggacattattcgtatatggagagaactgctgatggcgagactaccgagggctattgcgtt
gtcagacatagcagcagcaataagcctaaaccttgtaggacgacgtcatcagaagcaagc
agcaaacgctcctctgtcaaatcatcaggggttgctgaggtccttcagatacagaatggt
ggaatggaggtcacggagaccgtgatgcatatttatgagagtcaaggttgctacgacaac
tatgttgcaaatgaggagcttagcgcaggtggcacttctttgcatggctcccctccggtt
gcaaaaagcaaaccgtccacttcctctgggcctcaatcatctagcaatgattgtgatata
gattgtaactggcagccgcccaccaccgactcactagagaggcagaaagaggagatgcta
tcactttcatcagaggcaggatctctaacacatcaggctgcaaacaatctgtcctcggta
actgagaatgaggctgccggcttacaaaaggtggaaacagtaaataaacataatgctgcc
aaaagtactaagaagaaaaagattgctaggccacttttcaatgagaagagttcagtttca
acaaacagctcagataaaaaacttcaagaaagcataaaaggctcctcaaaacatagtaaa
tattcatctactgacaaactgagcagcaatgccagtgtaggaaaaaagagcctgagttca
ttggagagatcgaaaagttcactgacgagtaaaggaacagaaaattctcagtctaagaag
tcaatcaaagatgaaaaaacaaaaaaggattcagtcttactacttaaccctggacatgct
aaaccaagcccacagcagaaaaaaagtcaaaacaaaatagcatcaaacaatggacacaat
attaacactccaaccgggaggcctcagatgaagaagaacatgtcagacattttacaagcg
aaaaagccactttcacccagtcaaaagacaatcagcaggccaaaatctatgactgaatgt
ggactatcattacccaaaccaccacaggaactgagtgagagtgggtctttaccttctctg
aatccttcttcttcagaaattcaccagtatgttgagaactggttggaaaatgccaaccca
gactctgtgccatatgcagacgaggtgattacagatggagcagaaactcaggcaaaggtt
gtatttaagataggtgatgactccgaatcagatgaaataaatcaatgccagactagctta
aacgatgccatgaagaaatcctcctcttgtttatcagttcctctttaccatgaggggttg
gcatcaggtgcacagcagggtgaacagagagcccgaggtgtttgtgtttcaatgccaagt
gtcaggtgtgacccggaaaacaatgagaataagctcaggttgcacaaatctgttgaagcc
cttggtacaaatgacagtgaaatgtcttcgtctcacttgttgagcccaaaggcaaagcta
aggccagtccttcgccaggtttgttcatcaattcaatgcatcagaagaacatctacaagc
agcactggtcccactcttcaaaattcaagcagccttcctaatttctcaacacaagttgcc
tcagtgtttggctcatcgtgtaaagccttcatctcattcttgtcggtgatgacgctgaga
gacaatattaaaggctcccaacttggggaaggtagccaatcaagaaccccatcagaggcc
atgctaatgatggagtctctccagaagatttctgctatggaagatgaagaagagcagagg
gcaagtcttaccgacttgcaaagcagagcatcttctcagctaagagaatactggaaggat
ttccagattttgagggagagacttgaaagtgaaccactttcccccagagtttcagagact
gagtttgctctagatgttgtctctgatggcggcgatgcattcgaggatcagcaaatggtc
ctagatgagctcatggaggagctaaacatgccacaagacctcagagaagagattgtttcc
acaatccaacaaaccaaaagtttctaccctgctgaggaaagtacttttgttgagactgtt
agaaaccagtcagattcagaggaagatttagagcgatttgtcggtgattgtgaagaggaa
acaaaagattcaccagagcctagaagtacaactggggacttaaccgagaccaattatgaa
aatgacgatgaggtgaatccggagttagccacagaaagtctgataatgtcagaaagagac
aaggaattaaaaaatgaaaagcaggaaacagaaactgtcaataatttaggaaacaatgaa
aatgtaaatgctgatgaagaggatgacagggaagaattggaaagggaaagggaaatagag
atggaagtgaaaacagagatgcagggggattcagaggaagagaagacaagtgaaggggaa
tttgtccaaaaaatagaggaagtagaggaagcaatgacaggggatgaagaggttacacaa
aagagactagaggatgaggaagaagcagttgaggaaacagaaaatgctgatacaattgaa
gatacggatgagcgggagggggcgggagagacagaggaggaaggaaacaatcaggatgtc
cagactgaagagaatgaggaacaagatgacgatgaagtagagagtataattaatgaggag
gaagcagaggaggaggtcatgacggagggacaggaagatgaggaagaggaggaggaggag
gagcaggaggagggggaagagaaaggagaggaacaagatgaagaggaaagtaaaggctct
ctccctggggaaacagaggaggaagtagaagaggaagaggaaactgagagaaaaggagat
gtaattgagatgcttgaacatgaaaacatggatcctgatatgatgtcaaatgcatctact
tttacagttgaaggcaagactgatgaggaggaaagtgagcaaattgaagaagatgttgga
gaaaaagaggaggatgagaaagggcagttaacagatgaggttactgaagaaaaaggagaa
gaggaaatggaaaatgaagaagaaaaagtcaaacatcaaaaagatgaggaaactgagaaa
gaaacaaatggagaaaagtgtgataaggttgaaggagagggaaatagtctggaggataca
gaaactgatttggagaaagaaacaccagaagatgaagaagttatgaatgagtccgacaat
gagcaaaatgcggtggcaggaaaatctgtagttgaagaagagaggaatgttagtgaagaa
agcgaatcaaatcagaaattagagcagatggaagtggtacaaaaagatgaggcacgagaa
ggagctattttggatgaagtggacagttttcccgatgatcaagattgtgaaacaatcccg
gaagaagcttcttgtgtgcagcacagtaatagttgtgaagaaacaattgacactctatct
aaatattcctctgaaggccagtgtgaggataaatgtacagacaccattcatgagacagat
gagggaggagaggaggatagaagaaacagtttaactaatccagtggaaatttctcaggag
ctacttgactttgtgaatgatgctctccagtcttacacgcttatatttacatacgacact
cagggaaatgttagaattgtgcctgataatgcgagagttgtgcaaactaagcaaagtttg
ataccaaaaccaagaaaggatagttcttatggtctaaaatgcctaccaagcccagtcacg
tctgatttatcagattacagaccagagacgtcgggcagtggagggtataaaactcaagag
tctgtagatattgtctcagaaagtggagaagagcctttagagaaagcaagcagcactgag
agaaggatgttggaaaaaaggccctccagactgtcaccttcaagttgctcattaaaaagt
ggaaacagccctccttccagtgatgaaggcactaaagcttcaagggaggatctctcttat
ttcagtgctgcaagctcattaaaagctgaaaccgacgctgaaacacaaaatccacaaaac
gcccctttaagctttgataaagactcagctgatggggttttgattgatcgagggagatgg
cttctaaaagagaaccatctcataaggaaatccccccctgtctctctagcaatgtatggt
aatctggacagtacatccacagacacaggccaggaaaacacaagcgtcgattccccaact
tacactaaaacccagcacagcccccttgctgccatatcctcctccgagctcgaggagatg
gcgaaacctctgactccaaagtgcacctactacaacatgccacatggaagcgactctgac
ccctttttggaagacgtcagcatcaggagtcagaaacacgacgcaggcagcataaaagca
agaggcttcagagtttcaccaattgttgacacttccaaaacttgggctaacagaaatggc
agcctgtcatcatttgcttcagttgagtttaaaataccagacagaaaagttcaccctgag
gttgactcctctgcagcaatgcagccaagaaggacatctactggtgaacagggtgcactg
caagctcaagactctttggactcactgcatttgagatgtgggcagtactgcccgatacta
tag
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