Xiphophorus maculatus (southern platyfish): 102229480
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Entry
102229480 CDS
T02923
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xma04054
]
102229480
Pattern recognition receptors [BR:
xma04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
102229480
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_1
LRR_9
DHU1_N
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
102229480
NCBI-ProteinID:
XP_005798876
UniProt:
M4A8J6
LinkDB
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Position
3:complement(3082076..3086727)
Genome browser
AA seq
978 aa
AA seq
DB search
MATLNYQLRLLGLFLCAVQLISSYSFKSCIADPYYILTSFKCQNRNNTKIIDIVKDLPES
AVNLTASFNPVQNIPNNSFAHLPNLQYLSLDKNQLNTIDPLAFQTLHQLKHLNLSFNNLS
HLSPLLFEDLHNLTTLSLTNNVLKVLPEDIFSNAANLKTLNLRNNNLTDFAAVVKSVSHL
TNLTILDLSSNNLTSLSDLNISLPQSLKVLNLYRNNLHTLGCNPSLLRFIQVLDLSFNSK
LSTTAFEGVDLRNVKILQLRSTSVKAVELLNISNINAGHVVFSGMGLKNDSLLVDLCTML
RRKLSWIKNIDLTHNGIHNTTHFSMSVCPKIIGALDLSNNDLKKVHCLDFLGKQVSIKTF
NAEHNHITSLESCKKTNFNNLKELSYRYNRILSVNGYAFSHMPKIEMLKLNINNVAFLHR
KALRGLKNLKTLRLDNNLLTDLFNDTFKDNYNLQTLNLRNNRISVIFNGTFMNLRSLTTL
DLGGNKITQIHSSGLDGLKSLSKFYLDGNNLKQIDSSLYRAFQDTLTVLDLQKNLIHFYK
KSVISPFVKLSKLRDLKLDSQRNYGLVVLPQNFFKGLHSLQSLYLTNNKIDFLPPEAFDD
LTSLKFLTLDNCCVGVAQLKPGVFKNVRNLTRLVVENMGIQNFSKDVFGNLTQLRMLQLN
RNVMQSISVDALESLPKLQYLDMRNVPLSCTCKNSLLQNYTVNNPNVQIVYLYEMKCQAD
KKFKFHNFDTKVCYIDQGKYLFFSTAVVIFLFTVSPLLYVKLYWKIKYSYYVFRSWFSDH
WSRLREKEEKCTYDAFISYNFSDEEWVMNQLLPNLEGNGSSFKLCLHHRDFEVGRNIVDN
IVTAVYSSRKTICVVSNNFLRSEWCSLEIQLASYRLFDEHRDVLLLVFLEPISERQLSSY
HRMRKVMLKKTYLQWPGPDCTDPSQAQELFWSQLRRAIRAGNRLETEENDTDEDFARTSN
ETGNYKKLLSDDEDYLQP
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggccactctgaattatcagcttaggctgcttggactttttctgtgtgcagttcaactc
atcagcagctacagctttaaaagctgcattgcagatccatactacatcctgacaagtttc
aaatgccaaaatcgaaacaacacaaaaataattgatatagtaaaagatctcccagaatcc
gctgtcaatctcacagcttctttcaaccctgtgcagaacattcccaacaacagctttgct
catttaccaaacttgcagtatctcagtttggataagaaccagctgaatactattgatcct
ttggcttttcagacactgcatcaacttaagcatctaaatttgtcctttaacaatttgtca
cacctcagccctttattgtttgaggacctgcataacctcaccaccctctcgctgacaaac
aacgttttaaaggtattgcctgaagacattttctccaacgctgctaatctaaaaacctta
aatctcaggaataacaatcttactgattttgctgcagttgtgaagtctgtatcacatcta
acaaatctaacgatcttagatctttcctccaacaacttgacttcactcagtgatttaaat
atatctctaccacaatccctcaaagttttaaacctatatagaaacaatctgcatactttg
ggatgtaatccatcactcctcagattcatccaggtgcttgatctgtcatttaattcaaag
ctttccacgacagctttcgaaggagtggatttgagaaacgtaaagattctccagttgcgg
tcaacaagtgtcaaggcagtggagcttttaaacatcagcaacatcaatgcaggtcatgtt
gttttctcagggatgggtctaaagaatgacagtctacttgtggatttatgcacaatgctg
agaagaaagctgagttggattaaaaatatagatttaacacataatggcattcataataca
acacatttttccatgtccgtttgccctaagatcattggagctttggatttatccaacaat
gatctgaaaaaagtacactgcttggactttttaggcaaacaagtcagtatcaagacgttt
aatgcggagcacaaccatattacttcactcgaaagctgtaaaaagaccaattttaacaac
ttaaaagaactgagctaccgttataatcgcatcctctcagtcaatggatatgctttcagt
cacatgccaaagattgagatgctaaagctaaacataaataatgttgcttttctccatcgc
aaagccctaagagggctgaaaaatcttaagaccctccgactggacaataacctccttact
gatttgtttaatgacacatttaaagataattacaacctgcaaacactcaatctgcgcaat
aatcgcatttctgtcatatttaatgggacttttatgaacctaagaagtctaactacattg
gaccttggaggtaataagatcacccaaatacattcttctggccttgatgggttaaaaagt
ctttcaaaattctacctagatggaaacaacctgaaacaaattgactcgtcactctaccgt
gcattccaagacacacttacagtgctggatttacaaaaaaatctcattcatttctacaaa
aaaagtgtcatttcaccatttgtaaaactcagcaaactcagagatctgaaactggacagc
cagagaaattatggccttgttgttttacctcaaaatttttttaaaggactccactcgcta
caatctttgtacctcaccaacaacaaaatagattttcttcctcctgaagcttttgatgat
ctgacaagcttaaaattcctcacactggataactgttgtgttggagtggcccaattaaaa
ccaggagtcttcaagaatgtcagaaatttgaccaggttggttgtagaaaatatgggaatt
cagaacttctccaaggatgtatttgggaatcttacacagctacgcatgcttcagctaaat
cgtaatgtgatgcagagcatttctgtagatgctcttgagagtttacctaaactccagtat
cttgacatgcgtaatgtccctcttagctgtacctgcaaaaacagccttctgcaaaattac
acagtaaataacccaaatgttcagatagtctatctctatgaaatgaaatgtcaagcggat
aaaaaattcaaatttcacaactttgatacaaaggtttgctatattgatcaaggaaagtat
ctgtttttcagcactgcagttgtgatctttctatttacagtctctcctttactttatgtc
aaactgtactggaaaatcaagtacagctactatgtgttccgctcctggtttagtgatcac
tggagcagactcagggagaaggaggaaaagtgcacatatgatgctttcatctcctataat
ttctctgatgaggagtgggtcatgaatcagttgttgcccaacttggagggaaatggatcg
tcttttaagctctgcctgcatcacagggactttgaggtgggtcgcaacattgtggacaac
atcgtcactgcagtgtacagcagcagaaaaaccatttgtgttgtgagcaataacttcctc
cggagtgagtggtgctctctggaaatccagctcgcaagttacaggctcttcgatgaacac
cgagacgtccttctgctcgtgtttctggagccaatttctgagaggcagctgtcatcctac
caccgcatgaggaaagttatgttgaaaaagacctatcttcagtggcctggccctgactgc
actgatccctcacaggcccaagagctgttctggagtcagttacgcagggcaatcagagca
ggcaacagactggaaaccgaagaaaatgacacagatgaagactttgctcgaaccagcaat
gaaacaggaaattataagaaactcttatcggacgatgaagattatttgcaaccttaa
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