Xiphophorus maculatus (southern platyfish): 102229557
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Entry
102229557 CDS
T02923
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102229557
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102229557
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
102229557
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
102229557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Adaptin_N
HEAT_2
Cnd1
Sec7-like_HUS
ParcG
MOR2-PAG1_C
MMS19_N
HEAT_DAAF5
MMS19_C
TAN
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
102229557
NCBI-ProteinID:
XP_023185214
Ensembl:
ENSXMAG00000000776
LinkDB
All DBs
Position
24:14449404..14475200
Genome browser
AA seq
1591 aa
AA seq
DB search
MEEDEEEKMSSMEDLLDLVLQKDLGRRLQVGPEITELLLHPDRCPGLDQDQNLLDRMVDA
LASSWVNSSNYKVVLLGMEVLSALVDRLQERFRTQVGTVLPSLMDRLGDSKDQVREQDQA
LLLKVMDQSANPQYVWERMMGGFKHKNSRTREGLCLCLISTLNVFGSQSLTLNKIVPHIC
NLLGDPTSQVRDAAMSCLVEIYRHVGERVRIDLGKKGLPQSRLNMIFSKFDEVQRSGVMV
PSPLSDKTFEDDESVDGGRSSSRAASVSGRKAVSMGSFRRPSSASSSKSAGRDGSSAGAV
DEEDFIQAFEDVPTVQIYSNREVEEAMTKIRDVLSDDKKDWELRVAALKKLRSLLLAGAP
EFDCFLQQLRLLEASFKLSAKDLRSQVVREACITLGHLSAVLGSRFDHAAEAIMPPLLNL
VPNSAKVMATSGVAAIRLILRHTHCPRLVPIISISCSSKSVAVRRRCFEFVDLMLQEWQT
SSLDRHGAMLMETIKKGIHDADAEARSVARKCYWSYQGHFSREAELLFQGLESAYQRALQ
AHLRSGDALVSLPASDRSSSSSQESLNRPLAMKSSAGSSSSRGQHQGQHLGSAPRRPGAV
SSPGALQRSRSDVDVNASASARSRMPAVSAAAALPPGSYASLGRVRTRRTSAGTGATATD
GRSRGKVVSQSQPGSRSGSPGRLLSSTYGRILRPAAGSNGAPCSVSDKTRPRGHRSQGCS
RETSPSRTAAARSRIPRPSMSQGCSRETSRESSRDTSPARGFSPLASRPHSRSTSALSSA
EGCSDRLAHQARISASVNAMRVLNTGTEVEAAVADALLLGDSRSSKRRPVRRRFESPGIY
SDDDANSDASSACSERSFGSRNGGAGPHFLRQTEDVAEVLNHCASSNWSERKEGLLGLQN
LLKGQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIVLHRDDLQDWLFVLLT
QLLKKMGADLLGSVQAKVQKALDVTRDSFPLELQFNILMRFIVDQTQTPNLKVKVAILRY
IEALARQMDPADFVNSSETRLAVSRVITWTTEPKSADVRKTLHTWAGEDRSSAASLPREG
HLEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGTTKLLHSHLRSASAGIAMAAP
GDWAGRTPPRPPGGRSSPLTSPTNHGGLSPSRLWGWSADGLSKYPPLPPFPSPLPPTASL
KALRRAYSPSMLEYDSENLNTEDLYGSLRGVSEAIQNFSFRSQEELVEPLRRDGKRDGTA
GVAAALDPERRFCGDVTEGGRTALDNKTSLLNTPSPRSFSGPRFREYNPYNYTDGSPEKP
GPEDGAEPQRDGRRQECGENKTQNAKSFPAGSAEQLELVGQLLKELSQAGDQEDRRGTLL
ELLKVARQDSLLVWDEHFKTLLLLLLETLGDKDHSVRALALRVLKEILRNQPARFKNYAE
LTIMKTLEAHKDSHKEVVRAAEEAASALAGSIHPEQCIKVLCPIVQTTDYPVNLAAIKMQ
TRAVERVCREPLLQLLPDVVPGLLQGYDNTESSVRKASVFCLVAVYAVIGEELKPYLSQL
TGSKMKLLNLYIKRAQTSTSNSSSSSDISSY
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgaggaggagaagatgagcagcatggaggacctgctggacctggttctg
cagaaagacctgggccggcggctgcaggtggggccggagatcaccgagctgctgctccac
ccggaccgctgtcccgggctggaccaggaccagaacctgctggacaggatggtggacgcc
ctggccagctcctgggtcaactccagcaactacaaggtggttctgctggggatggaggtt
ctgtcggctctagtggaccggctgcaggagaggttccggactcaggtgggaacagtcctg
cccagcctgatggaccggctgggcgactcgaaggaccaggtgcgggagcaggaccaggcg
ctgctgctgaaggtcatggaccagtcggccaaccctcagtacgtctgggagcgcatgatg
ggagggttcaagcacaagaacagccggaccagagaggggctctgcctctgcctcatctcc
accctcaacgtgtttggctctcagagtctgacgctgaataaaatcgttcctcacatctgc
aacctgctgggagacccgaccagtcaggtccgtgatgcagccatgtcctgcctggtggag
atctaccgccacgtaggagagcgagtgagaatcgacctggggaagaaagggctgcctcag
tcacggctcaacatgatcttcagtaagttcgacgaggtccagaggtcaggggtcatggtg
ccgtctcctctgtcagataaaacctttgaggacgatgagtcggtggacggcggacgttcc
tcgtccagagcagcctctgtgtctgggaggaaggcggtgagcatgggctcgttccgacgg
ccgtcctcggcctccagcagcaagtctgcagggcgggacggatcgagtgcaggagctgtg
gatgaggaggatttcatccaagcctttgaggacgttcccacagttcagatctactccaac
cgggaggtggaggaggccatgacgaagatccgggacgttctgtcggacgataagaaggac
tgggagctgagagtggccgccctgaagaagcttcgctcgctgctgctggccggagcgccg
gagttcgactgcttcctgcagcagctgcggctcctggaggcgtccttcaagctgtccgcc
aaagacctgcggtctcaggtggtccgggaggcctgcatcacgctgggccacctgtcggcg
gtgctgggcagccgcttcgaccacgccgccgaggccatcatgccgcccctcctcaacctg
gtgcccaacagtgccaaagtcatggccacgtcgggcgtggccgccatccgcctcatcctc
agacacacacactgtcctcgcctcgtccccatcatcagcatcagctgctcctccaagtct
gtggctgtcagaagacgctgctttgagtttgtggacctgatgctgcaggagtggcagacc
agcagcctggacagacatggagcgatgctgatggagacgataaagaaggggatccatgac
gctgatgctgaagctcgatctgtagccaggaagtgctactggagctaccagggtcacttc
agccgggaggcggagcttctgttccagggtctggagtcggcctatcagagagctctgcag
gcccacctgcggagcggagacgccctggtgtcgctgccggcctccgaccgctcctcgtcc
tcgtctcaggagagcctgaatcggccgctggccatgaagagctcagcaggaagcagcagc
agcagaggtcaacatcaaggtcaacatctaggcagcgccccccgcaggccgggagccgtc
tcgtcccccggcgctctgcagcgatcccgcagcgacgtcgacgtcaacgccagcgccagc
gcccgcagcaggatgcccgccgtcagcgccgccgccgctcttcctcctggatcctacgct
tcgctggggcgagtccggaccaggaggacgagcgccggaaccggtgccacggcgacagac
ggccggagccgagggaaggtcgtctctcagtcccagcccggcagccggtccggttctccg
ggccgcctgctcagctccacgtacggccggatcctgaggcccgccgcaggcagcaacggc
gccccctgcagcgtgagcgacaagacgcgaccccgaggtcaccgcagccagggctgcagc
cgagagaccagtccgtccagaaccgcagccgcccggagtcggatccctcggcccagcatg
agtcagggctgcagccgggaaaccagtcgcgagagcagccgcgacaccagccctgccagg
ggcttctccccgctggccagccggcctcattcccgttccaccagcgccctgtcctctgca
gagggctgctcagaccggctggcccaccaggcccggatctcggcctccgtcaacgccatg
cgggtcctgaacacgggcaccgaggtggaggcggccgtggccgacgctctgctgttggga
gactccaggagtagtaagcggcggcccgtccggcggcgcttcgagtctcccgggatctac
tctgacgacgacgccaacagcgacgcctccagcgcctgctccgagcgctccttcggctcc
aggaacggcggcgccgggccccacttcctgcggcagacggaggacgtggcggaggtcctg
aaccactgcgccagctccaactggtcggagaggaaggagggcctgctgggcctgcagaac
ctgctgaagggccagaggacgctcagccgtgtggagctgaagagactctgtgagatcttc
accaggatgtttgcagatccgcacagcaagagagtgttcagcatgttcctggagacgctg
gtggacttcatcgtcctgcaccgggacgacctgcaggactggctcttcgtcctgctcact
cagctactgaagaagatgggcgccgacctgctgggctcggtccaggccaaggtccagaag
gctctggacgtcaccagggattcgttccccctggagctgcagttcaacatcctgatgcgc
ttcatcgtggatcagacccagacgcccaacctgaaggtcaaggtggccatcctgcgctac
atcgaggctctggcccgacagatggacccggccgacttcgtcaactccagcgagacgcgc
ctggccgtctcacgcgtcatcacctggaccaccgagcccaagagcgccgacgtccgcaag
acgctccacacctgggcaggtgaggatcgcagctccgccgcctctctgccccgggagggg
catctggaggagaggtgcaagcaggcggcccaggtggttctgatcgccctgtttgagctc
aacaccccagagttcaccatgctgctgggagcgctgcccaaaaccttccaggacggaacc
accaagctgctgcacagccacctgaggagcgccagcgccggcatcgccatggcggctcca
ggcgactgggccggccggacgcctccccgcccccccggcggccgcagcagccctctgacc
tcgcccaccaaccacggcggcctctcccccagtcggctgtggggctggagcgccgacggc
ctctccaaataccctcctcttcctcccttcccctcccctcttcctcccactgcctccctc
aaggccttacggcgagcgtactctcccagcatgctggagtacgacagtgaaaacctgaac
accgaggatctgtacggctccctgcgcggcgtctctgaggccatccagaacttcagcttc
cgcagccaggaggagctggtggagccgctgcggcgggacgggaagcgggacggaacggcc
ggcgtggcggcggcgttggacccagagcgccggttctgtggcgacgtgacggagggcggc
cggacggctctggacaacaagacgtccctgctgaacacgccttcgcctcgctcgttttcc
gggccgcgcttcagggagtacaacccctacaactacacagacggctcgccggaaaagccc
ggcccggaggacggcgccgagccgcagagagacggccggcggcaggagtgcggagaaaac
aagacgcagaacgccaagagctttccagccgggtcggcggagcagctggagctggtgggg
cagctgctgaaggagctgtcccaggccggggaccaggaggacaggcgggggacgctgctg
gagctgctgaaggtggcccgccaggacagcctgctggtgtgggacgaacacttcaagacc
ctgctgctgctgctgctggagacgctgggcgacaaagaccactcggtccgggcgctggct
ctccgggttctgaaggagatcctgcggaaccagccggcccggttcaagaactacgcagag
ctgaccatcatgaagacgctggaggctcacaaggactctcacaaagaggtggtgcgtgcg
gccgaggaggcggcctccgccctggccggctccatccacccggagcagtgcatcaaggtg
ctgtgccccatcgtccagaccaccgactaccccgtcaacctggcggccatcaagatgcag
actcgcgcggtggagcgcgtctgcagggagccgctgctgcagctgctgccggacgtcgtc
cccggcctgctgcagggctacgacaacacggagagcagcgtccgcaaggccagcgtcttc
tgcctggtggccgtctacgccgtcatcggagaggagctcaagccctacctgtcccagctg
accggcagcaagatgaagctgctgaatctctacatcaagagagctcagacctccaccagc
aacagcagcagctcctccgacatctcctcctactga
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integrated database retrieval system
