Xiphophorus maculatus (southern platyfish): 102229558
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Entry
102229558 CDS
T02923
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03030
DNA replication
xma03410
Base excision repair
xma03420
Nucleotide excision repair
xma03430
Mismatch repair
xma04110
Cell cycle
xma04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102229558 (pcna)
03410 Base excision repair
102229558 (pcna)
03420 Nucleotide excision repair
102229558 (pcna)
03430 Mismatch repair
102229558 (pcna)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102229558 (pcna)
09144 Cellular community - eukaryotes
04530 Tight junction
102229558 (pcna)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xma03032
]
102229558 (pcna)
03400 DNA repair and recombination proteins [BR:
xma03400
]
102229558 (pcna)
DNA replication proteins [BR:
xma03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
102229558 (pcna)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
102229558 (pcna)
MMR (mismatch excision repair)
Other MMR factors
102229558 (pcna)
TLS (translesion DNA synthesis) factors
Other TLS factors
102229558 (pcna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Herpes_UL42
Motif
Other DBs
NCBI-GeneID:
102229558
NCBI-ProteinID:
XP_005794922
Ensembl:
ENSXMAG00000014891
UniProt:
M4AKD0
LinkDB
All DBs
Position
12:complement(11086398..11090040)
Genome browser
AA seq
260 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRHDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNI
KLSQTSNVDKEDEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHIKYYLAPKIDEEAS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggctcgcttggtccagggctccatcctgaagaaggttctggaggcgctgaaa
gacttgatcacagaggcctgttgggatgtcagctcgtccggcatctccctccagagcatg
gactcgtcgcacgtctccctggtgcagctcaccctgcggcatgatggcttcgactcttac
cgctgcgacagaaacttggcgatgggggtcaacctcagcagtatgtcaaagatcctgaag
tgtgcaggaaacgaggacatcatcaccctcagagcagaagacaacgcagacacgctcgct
ctcgttttcgaaaccctcaatcaggagaaagtctcagattatgagatgaagctgatggac
ttggatgttgagcagcttggtattccagagcaggagtacagctgtgtggtgaagatgccc
tctggagagtttgcccgtatctgccgcgacctgtcccagatcggcgacgccgtcatgatc
tcctgcgccaaagacggcgtgaagttctctgcctccggagagctgggtaccggaaacatc
aagctgtcccagaccagcaatgtggacaaagaggatgaggctgtcacaattgagatgaat
gagccggtccaactgatctttgccctgaattacctgaacttcttcacaaaggccacaccg
ctgtccaaaaccgtcaccctcagtatgtctgctgacattcccctcgtggtcgagtataag
atcgccgatatgggacacatcaagtactacctggccccgaagatcgacgaagaggcttcc
taa
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