Xiphophorus maculatus (southern platyfish): 102229612
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Entry
102229612 CDS
T02923
Symbol
rnf17
Name
(RefSeq) RING finger protein 17
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102229612 (rnf17)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102229612 (rnf17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-C3HC4_4
DUF6909
zf_RING_Vps8
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
102229612
NCBI-ProteinID:
XP_014326979
LinkDB
All DBs
Position
7:complement(6548611..6572840)
Genome browser
AA seq
1591 aa
AA seq
DB search
MMEKGDSPSAAICKLCGNAFKLPEDETDGNLPRILACGHIFCTNCLVSIQCEGAIRCPDC
EFFATLPEGGVNGLQEESRIIGLIYTAEMNQIKSLRCNGPKVCQKNRSSPRATTISNSDV
VKQAADIEKIEKTVDESLVQAAENLAQLENIYETLTADLAEQVKRERTRLEMEITQASNK
AVHAIQKWKATQLNQLKKMETRFPSSQAVVSHVQERIKALEIAMQMAREIRRVPFLEQYC
ILDKVLETLQTPVDQMAIDLKCITDGTGMSCVFQSENVSRCLMLSLKMEACGSNAVTKQL
VGSHQSNISIKSSSRKHFKHRNGCSNLPSSKPEKWEPESQGASRSSAQGTHLVPQPGPKI
SLSPHSSFSDLGSPDVIIEEFFDDNPEPVTPTGPEMANNEWRTQKRRKCHLLRDKKCKEV
THWVVVTHVVNPSHFYVRYVAEKKESEVLSRNINKLCFGEGCQFTLGDTMERGSVVFVKW
KEVVWCRATVVEVFQKSCVKAVKACPVTQLASLRVFFPDYGFTKSITIQSEEAAAESLLK
AVNNHLRKVAESVNIELKNFAPQAVRCSLKDLVPYNLTEGWSEEAKAEFCCVVGSAAVEM
RPLGQDRDSLLVDLRKAPLEQSTDVPISVREYLVFIEVARFYSPVTLGRKPLMYYSPVYP
EASTELDAVVSHINNLSDFYIQLVDNMESLLLSAKLQDYYNALKDEEFRVYCPAIGQACV
ARFEDKLWYRAQVISHPGGRKVEVRYVDFGNKQVLSVSDLRKIKDEFFALPAMAVHCCLA
DVTPLDGESWSEACTKRFISLAHQQLVTVMAKGKVPKTEPLPLGVFVGGVNQPKTSIAEL
LVKENLVSFKESKQSTKSKKPSRPESTVWDPPLELGAGAVKAESSGHVTIEEQIDDPVEL
QAQLKLPDQRKDLQVMVTHVNSPSSFYVRLTNSDPQLKRICELVKQECALMEPQEVVWKA
DMYCAANINGVWERGRICSDVTSNNIAEVRRCDHGNKVKIHVSNLYPLPSSLIGSLAIEC
TVNDIRPTGGRSTWTDTACDLISYYLTGASALMTIKEETEEHPLPVTLSCSNRMGEYISI
ADFLVDEGLAFRERKPKATAVQKPKVTDTQTPATDPESCEKEKSTSPPSVSPFPSTQSAS
IPPKPFPRSIITAEKVKTSMYNPPELPCPGHILINVSAIGDDGVIYARTQSAEYQIEQLK
EGIQKSIKTLPRQKPYTWKLVQGCAVIGPDMLWYRGQVLELLGGHVKVQYVDYGLVENIP
VVHVYPMLLCVEVPQLCMPCQLFGINPVGGKWQRDGVALMREVLLNRSVGMQVVALPAEP
RGAVTVEIFLDGMSLSRILCHNEHASMDGALSTEKSLVVMPPASMLDVWDINTESLMGPE
EPVLGSFVSPNLPLEGEHFEVRVTHLWTPNELFLWPLKDMAGSEMMDDSLDEALTRINAN
ITSLPRLTSFPYGGPCLAEYSDGKYYRARLMKFTSIEPLVILVQHVDFGSDDSLPTSKLR
QMPSELLLFPTRAIKVKVAGFKAPSVERRGDVLPYCPAWSVKAVMEMTDLLHNNITATVV
SREPELKVQLYNEDRELVHLPLVNSGLAELD
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaaaggagacagtcccagtgctgcaatttgcaaattatgtgggaatgcgttt
aaacttccggaggatgaaaccgatggtaatctgccccgtatacttgcatgcggccacatc
ttctgcacaaactgccttgtgtctattcagtgtgaaggtgccataagatgtccagattgt
gagttttttgcaacccttccagaagggggggttaatggcctgcaggaagaaagcagaatc
ataggtctgatttacactgctgagatgaaccagatcaaaagcctccgctgcaatggacca
aaggtgtgccagaagaacagatcatcacctcgtgcaaccactatttccaacagtgacgtt
gtgaagcaggcagcagacattgagaagattgagaagacagtagatgagtcattggtccag
gctgcagaaaatcttgcccagttggaaaacatctatgagaccctgacagctgacctggca
gagcaggtgaagagagagagaacccgactggagatggagatcacccaggcctcaaataaa
gctgtgcacgcgattcagaaatggaaagctacacagttgaaccagctaaaaaaaatggag
acacggtttccctccagccaggcagtggtgtcccatgtccaggagaggattaaagctttg
gagatcgccatgcagatggccagagaaatacgccgggttcccttcttggagcagtactgc
atcctggataaggttttagaaacactgcagacaccagtggatcagatggccattgatttg
aaatgcatcactgatggaactggaatgagctgtgtttttcagtcagagaacgtgagccgg
tgtttgatgttgtctctgaaaatggaggcctgcggctcaaacgctgtaaccaagcagcta
gtgggaagccaccaatcaaacatctccatcaaaagctcttcaaggaaacatttcaagcac
agaaacggctgctccaatctacccagtagcaagccagaaaaatgggagccagagagccaa
ggggccagtagatcatcagctcaagggacccatctggtcccacaacctgggcctaagatc
agcctttccccccacagctcgttctcagaccttggaagcccagatgtgattattgaggaa
tttttcgacgataacccagagcctgtgactccaactggacctgaaatggccaacaacgag
tggagaacccaaaagagacgaaaatgtcacctgctccgtgacaaaaagtgtaaggaagtt
actcactgggtggtggtgacccatgtggtgaatccaagtcacttctacgtccgctatgtg
gctgagaagaaggaaagtgaggttctgtcaaggaatattaacaaactctgctttggagaa
ggttgccagtttacactgggagacaccatggagagaggctccgtggtctttgtgaagtgg
aaggaggtggtgtggtgccgcgccacagtggttgaagtctttcagaaaagctgtgttaag
gctgtgaaggcctgtcccgtcacccagctggccagtttgcgggtcttcttcccagattat
gggttcactaaaagcatcaccatccagtccgaggaggcggctgccgagtctttacttaaa
gctgtgaacaaccacctgaggaaagtggctgaatctgtgaacatagaactgaaaaacttt
gctcctcaggccgtaagatgttcactgaaagacctggtcccatataacctgacagagggc
tggagcgaagaggcaaaggctgagttctgctgtgtggttggatctgctgctgtggagatg
cgacctttgggtcaggacagagactctttgttggtggatctaagaaaagctcccttggag
caatccactgacgttcccatctccgtcagggagtacctcgttttcatcgaggtggctagg
ttttactccccagtgacactgggcaggaagcctctgatgtactactcgcctgtgtatccg
gaagccagtacagagctcgatgctgtggtcagccacatcaacaacctctcggacttctac
atccagctggttgacaacatggagtccctgttgctgtcagccaagcttcaggattactac
aatgcactgaaagacgaggagttccgggtctactgccctgcaataggacaggcttgcgtt
gctcgttttgaagacaagttgtggtacagagctcaagtcataagccatcccggtggacga
aaggtggaagttcgatatgttgactttggcaataagcaagttttgtcagtcagtgacttg
aggaagatcaaagatgagttctttgctcttcctgccatggcagttcactgctgtttggca
gacgttactcctttagacggagagagttggagtgaagcctgcaccaaaagattcatcagc
cttgctcaccaacaactggtcactgttatggcaaaaggaaaagtacctaagactgagcct
ttgccccttggagtgtttgtgggtggagtgaaccagccaaaaaccagcatagctgagctg
ctggtgaaagaaaatctggtctcctttaaagagagcaagcagagcaccaaaagcaaaaag
ccttctcgtcccgaatccactgtctgggatcctccgctcgagctgggcgcaggtgcggtg
aaagccgaatcttcgggtcacgtcactattgaggagcaaatcgacgaccctgtggagctg
caggcgcagttgaagctgccggatcagcgcaaagacctccaagtcatggtcactcacgtc
aactcaccaagcagcttctacgtccgactcaccaattctgaccctcagcttaaaagaata
tgcgaactggtgaagcaggagtgtgccctaatggagccgcaagaagttgtgtggaaggcg
gacatgtactgcgctgccaacattaatggagtctgggagagaggacggatctgcagcgac
gtcacatcaaacaacattgcagaagtcagacggtgtgaccatggcaacaaagtgaagatc
cacgtcagtaacctgtacccacttccgtcctctttgatcggctccctggcaatagagtgt
actgtgaatgacatcaggccaacaggcggccgatcgacctggacagacacagcctgtgac
ctgatctcctactacctgacaggagcttcagctttgatgacaatcaaggaggagacagag
gagcatccgttgcccgtcacgttgtcctgctccaacagaatgggagagtacatcagcatc
gccgacttcctggtcgacgaaggcctcgccttccgggaaagaaagccaaaggccacagct
gtccaaaagcccaaagtaactgatacccagactccagccactgacccagaaagttgtgaa
aaagagaaaagcacctcccctccatctgtttctcctttcccttccacccaatctgcttcc
attcctccaaaaccattccctcgctcaattataacagctgaaaaggtgaagacttcaatg
tacaaccctccagagctgccgtgtcctggtcacatcctcatcaatgtttctgctattgga
gacgatggtgtcatttatgccagaacacagagtgcagagtatcaaattgaacaactgaag
gaagggattcagaagagcatcaagacgttacccagacagaagccctacacctggaagttg
gtccagggctgtgccgtcatcggaccagacatgttgtggtaccggggacaggtgctggag
ctgctgggaggtcacgttaaggtacaatatgtggactacggtctggttgagaacatccca
gtggttcatgtgtatcccatgctactgtgtgtggaggttcctcagctctgcatgccctgc
cagctctttggcatcaaccctgttggtgggaaatggcaacgagacggagtagctttgatg
agggaggtgttactgaaccgatccgtgggcatgcaagttgtggcgctgccggctgagccc
cggggggctgtcaccgtggagatcttcctggatgggatgagtctcagcaggattctgtgt
cacaacgaacacgcctccatggacggcgctctctcaacagaaaagagtctggtagtgatg
cctcctgcctccatgctggatgtctgggatatcaacactgagagtctaatgggcccagaa
gagccagtgttggggtcctttgttagcccaaacctgccactagagggagaacactttgaa
gtcagggtcacacatttgtggacccccaatgagctgttcctgtggcccctgaaggacatg
gctggctcagagatgatggacgattctttggacgaagctttgactagaatcaatgcgaac
atcacctctttgccccgactgaccagctttccatatggtggtccatgtttggcagagtac
agcgatggcaagtactaccgggccaggctgatgaagttcaccagcatagagcctctcgtg
atcttggttcaacatgtagatttcggatctgacgactctctgccaaccagcaagctgcga
caaatgccatctgagctgctgctgtttccgacacgcgcaataaaagtcaaagtcgctggc
ttcaaggcgccgagcgtggagcggcgcggagacgttctgccgtactgccctgcgtggagc
gtgaaggctgtgatggaaatgacagatctgctgcacaacaacatcacagcaactgttgtt
tcacgagagccagagctcaaagttcagctgtacaacgaggacagagagctggtccatctg
cctctggtgaacagcggattggctgagctcgactaa
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