Xiphophorus maculatus (southern platyfish): 102229675
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Entry
102229675 CDS
T02923
Name
(RefSeq) guanine nucleotide exchange factor VAV3-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04510
Focal adhesion
xma04517
IgSF CAM signaling
xma04519
Cadherin signaling
xma04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102229675
04519 Cadherin signaling
102229675
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102229675
09142 Cell motility
04810 Regulation of actin cytoskeleton
102229675
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
SH3_1
CH
SH3_9
SH2
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
C1_2
SRA1
FaAP_C
LZ3wCH
Filamin
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-GeneID:
102229675
NCBI-ProteinID:
XP_023191967
Ensembl:
ENSXMAG00000000476
UniProt:
A0A3B5QC73
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Position
6:21743810..21800363
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AA seq
844 aa
AA seq
DB search
MEYWRQCAMWLIGCNVLPANHRVTADTAQVFDLAQTLRDGVLLCQLLNNLKPHTINLKEI
NLRPQMSQFLCLKNIRTFLSSCCDVFGMKKSDLFESFDLFDVRDFGKVMDTLSKLSHTAV
AQQGGFKPFPLEESLKDEEIYNNLEDLIDENVPEDEDDLYAAVYGLEDEYAGGEIYEDLM
RTEQHAPLKQAEVDVRSCCLSEIKQTEERYTETLESIEKYFLNPLKKFFSAAEIDKVFVN
IPDLVKVHKSLMGDLQDSILNKNALNLYQIFISYKERLLIYGIYCSRVEIAIAVLDLICK
EKEDVRLKLEECSKRANNGKFTLRDLLVVPMQRVLKYHLLLQELVKHTHDAADKSNLKIA
LDAMKDLAQYVNEVKRDNETLREIDQYQRSIENLNQPLVTFGRPKGDGEVRLVSNVDKRK
QDRHIFLFDVAAIVCKRRGDNYEMKDILDLNFFKITNNPTSDREGKKWCYGFFVTHQQGH
MGFELCFKTKELKKKWLDQFEMAISNIRPEKANHNSHQFKMHTFERITSCSYCHLLLRGI
FNQGYRCQKCGLGAHKECLGRLGACGRTVSVSHLPADPVKLRPKENTAPPGPGLPRMIVI
RDYSGIPSPQCGPPLSIQAGDVIELMFADLHSSWWQGKILATSKTGFFPSDAVRPCPCVP
KPVDYSSQLWFAGLMERYQAEEELIDRGNSTYLVRHRSKDCNEYAISIKFNDKVKHIKIL
TKDGCFYIAESRLFKTVLDLVEYYKQHSLKEGFSSLDTTLQVPYRELSNGIMPKAITKVG
NVISPRIVGIAVARYDFSSRDTRELSLQQGDIIRIYTKMTNGWWRGEVDGKVGWFPSTYV
DEED
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggagtactggaggcagtgtgcgatgtggctgatcggctgcaatgttctgccggcgaac
caccgggtcacggcggacacagcgcaggtgttcgacctggcgcagaccctgcgggacggg
gtgctgctgtgccagctgctcaacaacctgaagccccacaccatcaacctgaaggagatc
aacctgaggccgcaaatgtcacagttcttgtgcttgaagaacatcaggacgttcctgtct
tcctgctgtgatgtgtttggcatgaagaaaagtgacttatttgaatcctttgaccttttt
gatgtcagagattttggaaaggtcatggacactctgtctaagctctcccacacagcagtc
gcacagcaaggaggattcaagccgtttccactggaggagagcctgaaagacgaggagatt
tacaacaacctagaggacctgattgatgagaatgttcctgaggacgaagatgacttgtat
gcagcagtatacgggctggaagatgagtatgcgggtggagagatctatgaagacctcatg
aggactgaacagcatgcaccactgaaacaggcagaggttgatgtgcgcagctgctgcctt
tcagagattaagcagacggaagagcgatacacagaaacactggagtccattgaaaagtat
ttcctaaatccattgaagaaattcttctctgcagctgagattgacaaagtttttgtcaat
attcctgatttggttaaagttcacaagagcctaatgggagatctgcaagactccatcctg
aacaaaaatgccctcaatctctaccaaatcttcatcagctataaggaaagacttctcatt
tatgggatatactgcagtcgggtggagattgccattgctgttttagacctcatctgcaaa
gagaaagaagatgttcgcttgaaactagaggaatgttccaaaagggccaacaatgggaag
ttcacactgagggacctgctggttgttcccatgcaaagagtcctaaagtaccatctcttg
ctacaggaactcgtcaaacacactcatgatgctgctgataagagcaacctgaagattgct
cttgatgccatgaaggaccttgctcagtatgtcaatgaagtgaagagagataacgagact
ctgagggagatcgaccagtaccagagatctatcgaaaacctgaatcagccacttgtcact
tttggtcgaccaaaaggcgacggagaggtgcgcttggtctccaatgttgacaagaggaaa
caggacaggcacatatttttattcgatgtggcagccattgtttgcaagagaaggggagac
aactatgagatgaaggacatactcgatcttaacttcttcaaaattacaaacaatcccaca
tctgacagagaaggcaaaaagtggtgctacggcttcttcgtgactcaccagcagggacat
atgggctttgagctttgctttaagaccaaagagctgaagaagaagtggttggatcagttt
gaaatggcaatctcaaatatccgaccagaaaaggctaaccacaactcccaccagttcaag
atgcacacatttgaaagaatcacttcctgtagttactgtcaccttttgctcaggggcatc
tttaaccagggctatcggtgtcaaaaatgtggcctgggggctcataaagagtgtctgggt
cgactgggagcctgtgggagaacagtgtctgtttcccacctgcctgcagatcctgtcaag
ctgaggcccaaggagaacacagcaccgccaggcccaggtttaccgaggatgattgtgatc
agagactacagcggcatccccagcccccagtgtgggcccccactaagcattcaggcaggg
gatgtaattgagttgatgtttgctgacctgcacagctcctggtggcagggcaaaattctg
gcgacaagcaagactggcttctttccaagtgatgctgtgaggccttgcccatgtgttcca
aaacctgtcgattattcttcccagctttggtttgcagggctaatggagagataccaggct
gaggaggagctcatcgacagagggaacagcacttatctggttcgacaccggagcaaagac
tgcaacgaatatgccatcagcataaagttcaacgataaagtgaagcacattaagattctg
accaaggatggatgcttttacatcgctgagagtcgcctgttcaagactgtgctggacttg
gtggagtactataaacaacactcactgaaagagggattcagcagccttgacaccactctg
caggttccttaccgagaactgtccaatggaatcatgcctaaggccattaccaaggttggc
aacgttatttctcccaggatagtcggtattgcagtggcacgttacgacttcagctccaga
gacacgcgggagctctctctgcagcagggagacattatcaggatctacaccaagatgacc
aatggctggtggaggggagaggttgatggcaaggtgggctggtttccctcaacttatgtg
gacgaagaagactaa
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