Xiphophorus maculatus (southern platyfish): 102229677
Help
Entry
102229677 CDS
T02923
Name
(RefSeq) mucolipin-1 isoform X4
KO
K04992
mucolipin 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04020
Calcium signaling pathway
xma04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102229677
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
102229677
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102229677
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102229677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCLN_ECD
PKD_channel
Ion_trans
Motif
Other DBs
NCBI-GeneID:
102229677
NCBI-ProteinID:
XP_005802881
Ensembl:
ENSXMAG00000008877
LinkDB
All DBs
Position
16:complement(21495678..21506150)
Genome browser
AA seq
567 aa
AA seq
DB search
MASSGYTCVPDSPAEKRRLLSSKSGYGSQDVLGCTGLADPQFRGQPRDEDEEEEALRRKL
KYFFMSPCDKYHAKGRKPFKLGLQLLKIIIVTVQLVLFGLSNQMVVTFKEENTAAFKHLF
LKGYQDNRPQAVHTQSELYSRIGFVVEQYMALPQIALGRYAYVKGVGVDGSALSLCQRYF
KTGAIDPVNDTFDIDPHVVTDCVGLDPTADSPVTRNGDYKNFTLQFYKLINVTVDFQLKA
INIQTIINNEIPDCYTFAITIAFDNKAHSGQIKILLQNQASIKECKDTNVSGHAESYARE
FFDVVVATVCLLSLLLCGRSILRGILLQREYVQFFKHKLERKVSWGDRMEFINGWYILLV
ISDVFTIVGSFIKIGIESKTLSSYDVCGILLGTSTLLVWVGVIRYFSFFQKYNILIVTLR
AAFPNVIRFCCCVAVIYLGYCFCGWIVLGPYHAKFRSLSMVSECLFSLINGDDMFVTFAE
MEQSGTLVWVFSQVYLYTFISLFIYMVLSLFIALITGAYDTIMAQTKEQVPETDLHAFIA
QCTDTPSSGKFRGPDGSSCSFLCCCEW
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcgggctacacctgcgtcccggacagccccgcagaaaagcggagactgttg
tcctccaagtccggctacggatcccaggatgtgctcggatgcactggcctggcggacccc
cagttccgcgggcagccacgggatgaagacgaggaggaagaggctctgaggaggaaactc
aagtacttcttcatgagtccttgtgacaagtaccacgccaaggggcgcaagcctttcaaa
ctggggctgcagctgctaaagatcatcatcgtgacagtgcagttggtgctgttcggtctg
agcaaccagatggtcgtgacgttcaaggaggaaaacacggcggcattcaagcacctgttc
ctgaagggttaccaggacaaccgtccccaggctgtccacactcagtcggagctgtacagc
cgcatcggcttcgtcgtagagcagtacatggctctaccgcagatcgcactgggccggtat
gcatacgtgaagggcgtgggcgtggacgggagcgctctctccctctgccagaggtacttc
aagacgggcgccatcgatcccgtcaacgacacgtttgacatcgacccccacgtcgttaca
gattgcgtcggcctcgatccgaccgctgacagccctgtgacgagaaacggcgactacaag
aatttcaccctccagttttacaagctgatcaatgtcacggttgatttccagctgaaggcc
atcaacattcagaccataatcaataacgaaatccccgactgctacaccttcgccatcacg
atcgccttcgacaacaaagctcacagcggccaaatcaagatcctcctccagaaccaggcc
tccataaaggagtgcaaagacacaaacgtgtccggacacgcggagagctacgccagagag
ttcttcgacgtggtggtggcgaccgtctgcctgctgtcgctactgctctgcggccgctcc
atcctcagaggaatcctccttcaacgcgaatacgttcagtttttcaagcacaaactggag
cgcaaggtgagctggggggacaggatggagttcatcaacggctggtacatcctgctcgtc
atcagcgacgtgtttaccatcgtcggcagcttcatcaagatcgggatagagtccaagacg
ctgtcgtcgtacgacgtgtgcgggatcctgctgggaacgtccactctgctggtgtgggtg
ggagtcatccgctacttcagcttcttccagaaatacaatatcctgattgtgactctgaga
gctgcttttccgaacgtcatccgcttctgctgctgtgtggctgtgatttatttgggatac
tgcttctgtggatggattgtcctgggcccctaccatgccaagtttcgctccctgtccatg
gtgtcagagtgcctgttctccctcatcaacggggacgacatgtttgtgacgtttgccgag
atggagcagagcggcaccctggtgtgggtcttcagccaggtctacctctacaccttcatc
tccctgttcatctacatggtgctgtccctcttcattgcgctcatcaccggcgcctacgac
accatcatggcccaaacgaaggagcaggttccggagacggacctgcacgcgttcatcgcg
cagtgcacagacacgcccagttccggcaagttccgcgggccggacgggtcgtcgtgctcc
ttcctctgctgctgcgaatggtga
DBGET
integrated database retrieval system
