Xiphophorus maculatus (southern platyfish): 102229683
Help
Entry
102229683 CDS
T02923
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03030
DNA replication
xma03410
Base excision repair
xma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102229683 (pole)
03410 Base excision repair
102229683 (pole)
03420 Nucleotide excision repair
102229683 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xma03032
]
102229683 (pole)
03400 DNA repair and recombination proteins [BR:
xma03400
]
102229683 (pole)
Enzymes [BR:
xma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102229683 (pole)
DNA replication proteins [BR:
xma03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
102229683 (pole)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
102229683 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Sigma70_ner
APP_N
Motif
Other DBs
NCBI-GeneID:
102229683
NCBI-ProteinID:
XP_023199951
Ensembl:
ENSXMAG00000007745
LinkDB
All DBs
Position
12:18478105..18496149
Genome browser
AA seq
2294 aa
AA seq
DB search
MVLQNSGRYKSDRGQSGANQENQDDGSSMSALKRLERSQFTDDMDARFGFDRMKEPGEKT
GWLINMHPTEILDEDKRMISAVDYYFIQEDGSRFKVALPFKPYFYIDTKKNCEREVISYL
SKKFQGKVAKLEILPKEDLDLPNHLVGLKRSYIKLSFNTVDDLVKVKREISPAVRKNRER
EQSNDAYTSMLSSALSGGSVISADEDGTLKSIADQLDNIVDMREYDVPYHVRVSIDLKIH
VAHWYNVRYRGSAFPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGFLITNREIVSENIEDFEFTPKPEYDGPFTVFNEDDEAALIQRWFDHVQETKPNIF
VTYNGDFFDWPFVETRAALHGLSMHREIGFQKDNQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQIFNKLTDDGHVLDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAVEEEEKIPLEQVTNFNEV
CVEIKKKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCASCDFNKP
GATCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHTLNREEQAKHE
KKRLADYCKKAYKKTHVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
STAQDNGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNDKKPKVTISYPGAMLNI
LVKEGFTNDQYHELVDPTALTYNTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYSSVAKVADYWLDVLYS
KAANMPDAELFDLISENRSMSKKLEEYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRTILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQIAHQP
LEAGQAADMEDFGAAPRPLQPAILISTKRKRASQGEDSQVESQDVELTQSWREILGPPPP
TGKTREERLVWLRYHKKKWELQLRQRKEKKKRRKLLDGEPQPVGGGVIRGGPSTGLGNFL
RRTARSILDMPWQIVQIAETNHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQDEGG
VAYRKVNRMLPRSNIVYYLYEYSVPEDMYQNHINEINADLSAPDIEGVYETQVPLLFRAL
VQLGCVCMVNKHIVRDLAGRETDSFDLEHLDMRSLAQFSYLEPGSVRHMYLYHHSQGQKA
LFGLFIPSQRKASVFILDTVRSNQMPNLSNVYTAERTALLEKTSEELLPPEKHTFEVRAE
NDIKAVSRALQRILLNYKDERRGPTLIAVQSNWELQRLAAGMPVLEEFPVVPVHVVDEIN
YNVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLR
KHNHLLWLSPTARPDLGGKEADDSRLVMENDEKGSVEINSQGCYSTACVELDLQSLAVNT
ILQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSM
VVGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKR
LGSTVVYGNFNRIILCTKKRRIDDAIAYVEYITKSIHSREIFHSLSISFSRCWEFLLWMD
PSNYGGVKGKLPSSILYGEEGAKQKKRKQGEEDEEGSEDEDEDDAEEDDGDAETDEVEEL
IESNWNVMHYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPVKRRAGSQASQ
QAVGDLSALPGMISFSQEYVASELTQNIFTITQKIQKKVTGTRNVTQTSEMFPVLPGSHL
PLNNPALEFVKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEEAQFRDPCNSYILPE
VICHHCNFCRDLDLCKDPTVAQDGSVLPQWFCSNCQMQYETESIETALVDALQKKLMSYT
LQDLVCTKCKGVKEANMPLYCACAGNFDLTFSAKSFSEQTAVFRNIASHYNMRFLGETID
WLLEMSPQIGQSRH
NT seq
6885 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcagaacagcggacgatacaaatcggacaggggccaaagtggagcaaaccaa
gaaaaccaggatgatggatcctccatgtcggcgctcaagcggctggagcgcagccagttc
accgacgacatggacgcccgcttcggcttcgacaggatgaaggagcccggggagaaaacg
ggctggctgatcaacatgcaccctactgagattctggatgaagacaaaaggatgatcagt
gccgtggactattattttatccaggaggacgggagcagattcaaggtggctcttcccttc
aagccttacttctacatagatactaaaaagaactgtgagagagaggtcatctcatatttg
tcgaagaagttccaaggaaaagtggcgaaacttgaaattctcccaaaggaggacttggac
ctgccaaaccatctagttggactgaagagaagctacatcaagctgtcattcaacacagtg
gacgatctagtcaaagtcaagcgtgagatttctccagccgtacgcaagaacagagagagg
gagcagtccaacgacgcctacacatcaatgttgtcaagtgctctgtcaggaggcagcgtg
atctcagccgatgaggacgggacgttgaagagtatcgccgatcagctggacaatatcgtg
gacatgagagagtacgatgtcccttatcacgtccgagtgtccatcgacctcaagattcat
gtggctcactggtacaacgtccgataccgaggcagcgccttcccgccagagattgtgcga
cgagacgatctggtcgagcgcccggacccagttgttctggcatttgacatcgaaaccacc
aaacttcctctgaaattcccagacgcagagacggatcagattatgatgatctcctacatg
atcgacggacagggctttctaatcacgaatagagagattgtctccgagaacatcgaggat
tttgagttcacccccaagccagaatatgatggacctttcacagtttttaacgaggatgac
gaggctgctctcatccagaggtggtttgatcacgttcaagaaacaaagccgaacatcttt
gtcacctacaacggagacttttttgactggccttttgttgagactcgcgcggcgctccat
ggactgagcatgcacagggaaatcggtttccagaaggacaaccagggagagtataaatcc
agtcaggccatccacatggactgcctcaggtgggtaaaaagggacagctacttgcctgtg
ggaagtcacaacctgaaggcagcagccaaggctaaactgggctatgacccggtggagctg
gacccagaggagatgtgccgaatggccactgaggaacctcagaccttagcaacctactct
gtgtcagacgctgtggccacatactacctctacatgaaatatgttcaccccttcatcttc
gccctgtgcaccatcatccctatggagcctgatgaggtgctgcgtaaaggttcaggcacc
ctgtgcgaagccttgctcatggtgcaggccttccacgccaacatcgtcttccctaacaag
caggaacagatctttaacaagctgacagacgacggccacgttctggactctgagacttac
gtgggaggccacgtggaggcgctggagtctggagttttccgcagcgacatcccctgccgc
ttcaagatgaacccggctgccttcgactttctgcttcaaagagtcgagaggacgatgcgt
cacgccgtcgaagaggaagaaaagattcctctggagcaagttaccaactttaacgaggtt
tgtgttgaaatcaaaaagaagctaacctccttgaaggatgtcccaaacaggatcgaatgc
cccctcatctaccatctggacgtcggggccatgtaccccaatattattctcacaaaccgt
ctgcagccatcagctatggttgatgaggccacatgtgcttcctgtgactttaacaaacct
ggggccacctgccagaggaggatggcctggcagtggagaggagaaatcatgcctgcaagc
cgcagtgagtttcaccgcatccagcagcagctggagtcggagaagttcccacctctcttc
cccaacggccctcctcgggcgttccacactttgaaccgggaggagcaggccaaacacgag
aagaaacggctggcagattattgcaagaaggcctacaagaagactcacgtcacgcggctt
gaggagcgagttaccaccatatgtcagagagaaaactccttctacgtcgacacagtcaga
gctttcagggatcgccgttatgaattcaaaggacttcacaaagtgtggaagaagaagctg
tcaacagctcaggacaatggagatgctgctgaggtgaagcgctgcaaaaacatggagatc
ctgtacgagtctcttcaactggcccataaatgtattcttaactctttctacggctacgtc
atgagaaaaggggcgcgctggtactccatggagatggctggcatcgtgtgcttcactgga
gccaacatcataactcaggccagagaacttatcgaacaaatagggaggcctctggagctg
gacactgacggaatctggtgtgtcctccccaacaccttccctgagaactttgtggtaaaa
accagcaatgataaaaaacctaaagtgaccatctcttacccgggggccatgctcaacatc
ctggtgaaggagggattcaccaatgatcagtaccacgagctggtcgacccaacggcgctc
acttacaacacccggtcagagaacagcatcttcttcgaggtggacggaccgtatctggca
atgattctgcccgcctccaaagaggaagggaagaagctgaagaagaggtatgccgtgttt
aacgaggacggctcattagctgagctcaaaggctttgaagtgaagaggagaggagagctt
cagctcattaagatttttcagtcctctgtgtttgaggcattcctcaaagggactactctg
gaggaggtctattcttcagtggccaaggtggccgactactggctggacgtgctttacagc
aaggctgccaacatgccggatgcagagctgttcgacctgatctcagagaaccgctcgatg
tccaagaagctggaggagtacggcgagcagaagtccacgtccatcagcacggccaagagg
ctggccgagttcctgggagaccagatggtgaaagatgctggtctgagctgtcgctacgtc
atctctcggaaaccagaaggttccccagtcacagaaagggccattcctctggccatcttc
caggctgagcccagcgtgaagaaacatttcctccggaagtggctgaagatgcccagcctg
catgacttggacatccgcactatcctcgattggagctattacatcgagagattgggtagt
gcaatccaaaaaattatcaccatccctgcagcgctgcagcaagtgaagaatccagttccc
agagtgaggcatcctgactggctccacaagaaactcctggagaaaaacgacatctacaag
caaaagaaaatcagcgaactgttcaccagtgagggcaagagacagattgcccatcagccc
ctggaggctggccaagctgcagacatggaggactttggggcggcacctcgacccctgcag
cccgctatcctcatcagcaccaagagaaagcgggcttcgcaaggagaggacagccaggtg
gagtcccaagatgtggagctcacacagtcctggagggaaatcctgggacctccacctcca
acgggaaaaacacgggaggagcgactggtgtggctgcgctatcacaagaaaaagtgggaa
ctgcagctgaggcaaaggaaggagaagaagaagagaaggaagctgctggatggagaacca
caaccggtcggaggaggagtcattagaggtggccccagcaccgggctgggaaacttcctg
cggcggacagcgcgcagcatcctcgacatgccgtggcagattgtgcagattgcagagacc
aaccaccctggtctgtataagctgtgggcagtgattggaaacgatcttcactgcatgaag
ctcaacatccctcgcgtcttctacgtcaaccagaaagtcccaaaacaggacgaaggagga
gtcgcgtacaggaaggtgaaccgcatgctgcctcgctccaacattgtgtactacctgtat
gagtactcagtgccagaggacatgtatcagaaccacatcaatgagatcaacgctgacctc
tctgcaccggacattgaaggagtctacgaaacacaggtccccctgctgttccgtgcgctg
gtgcaactgggatgtgtgtgtatggtaaacaagcacattgtgagggatctggctggcagg
gagactgactccttcgatctggagcatctggatatgagatctctggcccagttcagctac
ctggaacctggaagcgttcgccacatgtacctgtaccatcacagtcaaggccagaaggct
ctgtttggcctcttcatcccctctcagcgcaaagccagcgttttcatcctggacacagtc
agaagtaaccagatgcccaacttgagtaatgtctacacagcagagcgcaccgccctcctg
gagaagacgtcagaggagcttctgcctccagaaaaacacaccttcgaggttcgagctgaa
aatgacatcaaggctgtatcccgagctttgcagcgcatcttgctgaactacaaggacgag
cgacggggacccaccctcattgctgtgcagtctaactgggaactgcagcgactggcagca
gggatgcctgtgcttgaggagttcccagtggttccagtacacgttgtggacgagatcaac
tacaatgtgctggactggcagcggcacggagcccggcgcatgatccgccattacctcaac
ctggacagctgcctgtcgcaagcttttgacatggccagatattaccaccttcctgtgggg
aacctgcctcaggatgtgtcaatcttcggctcagacttgttcctagccagacatctgcgg
aaacacaaccacctgctgtggctttctcccacagcgagaccagacctaggaggaaaagag
gctgacgacagtcgtttggtcatggaaaacgatgagaagggttctgtggagataaactct
cagggatgttactctacagcatgtgtggagttggacctccagagcctggcggtgaacaca
atcctccagtcgcagcatgttaacgacatggaggggggagccagtctgggcgtcagtttt
gatgtgatccagcaggcctcactggaggacatgatgtcaggaaaccagggcgccagcgct
cttgctagctatgacgagacggcgctctgctccaacaccttcaggatcttaaagagcatg
gtggtcgggtgggtgagggagatcacacagtaccacaacgtgtatgcagacaaccaggtg
atgcatttctaccgctggctgcgctctccgagttcgctgctctatgacccggcgctgcat
cgcaccctgcacaacatgatgaagaaggtgtttctgcaactggttgcagagttcaaacgt
ctggggtcaactgtggtgtacgggaacttcaacaggatcatcttgtgcacaaagaaacga
aggatagacgatgctattgcctatgtggaatatatcaccaaaagcatacattcgagagaa
atcttccactctctgtccatctccttctcacgttgttgggaattcctgttgtggatggac
ccgtctaactatggcggtgtgaagggaaaactgccttccagcatcttgtatggagaggaa
ggagccaaacagaagaaaagaaaacaaggagaggaagatgaggagggcagtgaagatgaa
gatgaggatgatgctgaggaagatgatggcgatgcagagactgatgaggttgaagagctg
attgagagcaactggaatgtcatgcattatctcccccaaacagcctcctgtcagaaatac
ttcctcatgattgtgtctgcctacatagctgcagtttaccacagcatgaaagaggagctg
agacgtaatgctcctggagcaacgccagtcaagaggcgcgcaggcagccaggcttcccag
caggcggtcggggacttgagtgcgcttcctggaatgatctccttctcccaggagtatgtg
gccagcgagctgacgcagaacattttcaccatcacccagaagatccagaaaaaggtgact
gggaccaggaatgtaactcagacctcagagatgtttcctgtcctgcccggctcacacctg
ccgctcaacaatccggcgctggagttcgtcaaatacgtctgtcaggtcctttcgcttgat
gccaacatcgtgaatcaggtgaacaaactaaagagagacctcctgcgtctcgtggatgtc
ggagagttttcggaggaggcccagtttcgtgacccctgtaactcctacatactgccagaa
gtcatctgtcaccactgcaacttctgtcgggacctcgacctctgcaaggacccgactgtg
gcacaggatgggtcggtcttacctcaatggttctgctcaaattgccaaatgcaatatgaa
actgagtctattgagacggccctggttgatgctctgcagaagaaacttatgagctacact
ctgcaggatctggtttgcaccaaatgcaaaggggtgaaagaagccaacatgcccctttac
tgtgcgtgtgccggaaactttgacctgaccttctcagccaagagcttctccgagcagacc
gcagtgtttcgaaacatagcttcccactacaacatgagattcctgggggagaccatcgac
tggctgcttgagatgagccctcagatcggccagagcaggcactga
DBGET
integrated database retrieval system
