KEGG   Xiphophorus maculatus (southern platyfish): 102229932
Entry
102229932         CDS       T02923                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03013  Nucleocytoplasmic transport
xma03015  mRNA surveillance pathway
xma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102229932 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    102229932 (rbm8a)
   03015 mRNA surveillance pathway
    102229932 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xma03019]
    102229932 (rbm8a)
   03041 Spliceosome [BR:xma03041]
    102229932 (rbm8a)
Messenger RNA biogenesis [BR:xma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102229932 (rbm8a)
Spliceosome [BR:xma03041]
 Complex C
  Other components
   EJC/TREX
    102229932 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 102229932
NCBI-ProteinID: XP_005801874
Ensembl: ENSXMAG00000013463
UniProt: M4AGA0
LinkDB
Position
3:11697984..11701218
AA seq 175 aa
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGLEEGSRSRAKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQTISVDWAFVRGPPKNKRRGGGRRRSRSPDRRRR
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcggacgtgttagatcttcatgaggcgggaggcgaagactttcctatggatgaggat
ggtgatgagagcatccacaagctgaaagagaaggccaagaagagaaaaggacgaggcttc
ggcttggaggagggatccaggtccagagctaaagaggactatgacactgtggagcaagat
ggggatgaaccaggtcctcagagatcggtggagggctggatcctgtttgtgactggtgtg
catgaggaggcaacagaggaggacatccatgacaagttttcagagtttggagaaattaag
aacctgcatcttaaccttgatcgaagaacaggttacctgaagggctacgcactagtggag
tatgagacgtacaaagaagcgcaggcagccatggagggcctcaatggtcaggacatgatg
ggccagacgatcagtgtagactgggcgtttgtcagaggacccccgaagaacaagaggagg
ggaggtggacggagacgcagcagaagtccagaccggagacgacgttga

DBGET integrated database retrieval system