Xiphophorus maculatus (southern platyfish): 102229981
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Entry
102229981 CDS
T02923
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
102229981
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xma02000
]
102229981
Transporters [BR:
xma02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102229981
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Motif
Pfam:
SNF
UL148
Motif
Other DBs
NCBI-GeneID:
102229981
NCBI-ProteinID:
XP_023181092
Ensembl:
ENSXMAG00000011499
UniProt:
M4AAM6
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Position
20:17453638..17478208
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AA seq
608 aa
AA seq
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MEGEFVKANSVDGSNQGSVSGKKTPLLDRGQWASKLEFLLAVAGTLVGLGNLWRFPYLCY
KNGGGAFLIPYILFLLACGIPMFLLETAMGQYTSQGCITCWRQFCPLFEGIGYATQVVIA
YAAVSYIVIQAWAFFYLFSSFSAELPWASCRNSWNTESCVEFDMKNMSSNWTAAANATTP
ATEFWERRVLGISQGIEEIGSLRWELVLCLLLAWIICYFCVWKGVRSTGKVVYFTATFPY
VMLVVLLARGLSLPGAMDGLAFYLYPDPTRLVDPQVWMDAGAQVLFSFGICQGSLTALGS
YNQYKNDCYKDTFVLCLVNGGSSFVAGFAIFSVLGFMSYEQGLPISQVAASGPGLAFIAY
PRAVAMMPLPQLWAVCFFVMVILLGADTQFVSLECLMTSVTDMFPSVFRRAYRRELLLLC
LCAVCFFLGLLLVTEGGLYFLQLFDHYVCSGNNLLLLSVCQSIAIGWIYGADRLYDNIED
MIGYRPWPLMKICWLYVTPTVCLGTFIFSVVRYKPLKFNKTYIYPTWAYALGWFLGLFCV
LLVPLWILFKLTQMEGTLLEKLQKLCRPEKMNSNTKQPERYPLNPDSGLTPGVSGYKGSY
ASEMEMQV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggagggagagtttgtgaaagcaaacagcgtggacgggtccaaccaggggagcgtctcc
ggaaagaagaccccgctgctggaccgcggccagtgggcgagcaagctggagttcctactg
gccgtagcgggaacgctggttggactgggaaacctgtggaggttcccctacttatgctac
aaaaacggaggaggtgcatttctgattccctacatcctgtttctgcttgcttgtggcatc
ccgatgttcctcctggagacagccatggggcaatacacatcccagggctgcatcacctgc
tggaggcaattctgtcccctgtttgaaggtatcgggtacgccacgcaggtagtgattgca
tacgctgctgtgtcgtacattgtcatccaggcgtgggctttcttctaccttttctcatcc
ttcagcgctgagcttccatgggccagctgcagaaactcctggaacacagagtcttgtgtt
gaatttgatatgaaaaacatgtcatccaactggacagcagctgcaaatgcaacaacacct
gcaaccgagttctgggagagaagagttctgggcatttctcaggggattgaggaaattggt
agcttaagatgggagttggtcttgtgcctgttactcgcttggattatctgctacttttgt
gtttggaaaggagtgcgatccactggaaaggtagtttactttactgccacgtttccctat
gtgatgttagtcgttctgttggcccgtgggctctcgttgcccggagcgatggatggcttg
gctttctacttatatccagatcctacaaggttggtggaccctcaagtttggatggatgca
ggtgcacaggtccttttctcttttggcatttgtcaggggagtttgacagctctgggaagc
tacaatcagtataaaaatgattgttacaaggacacatttgttctgtgtctggtgaacggc
ggctccagtttcgtggcggggtttgccatcttttctgttttgggatttatgtcatatgaa
caaggactgccaatatcccaggtggctgcttctggacccggcttggcattcattgcctat
cctcgtgctgtagccatgatgcctttgcctcagctgtgggctgtttgcttcttcgtcatg
gtcatcttgttgggtgcagacacacagtttgtgagcctggagtgcctgatgacctcagtg
acagatatgttcccctctgtgtttcgaagagcttatcgcagagaactgctgctgctttgt
ctctgcgctgtttgcttctttctcggcctccttctcgtcacagaggggggcttatatttc
ctccaactctttgatcattatgtttgcagcggtaataatcttctcctactttcagtgtgt
caatccatagcaattggatggatatatggtgcagatcgtctctatgataacattgaagac
atgattggttaccgtccatggcctctgatgaagatttgctggctttacgtaacacctact
gtgtgtctgggtacctttatcttttctgtggtgagatacaagcctctgaagttcaataaa
acctacatctaccctacctgggcctatgctttgggttggttcctcggactcttctgcgtt
ctcctggttccactgtggatcctgtttaagctcactcagatggagggaacgcttttggag
aaactccagaagctttgccgtcctgaaaagatgaacagcaacacaaagcaacctgagcgg
taccctttgaacccggacagcggtcttacacctggggttagtggatacaagggaagttat
gcttctgagatggagatgcaagtgtga
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