Xiphophorus maculatus (southern platyfish): 102230003
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Entry
102230003 CDS
T02923
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102230003
Cell adhesion molecules [BR:
xma04515
]
Cadherins
Protocadherins
102230003
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
102230003
NCBI-ProteinID:
XP_005799386
Ensembl:
ENSXMAG00000004547
UniProt:
M3ZQQ6
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Position
7:14930987..14949331
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AA seq
1091 aa
AA seq
DB search
MRLSAPVFLLLWVKALTLKNLNYSVPEEQGPGTVIGNIAKDGGYGTVERGKKSNFRVLEN
SAPHLADVDPESGLIFTKQRIDRETLCRRNPKCQLSMEVFANDKEICMIKIDIQDINDNS
PSFPSDHVNIDISENAAAGTRFPLTIAHDSDSGENGIKTYQVTRDDYNTFSLDLKVRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFEKSSYV
LEIPENSPPGKILIDLNATDQDEGSNGQVVYSFTGYASERIQDLFSIDPNTGVIKVQGEI
DFEENPIIEFDVQAKDLGPNPIPGHCKITVKVLDKNDNLPIISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDRETKDEYNVTIVA
RDNGNPSLNNTRSFTVKILDENDNAPRFTKTLYLLQVPENNIPGEYLGSVVAHDPDVGRN
GTVSYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKSFEFKVQAKDSGSPHMES
TSTVRVNVLDVNDNLPVIILPLLQNDTAEIPVPRNVGIGYIIATVKAVDHDHGESGHLTY
EITEGNDDHLFEIDPVGGEVRTAHALWEEIAPVVELVVRVTDHGKPPLSAVAKLIIKANT
ETTTGGGSSASGEQQHWDVSLPLIVTLCIISVMLLAVMTAIAVKSKHQDKDAGNYNCRMA
EYSNPPVGKGKKKRINKSDIMLVQSEMEERDSASRMNVVSSPSLITSPICFDYQSPLPLT
LPRSEVMYLKTTPNSLTVPRSGCHSSFAGLNTETQANRMSVIQTENFSSEPNYSGSRQPF
VQSSTFKDAERASLRDSGHGDSDQADSDQDTNKGSHCDTSAREALKMKAAAVNGQPFEKE
QDKSVHCTDECRALGHSDRCWMPKLRVGSQADSADNRTNLFIPVGMDAMVETEIYGTISC
SSRKTLTTFGKEQRDSTILVANVKPYLKSQRALSPPLQESPSASSSPTKSGAPPDLASRE
PNEERDGGSDISAYGPPDGQCSPLHTELEEPSYLTCELRPKSLSSCLIHSSVISQEYGGS
DCAPDQRDSGN
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctctgcacccgttttccttttgctgtgggtgaaagcactcacgttaaaaaac
ctcaattattccgtcccggaggagcagggacctggaactgttataggcaatatagcaaaa
gacggcggatatgggactgtagagagagggaagaaatccaacttcagggtgctggagaat
tcagccccgcatctggcggatgttgaccccgagagtggactaatcttcaccaaacaaagg
attgacagagagacgctatgtaggcgcaaccccaagtgccagctctctatggaggtgttc
gccaatgacaaggaaatttgcatgatcaagattgatatacaggacatcaatgacaactcc
cccagtttcccttcagatcatgtgaatattgatatctctgagaatgcagctgctgggaca
cgcttccccctcactattgcacatgactcagattctggggaaaatgggataaagacctat
caggttacaagagatgactacaataccttttctttggatttaaaagtgaggggtgatggg
actatatacccagaactggtggttcagagacccctcgatagggaggatcagagtcatcac
actcttcttcttactgcaatcgatggtggggagtatccgagatcgggctccatgcaaatc
aacgtcagagtgactgattcaaatgacaatagccctgtttttgaaaaatcttcctatgtg
ctagagattcctgagaattctccccctggaaaaatacttatagatctgaacgccactgac
caggatgagggaagcaacgggcaggtggtctattccttcactggatatgcatctgagcga
atacaagatttgttctcaatagacccaaacactggcgtcattaaggtccagggagagatt
gactttgaggagaatccaatcatagagtttgatgtgcaggcaaaggatctggggcccaat
ccgataccaggacattgtaaaattactgtgaaagtacttgacaaaaatgataacctgcca
ataataagttttgtctctgttcggcagggagcaatcagtgaagcagctcctccagagtct
gtcatagcactggtcagagtgactgataaagactcagggcgtaatggccagctccagtgc
cgggttctgggaaatgtccccttcagacttcaggaaaacaatgataatttctacactctc
cttacagacagacctctggacagagaaacgaaagatgaatataatgtcacaattgttgca
agagacaacgggaacccatctttgaacaacaccaggtcattcactgtgaaaatcttagat
gagaacgacaatgcgccacgcttcacaaagacactctacttgctgcaggtgcctgagaac
aacatcccgggagagtacttgggctctgtcgtggcacatgatccagatgtaggtcgtaat
ggaactgtttcatactccatactgccatcccacattggagatgtatcagtctacacatac
gtgtctgttaatcccacaaacggagcaatctatgcctctcgctccttcaactatgagcag
acaaaatcctttgagttcaaggttcaagcaaaagacagcggctctcctcacatggagagc
acttctacagtcagggtcaatgtccttgatgtgaatgacaatcttccagttattatttta
cccctgctgcagaatgatacggctgagattccagtacctagaaacgtgggaattgggtac
attattgctacagtaaaagcagtggaccatgaccatggagaaagtgggcacttaacctat
gagatcacagagggaaacgatgaccacctgtttgagatagacccagtgggaggagaggtc
agaactgcccatgctctctgggaggagattgccccagtggttgagctggtggtgagagta
actgaccatggcaaacctcccttatctgctgtggctaagctgatcattaaggcaaatacg
gaaactacgacaggagggggttccagcgcgagtggggaacagcagcactgggacgtgtcc
ctgcccctcatagttaccctctgcattatctctgtcatgctcctggccgtcatgactgcc
atcgctgtcaagtccaagcatcaagataaggatgctgggaattataactgccgcatggct
gaatactccaatcctccggtggggaagggaaaaaagaaaaggatcaacaagagtgacatc
atgttggtgcagagtgagatggaggagagggattctgcgagccggatgaatgttgtcagc
agcccatccttgatcacttcacccatatgcttcgactaccagagcccgctgccgctcaca
ctacccaggtcagaggtcatgtacctgaaaaccaccccaaacagcctcactgtgcccagg
tcggggtgccactccagttttgctgggctaaacacagaaactcaagcgaataggatgtca
gtgatacagactgaaaatttctcatcagagcccaattattctggcagcaggcagccattt
gttcaaagctcaacatttaaggatgcagaacgagcaagtctcagagacagtggccatggt
gatagtgaccaggctgatagtgaccaggatactaataaaggctcacactgcgacacatct
gccagggaggccctcaagatgaaagcggcagcagttaatggccagccttttgagaaggag
caagacaaatcagtccactgcaccgatgaatgtcgtgcactgggacactctgacagatgc
tggatgccaaagttacgggtaggaagccaagcagacagcgcagataatcgcaccaacctt
ttcatccctgtgggaatggatgccatggtagagacagagatttatggcaccatcagctgc
agcagcagaaaaaccctcaccacgtttggaaaagaacagcgggacagtacaatcctcgtg
gccaatgttaaaccttacttaaaatcgcagcgtgcgctaagcccaccactccaagagagt
ccatctgcgtccagcagccccaccaagagcggcgcgcccccggacttggccagccgagag
cccaacgaagagagggacgggggatcagacatcagtgcctatggccctccagatggccag
tgctccccgctgcacactgagctggaggagccctcctacctgacctgtgagctcaggcct
aagtctctgtcaagctgtctcattcacagctctgtcatcagtcaagagtatggggggtcg
gattgtgctcccgaccagagggactctggcaactga
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