Xiphophorus maculatus (southern platyfish): 102230016
Help
Entry
102230016 CDS
T02923
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xma01009
]
102230016 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102230016 (rpap2)
Enzymes [BR:
xma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
102230016 (rpap2)
Protein phosphatases and associated proteins [BR:
xma01009
]
HAD phosphatases
Fcp/Scp phosphatases
102230016 (rpap2)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
102230016 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
S-antigen
Motif
Other DBs
NCBI-GeneID:
102230016
NCBI-ProteinID:
XP_005802457
Ensembl:
ENSXMAG00000004104
LinkDB
All DBs
Position
6:complement(2876627..2887396)
Genome browser
AA seq
595 aa
AA seq
DB search
MGTSRGQSLNGEKTSSMETEERRRRGGSAKSSKKGGKCVKVRTAEEDARRREEVKERLRE
KLELERRALKVVERLLEDRVAEDFLIDCAKLITPANYKDTVEERFIAKLCGYPVCPNKLG
KIPNQRFKISTKTNRVYDITERKCFCSNFCYKASKHYELQISKTPLWLRQHESPPEVRLL
KKGDGGSSGEEVLLSERCLKEEDIEDPLAAPPQDPPGSERSAAGSDLSQSSDSEQEQDFV
SSVVPQRRKVQVSWADLPKHTDGDGKQSEQRHIDDPEEGGRAGGDDASPENRPVEEATAK
LNKCSVSERVHPNSDLLEAGSKQAPNLAALSITQVGMSQRGAAGLRDLLNTHTGEANPDT
VRLNLLACLKRTLKEWCTDDTLSFLYGADHSLGSPFSNVKETQKEELDEDDLEDDDVTEP
DAEEQDRGRSAAAPDYETLWKETERLQLRVTEFYRGTWILPEEEITPSKETESKDPVLPL
IDSQAQNLIQKRITVEKLSSCLRNIVGPVGLTMSDLSTDLNNLVRTFRFSNTNIIHKTPE
WTLIAVVLLHLLSFVSPVVRDALEVSASVQYLNSLMEELGLQQHDLLSLVELFKS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgtcacggggtcagagtttgaacggagagaaaacaagcagcatggagacagaa
gagaggaggaggagaggaggttctgctaaaagctccaaaaaaggtgggaaatgcgtcaaa
gtacggaccgctgaagaagacgcgaggaggagagaggaggtgaaggagaggctgagggag
aagctggagctggagaggagagccctgaaggtagtggagcgcctcctagaggacagggtg
gctgaagacttcctgattgactgtgccaagctcataactcctgctaactacaaagacact
gtggaggagagattcatcgccaaactctgtggttatcctgtatgtccaaacaaactgggc
aagatcccaaaccaacggtttaaaatatctaccaaaacaaaccgggtttatgacatcaca
gagcggaagtgtttttgcagcaacttctgctacaaagcttccaaacactatgagctgcag
atatcaaagacgcctctttggctccggcagcatgaaagtcccccagaggtgaggttgctg
aagaaaggagatggtgggagctctggtgaggaggtgctgctgtccgagaggtgcctcaaa
gaggaggacatcgaggaccccctggctgccccgcctcaggaccctcctggctctgagcgc
agcgccgcaggaagtgacctcagtcaaagcagcgacagcgaacaggagcaggactttgtc
tccagcgtggtcccccagcgccggaaagtccaggtgagctgggctgacctgcccaaacac
acagacggagacgggaagcagagcgagcagcgacatatcgacgacccagaggaggggggg
agagcaggaggagatgatgcgtctcctgagaacagacctgtggaggaggccacagcaaag
ctgaacaagtgtagcgtgtcagagagagtccatcccaactctgacctgctggaagctgga
agcaaacaggctccaaacctggcggctctcagcatcacccaggtggggatgagccagaga
ggagcagctgggctgcgggatctcctgaacacccacactggagaagccaatcctgacacg
gtgcggctcaatctgctggcgtgcctgaagaggactctaaaggagtggtgcacagacgac
acgctgagcttcctgtacggagccgaccattctcttggatccccattctccaacgtaaag
gaaacgcagaaagaggagctggacgaagatgacctcgaggacgacgacgtgacggagcca
gacgccgaagagcaggacagggggcggtcggctgcagctccggactacgagacgctgtgg
aaggaaactgagcggctgcagctcagagtcacagagttttacagagggacgtggattctg
cctgaggaggagataacgcccagcaaggagacagaatcaaaggatccagttttgccgctg
attgattcccaggctcagaacctcatccagaaacggattacagtggagaaactcagcagc
tgtctcaggaacatcgtaggtccggtgggcctcaccatgagtgacctctccacggacctg
aacaacctggtcaggactttcaggttcagcaacaccaacatcatccacaaaaccccagag
tggacgctgatagccgtggtgcttctgcatctgctgtccttcgtgtctccggtggtgcgg
gacgccctggaggtgtcggcatcagtgcagtatttgaactctctgatggaggagctcggc
ctgcagcagcacgaccttctcagcctggttgagctctttaaatcctga
DBGET
integrated database retrieval system
