Xiphophorus maculatus (southern platyfish): 102230047
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Entry
102230047 CDS
T02923
Symbol
rnf115
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102230047 (rnf115)
04121 Ubiquitin system [BR:
xma04121
]
102230047 (rnf115)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102230047 (rnf115)
Membrane trafficking [BR:
xma04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
102230047 (rnf115)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102230047 (rnf115)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-Nse
C1_2
zf-ANAPC11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
102230047
NCBI-ProteinID:
XP_005810331
Ensembl:
ENSXMAG00000016213
UniProt:
A0A3B5Q3A0
LinkDB
All DBs
Position
3:complement(18266433..18276376)
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AA seq
314 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVNPKLPEYICPRCDSGFIEEVTEDSSLLEGGANGLDDTAT
QFAELWHLLLLERPFTTDRDSPDSEHRLPGGRLMGFGDLGGLGGGSIGGSVPTGLGGSMG
GLLGSGDSWGQGRPPRLGSQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFANSGVPGSPPL
SWTGMLHSNPGDYAWGQGGLDAVITQLLGQLENTGPPPAEKEKISSLPTVSITQEQADCC
MECPVCKEDFAVGEPVRQLPCNHFFHSECIVPWLEMHDTCPVCRMGLNGEDSSSQPSESP
SLSTDPRTQERWSF
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggctgttcccccgcatcggtttttctgtcactgttgtaagggagag
gtaaaccccaaactcccggaatacatttgtccaagatgtgattcaggtttcatagaggaa
gtaacagaggactccagtctcctagagggcggcgctaatgggctagatgacacagccaca
caatttgcagagctatggcatcttttgttactggagcggccatttacaacagacagagac
agtcctgattccgagcaccggctccctggaggacgcctgatgggcttcggtgatctggga
gggctgggaggcggatcgatcgggggatctgtccccacaggtttgggaggatccatgggg
ggtctgctaggatccggggactcctgggggcaagggcgtccgcctcgtttaggcagccag
aggagatacaggtccagaggcagcagcaggccagatcgctcaccagcggttgaggggatc
gtacagcagtttctagctggactctttgccaactctggagttcccggctcacctcctctg
tcatggacagggatgctgcactctaacccgggcgattacgcatggggacagggagggtta
gacgctgtcataacgcagttactaggtcaactggagaacacaggccctcctccagcggag
aaagagaagatttcttccctcccgactgtcagtataactcaggaacaagcagactgctgt
atggaatgcccagtgtgcaaagaggactttgcagtaggagaaccagtcagacagctaccc
tgtaaccacttctttcactcagagtgtatagtaccatggctggaaatgcacgacacgtgt
ccagtgtgtcggatgggtttgaacggagaagacagcagcagccagccctcagagtccccc
tcgctctccacggacccccgcacacaggagagatggtctttttga
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integrated database retrieval system
