KEGG   Xiphophorus maculatus (southern platyfish): 102230121
Entry
102230121         CDS       T02923                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102230121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xma03041]
    102230121
Spliceosome [BR:xma03041]
 Complex A
  U2 snRNP components
   U2 related factors
    102230121
 Complex B
    102230121
SSDB
Motif
Pfam: Surp cwf21 CID RRM_1 CTK3 SET_assoc
Other DBs
NCBI-GeneID: 102230121
NCBI-ProteinID: XP_005802964
Ensembl: ENSXMAG00000012662
UniProt: M4AE10
LinkDB
Position
11:19614335..19625758
AA seq 868 aa
MADRKRKPAASIKPITKKEKVELKKKEEEKAAEVFEEFVASFETSEKSKVKTFVRGGIVN
ATKEEEESEIKKSKLYRPATKFVPVSQHSSPTSLSDSKKSAFKKKTEEKKKSNLELFKEE
LKLIQEEREERHKRKKNDSEAGGEGGGYGDLDVPLSGRSMLYDDLTAPVTTNLYINCISP
KMNEDLLCREFCKYGPLASVKIMWPRTDEERCRTSNRAFVAFMTRKDAERAMAALDGKVI
MGFEMKLGWGKPARIPPQPLYTPAGVRVAPPPPSGLPFNAQPRDRFRNDFTKPLGSSKAE
LDKTLSEAVVKVVIPTERNLLFLIHRMVEFVVREGPLFEAMIMNKEKNNPDYRFLFDNKS
QDHVYYRWKLFSILQGESPTKWRTAEFRLFRGGSLWRPPILNSYTERSDEGAAVEEAAPP
EEEVKKGQLRAEHRQRLETLVEELTPSREDIASAMLFCLDRADAAEEVVGHISESFCSLQ
VPLQKKISRLYLVSDILHNSCAKVAGASYYRKYFESKLPQIFEHLHAAHKNIQARLQAEQ
FKQKAMNCFRAWEDWAIYPQPYLIQLQNIFLGFAKAGEEETETPEEVSGEIDGAPLDRRL
IDGLPMGKTPVDDIDGCPMGWDPLDGVPVDDIDGVPLNAPIDDIDGVPLDESKLPLSRVP
LSKWEKIGDSAQTDSKWDTLGEQDDEKKAHISCNSQDEDEDSESDSSADSCRSPNYEGAV
FPHMSESKRKRLREVEVKVMKLQDELESGKRQKKSGMSIQQQVETYRKKLLQKEFHKDEE
KTERSKSKDGQREERRHKERSKKNEDGDRRLNSKLGEKLRKSRSISPSRTKSPKWSKRSR
SPSPDQKVSKSKSRSPHRSHKKAKKSKH
NT seq 2607 nt   +upstreamnt  +downstreamnt
atggcggacagaaaaagaaaaccagccgcctccatcaaaccgatcacaaaaaaagagaaa
gtagagctaaagaaaaaggaggaagagaaagctgctgaagtttttgaagaatttgttgca
tcttttgaaaccagtgaaaaaagcaaagtaaagacttttgtacgtgggggaattgtaaat
gcgactaaagaggaggaagaatcagagatcaagaaaagtaagctgtaccgacccgccaca
aagtttgtccctgtgtctcaacattcctcaccaacgtccttgtctgacagcaaaaagtct
gctttcaaaaagaagacagaagaaaagaagaagagcaatcttgaactttttaaagaggaa
cttaagctcattcaggaggaacgtgaggaaaggcataaaaggaagaaaaatgactctgag
gctggaggagaaggaggcggatacggagatctggacgttccattatcgggacgatcaatg
ctgtacgacgacctgacggccccggtcaccactaatctctacattaactgcattagcccc
aagatgaacgaagacctactctgcagagagttttgtaaatatggccccttggccagcgtg
aagatcatgtggccccgaacggacgaggagcgctgcaggacttcaaacagagcctttgtg
gctttcatgactcggaaagatgcagagagagccatggctgctctagacggtaaagtgatt
atgggctttgaaatgaagctcggatggggcaaaccagcccgtatcccgccgcagcctctg
tacacaccagctggggtgagggtggcacctcctcccccatctggtctccctttcaacgct
cagccccgggatcgcttccgcaacgacttcacaaagccgctgggctcgtccaaagcagag
ctggacaagactctgtccgaagccgtagtcaaagtggttatcccaaccgaaaggaatctg
ttattccttattcacaggatggtagagtttgtggtgcgtgaaggcccgttatttgaagcc
atgataatgaacaaagaaaaaaacaacccagattacaggtttctttttgacaacaaaagc
caagatcatgtgtattaccgttggaaactgttctctatcctccagggcgagtccccgaca
aagtggaggacagcagagtttcggctgttcagaggcggctccttatggcgaccccccatc
ctcaacagctacactgagaggagcgacgagggagcggcggtcgaggaggccgctcctccc
gaggaggaggtgaagaagggccagctcagagctgagcaccgacagagactggagactctt
gtggaggagctgactcccagcagggaggatatcgccagcgccatgttgttctgtctggac
cgggcagatgcagcagaggaagtcgtgggacacatttcagagtccttttgttcgcttcaa
gttccccttcagaagaagatttctagattatatctcgtgtcggacatcttgcacaactcg
tgcgctaaagtagccggggcgtcatattatcggaaatattttgaaagcaagctaccacag
atatttgagcatctacatgcagcacataaaaacattcaagccagactgcaggctgagcag
tttaagcaaaaggccatgaattgttttagagcatgggaagactgggccatatatccccag
ccttatctaatccagcttcagaacatctttttggggttcgccaaagcaggagaggaggag
acggagacgccggaggaggtatctggtgagattgacggtgcaccattggacagaaggctt
atagacgggcttccgatggggaaaactccggtggacgacatagacggctgccccatgggc
tgggaccccctggacggagtccccgttgatgacattgatggcgtacccctaaacgctcct
attgatgacattgatggagttcccttggatgaaagcaaacttccgctctccagagtgcct
ttgtctaaatgggagaagatcggtgatagtgcccaaactgactccaagtgggatacttta
ggggagcaggatgatgaaaagaaggctcatattagctgcaactcgcaggatgaagacgag
gactcagagagtgacagcagtgccgattcctgcaggtcgcccaactatgagggggcagtt
ttccctcatatgtctgagagtaaaagaaaaaggctgagggaggtggaagtaaaggttatg
aaactccaagatgagctggaatctggaaagaggcagaagaagtctggaatgagcatacag
caacaagtggagacctacaggaagaagctgctgcagaaggagtttcacaaagacgaagaa
aagactgagaggtcgaagtctaaagacgggcagagggaagaaaggagacacaaagagagg
agcaaaaaaaatgaggacggagacagaaggctgaacagtaaacttggagaaaagctgagg
aaatcaaggagcatctctccatcaagaacaaagtctcctaaatggtccaaacgttcccga
tcaccatctccagaccagaaggtcagcaaatccaagtcccggtccccgcaccgctcccac
aaaaaggcaaagaagagcaaacactaa

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