Xiphophorus maculatus (southern platyfish): 102230130
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Entry
102230130 CDS
T02923
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102230130
Membrane trafficking [BR:
xma04131
]
Protein recycling
Others
Others
102230130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Big_2
Motif
Other DBs
NCBI-GeneID:
102230130
NCBI-ProteinID:
XP_014326425
Ensembl:
ENSXMAG00000012795
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Position
22:complement(17129653..17198459)
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AA seq
1222 aa
AA seq
DB search
MMETRLGCCFFILFFSEWICLLSLTSILGGTKAEVRCIRQCQQPLVVEVPRERAAPDQAG
SDAAPGEEFVGFVEESFSASGEEKDGAAELVASEKSSFKLQPRPGENETSGLQGDGGHQK
LSHPPPSASGPSSINSSEERDNGFNSTGDADAVAWRVRRSAETWSGFRGEGVEDASVSDQ
EEFELTSSTFALAGDTAHNQAMVHWSGQNSSVILMLTKYYDFNSGRVTESSLWRSTDYGT
TYEKLNEKVGTKSILSYLYVSPNNKRKIMLLTDPEVESSLLISLDEGASYQKHSLGFDIL
SLLFHPEQEDWILAYSHDQKLYVSVEFGKRWQLVHDNVVPNRFYWSRLGLDKDQGMIHLE
ITISDGRSQYITCKLQNCSDGNKGKPFPGFIIPNSLVVQDEYVFIQVSVSGQAVHYVSYK
RHAFYPMKLPKYTLPKDLQIISTDENQVVAAIQDWHQNESYNLYMSDYRGLFFTLMLEDV
VSTGGPEDNVMIDLYEVAGIKGVFLSNKVVENQVKTYITYNKGRDWHLLQAPATDLQGNK
VYCEEPYCSLHLHLHVSENPYASGNIVSKDTAPGVIIASGVVGPELSSVNVSIFITSDAG
NTWREVFQEEYSVFFLNQGGSLVAIRHTPLPIRHIWLSFDEGRNWDKYSFTSSPLYVDGV
LGEPGEDILIMTIFGHFSHRSEWQLLKIDFRPIFEKRCTSEDYVTWQLHNEGEVCIMGMK
RIFQKLRANVRCVKARDQYISQMSDSCACTEADFECDYGFERQVDGSCTSAFWFVPSAST
RDCITGDSFFNTTGYRKALSNNCTEGSLLKYSPRQQKCPSQAPRGLQLFTSEGTFVATLG
RNVTFLVFLEEGLSLMTSMTVDFGDGTAISYVNISSIDDGVKHIYNKVGIYQVSATASNH
LGIDKVFLYLHVSCHLEQVQLSAPLVVIKDKAVNFTTTLRPSSVGTVTYFWWFDNKSEPV
VTLDGAITFTFSREGSHIVTVQALAGNIVHQDQIRVAVYDYFRSHPLVFSSNLDEMNPGV
LEWREDIGRVVKTCIVQVTGINEDQLLVKLFPGLPTTAEVFIVPERRSRDRGMNEEWAHL
DQLSQVLLSALNQDLIEFTIKPGLQVNVYATRLSPAPLVDGSDSGHSGTAVIMLVSVVLM
GLAVFVIYKFKRKIPGMNTYATEKPDKEQEVIPAVTSIAVPNPEGDELTSLDHVDIQLDS
KSRGYLPSHTDIKLSDEAPHVF
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacgcgtctcggttgctgcttttttatcctttttttctctgagtggatttgt
ctattatcattaacttccatcctgggcggaacaaaggcggaggtaaggtgcattcgccag
tgccagcagccgcttgtcgtagaggtaccccgggaaagagcggccccggaccaggcgggt
tccgacgcagctcccggtgaagaattcgtcggatttgttgaggagtcgttcagcgccagt
ggagaggaaaaagacggcgctgcggaattggtcgcgagtgaaaaaagttcattcaaacta
cagccgcggccgggggagaatgagacaagtggtctgcagggagacgggggccatcagaaa
ctttcccacccacctccaagcgcctccggcccctcttctattaactcgagtgaagagaga
gataacggcttcaactcgaccggggacgcagatgcggtcgcttggagagtgcgaaggagc
gcagagacctggtccggattccggggcgagggtgtggaggatgcttcggtttcggaccag
gaggagttcgagctcacaagttcaacatttgccctcgccggggacacagctcacaaccag
gcgatggtgcactggtccggacaaaacagcagcgtgatactcatgttgaccaaatactac
gacttcaactctggcagagtaacagagagttctttgtggaggtcaaccgattatgggacc
acgtatgaaaaacttaatgagaaagtggggaccaagagcatactgagctacctgtatgtg
agtccaaacaacaaaaggaagatcatgttgctaactgacccagaggtggagagcagcctg
ctcattagccttgacgagggggcgtcctatcagaaacacagcttaggctttgatattctc
agcttgcttttccacccggagcaagaagactggatcctggcttacagccatgaccaaaag
ctctatgtctccgttgagtttgggaagagatggcagcttgtgcacgacaacgtcgttccc
aacagattctactggtctagactgggtttggacaaagaccaagggatgattcacctcgag
atcaccatctcagatggacggtcgcagtacataacttgcaaacttcagaactgctcagat
ggaaacaagggcaaacctttccctggatttataatcccaaactccctggtcgtgcaggat
gaatacgttttcatccaggtgtcagtcagtggccaggctgtccattatgtgtcatataaa
agacatgccttttacccaatgaagcttcccaaatacaccctccctaaggacctgcagata
atcagcacagatgaaaaccaggtggtggcagcgattcaggactggcatcagaatgagtcg
tacaacctctacatgtctgactacagaggactgttcttcactctgatgctggaggatgtt
gttagcaccggtggtccagaggacaatgttatgatagacctctatgaggttgccgggatt
aaaggagtgttcctgtcaaataaagttgttgagaaccaagtgaaaacttatattacgtac
aacaagggcagagactggcatcttcttcaggctccagcaaccgatctccagggaaacaag
gtctattgtgaggaaccatactgctctttgcatcttcaccttcatgtctctgagaaccct
tacgcctcaggaaacattgtcagcaaagacacggctccaggggttataatagcatcaggt
gtggttggtccagaattaagcagtgtgaatgtcagtatcttcatcacatctgatgctgga
aatacctggagagaggtttttcaggaagagtacagcgtgtttttcctgaatcaaggagga
tctctagtggccatccgacatacacctctgccaattagacacatttggctgagttttgat
gagggcagaaactgggacaaatatagcttcacctcctctccactctatgtcgatggggtg
ctgggggagcctggagaggacatcctcataatgacgatatttggtcatttcagccatcga
tctgaatggcaacttctcaagattgacttccggcctatatttgaaaaacggtgcacatct
gaggactacgtgacatggcagttacacaatgagggggaagtgtgcatcatgggaatgaag
agaatcttccaaaaactgagagcaaacgttcgatgtgtcaaggccagagatcagtatatt
tctcagatgtcagactcctgcgcgtgcacagaggcagattttgagtgtgactatgggttt
gagaggcaagtcgatgggagctgcacttcagctttttggttcgttccttcagcatcaact
cgagactgcattacgggggacagcttcttcaacacaacaggatatcgcaaggctttgtcg
aacaactgcaccgagggaagtctgttgaagtacagccccaggcagcaaaagtgtcccagc
caggctcccaggggcctccagctcttcaccagcgagggaacatttgtagcaacgctggga
aggaatgttaccttcttggtctttctggaagagggtcttagcttgatgacaagtatgaca
gtggactttggtgatggaactgccatatcttacgttaatatcagctccatcgatgatggg
gtcaagcacatctacaataaagttggaatctatcaagtttcagccacagcaagtaaccat
ctcggcattgacaaggtcttcctctacctccacgtgtcctgtcacctcgagcaggtgcaa
ctttcagctcctttggtggtcattaaggacaaagcagtgaatttcacaacaacacttcgc
ccaagtagtgtgggaacagtcacatatttctggtggtttgataataagtcagagccagtt
gtgacccttgatggagcaatcaccttcactttctccagagagggaagtcacattgttact
gttcaggctttggccggtaatattgtccaccaggaccaaatcagagtggcagtttatgat
tatttcaggtcacatcctttggttttttcctctaatctggatgagatgaacccaggggta
ttggagtggagagaagacattggcagagttgtgaagacctgcatagttcaggtcacaggg
attaatgaggaccaactcctggtcaagctgtttccaggtttaccaactacagccgaggtc
ttcattgtaccagaaaggaggtcaagagacagaggcatgaatgaagagtgggcacacctg
gatcagctttctcaggttctgctgagtgctctaaaccaggatctcatcgagtttacaatc
aaacccgggctgcaggtgaatgtgtatgccacacggctgtctccagctcctcttgtggac
ggcagtgacagtgggcacagtggcactgcagtcatcatgctggtgtcagtggtgctgatg
ggattggctgtctttgtgatatataaatttaaaagaaagatcccaggcatgaacacgtac
gccacagagaagcctgacaaagaacaagaggtcatccctgcggtgacctccatagctgtc
ccaaaccctgagggggatgagctgacctcactggaccatgtggatatacaactggactca
aaaagcagaggctacctgccatctcacacagacatcaagctctctgatgaagcgccccat
gtgttttaa
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