Xiphophorus maculatus (southern platyfish): 102230132
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Entry
102230132 CDS
T02923
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102230132
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
102230132
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
102230132
NCBI-ProteinID:
XP_023188793
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Position
4:6860118..6937178
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AA seq
1435 aa
AA seq
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MDRLHSSMRKRLYSLPQHIGQKASIMGEGEDADKDTRRKSIRMKPLPSPTSGVSCKGIGE
TKSGESVIMETDMGRPLKTSSNGDCRRFRGSLSSITSRHVHDSDSAEARRLITEGDVTPS
EESPPGAIGDEQPDEGAQGASGGAQTDPPDQQAGFIKLDGIDQILPDDAGLYQAGFIHRQ
LGAMLQPGVNKFSLRMFGSEKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNL
IIIPVGITFFKDEHTPPWIVFNVVSDTFFLMDLVLNFRTGIVKEDNTEIILDPQQIKIKY
LRSWFVVDFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRY
IHQWEEIFHMTYDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPADCWVSKNKMV
NDTWGQQYSYALFKAMSHMLCIGYGMYPPVGMTDVWLTILSMIVGATCYAMFVGHATALI
QSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILGELNEPL
REEIINFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQH
GVVSVLTKGNKETKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYP
MMRRAFETVALDRLDRIGKKNSILQHKVQHDLSSGVLNYQENEIIQQIVQHDRDMAHCAH
LMQNAPPQTPPSPTPVIWAPLIQAPLQAAAATTSVAIALTHHPHLPPTLFRPPVSVLSSL
KDPSTRLRKFQPFVPSSTAPGSSGDSLSSTPSKLHSGVDMPLLAAFRAHHMTSGSGTVGS
TRQGSGLGGQRGNNGTGSVSSEGGTNVFPFGPHSSSVSPSSSMAQLHPQPQYQQPFRSST
PPLSNLFHQSPVGGSTGSGLSGGAIGACGGATGWSSGGTAGGSVEGASGGDSSWAGEDFT
TGIADITSRERFDLKGATEGSLHGNPGEILGAGSESSVGAACGQFTGTTSGASGLGVTCG
LMQDKTKRLLEETSRGSIERVSRGSMSGTSQESLLLTNPGGSFGKASDGSSASVFDIACG
GTFGGVSVEMSVGNSTALFGKSSTGSASSHTGGASNEPGETTTGGYTGRMTGCAVGTQVA
TFSTLPGLPSSGITTGLVGSSFCQSPLSTSPSNIMSSQILPNQPHPKSLQQFAGGGRTTS
GINLFQSPSQGSPSCVRGQQTQLPATGSPPSVSHFSLAGLQSGCLPHQMSLEKSALASLA
QYGSANASPCLTPVARSPTVQSPVAGRTFQYSDPSSIAGSHSSLLMPQSPLLSQLPSLPQ
ASGRDSPLAPFSEDLKSLSSSHPSLPQEVAQALSHQTTCSSVEYYPSPFSSPTLVPKPCS
SISGHMTPPKQESMGNPNLTQSPRSSPVPPPQRGSGAYLSDLEPQTARSKLPSNL
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttgcattcatccatgcgtaaaaggctctacagtttgccacagcacattgga
cagaaagcatccataatgggggaaggagaagacgcagacaaggacacccggaggaagagt
ataaggatgaagcctctcccgtcgccgacctctggggtaagctgcaaaggcatcggtgag
accaaaagtggggagtctgtgatcatggagacggacatggggagaccactgaagacgagc
tcaaatggggactgccggagatttcgaggcagcctctcgtccatcaccagtcggcatgta
cacgactcagactcggccgaggcgagacgcctcatcaccgagggggatgtcaccccgagc
gaggagagcccccctggggcgatcggcgacgagcagccggatgaaggagcgcagggtgcc
agcggtggcgcccaaaccgaccctccagaccagcaggcgggttttataaagttggatggc
attgatcaaattctaccggacgacgctggattatatcaagccgggttcatacacaggcag
ctgggagcgatgcttcaaccgggggtcaacaagttctccctgaggatgtttggaagtgag
aaagcggtcgaacgagaacaagagcgagtcaaatcggccggattttggataattcaccca
tacagcgacttcaggttttactgggacttaaccatgttgctgctaatggttggcaacctc
atcatcatccccgtgggcatcactttcttcaaagacgagcacaccccaccctggatcgtt
ttcaacgtggtctcagatacattcttcctcatggacctggtcctcaatttcaggacgggc
atagtcaaagaagacaacacagagatcatcctggatccccagcagatcaaaatcaagtac
ttgaggagctggtttgtggtagatttcatatcctccatccctgtggactacatttttcta
atagtggagacgcgcattgactcggatttctacaagacagcacgtgctttgcggattgta
cgctttacaaagatcctcagcttgctacgactcctacgactgtctcgactcattcgttac
atccaccagtgggaagagatcttccacatgacctatgacctggccagtgccatggtgcgg
atagtcaacctcattggtatgatgctgttgctgtgtcactgggatggctgcctgcagttc
ctggtgcccatgctgcaggacttcccagctgactgctgggtttccaaaaataagatggtg
aatgacacatggggacagcagtattcctatgcactcttcaaagctatgagccacatgtta
tgcattgggtacggcatgtatcccccagtgggcatgacagacgtctggctgaccatcctt
agcatgattgtgggcgctacttgttacgccatgtttgtggggcatgccactgcactcatc
caatcgctggactcatctcggcgtcaataccaggagaagtacaaacaggtcgagcagtac
atgtccttccacaagcttcctgcagatatgaggcagagaatccatgactactatgagcac
cgctaccagggcaagatgttcgatgaggagagcatcctgggggagctcaacgagccgctc
cgagaggaaatcatcaacttcaactgtcgaaagctagtagcttcgatgcctctgtttgct
aacgctgaccccaactttgtcacgtccatgctcaccaagttgaggtttgaggtattccag
cctggcgattacatcatcagagagggaactattgggaagaaaatgtacttcattcaacac
ggggtggtgagcgtcctcaccaaaggcaacaaagagaccaagctttcagacggctcctac
ttcggggagatttgtttgctgacacgaggcaggaggacagccagtgtacgagccgacaca
tactgtcgtttgtattctctctctgtggacaacttcaatgaggttcttgaagagtatcct
atgatgagaagagcctttgagactgttgccctggaccggctggaccgaattggaaagaaa
aactctattcttcaacacaaggtgcaacatgatctcagctctggggtactcaactaccaa
gaaaatgagattattcagcaaattgttcaacatgacagggacatggcccactgcgcccac
ctcatgcaaaacgctcccccacagacgcctccatcaccaacccctgtcatctgggcgccc
ctaatccaggctcccctccaggctgctgctgccaccacctcagtggccattgcactgaca
catcatccccatctcccaccaacactcttcagacctccagtctctgttctcagttccctc
aaggacccatccaccagacttcgaaagttccaaccattcgttccttcatccacagcacct
ggctcctctggagactctctatctagcacaccctctaagctgcactctggggtggacatg
ccattgcttgccgcctttcgtgctcaccatatgacatctggttctgggacagttggctca
acaagacaaggatcaggcttgggaggccaacgtggaaataatgggactgggtctgtgtcc
agtgaaggggggactaatgtattcccttttggtccacactcatcctctgtttctccctct
tctagtatggcacaacttcacccacaaccacagtatcaacaaccctttcgatccagcacc
ccacccctttcgaatctctttcaccaatcacctgtaggcggaagcacaggatcaggccta
agtggaggagcaattggagcatgtgggggtgctacaggttggtcttcaggaggcacagct
ggaggttctgttgaaggagcctctggtggagactcttcttgggctggggaggacttcaca
actggtatagcagacattacttctagggagcgcttcgacttgaaaggagcaactgaagga
tcattacacggaaatccgggggaaatactcggtgcaggatcagagagctcagtgggagct
gcttgtggtcagttcacgggtacaacatcaggagcatcagggttaggtgtcacttgtggt
ttaatgcaggacaaaaccaagagattactagaggaaacttctagagggtcaattgaaaga
gtctccaggggatcaatgagtgggacttcacaagaatcactgttacttacaaaccctggg
ggatcatttgggaaggccagcgatggttcatctgcatctgtttttgatatagcctgtggg
ggaacatttggaggagtttctgttgaaatgtcagtggggaattcaacagcattgtttggg
aagtcttccactggatcagcaagcagccatacaggaggagcctcaaatgagcctggagaa
accacaacaggaggatacactggtagaatgacaggatgtgcggtaggaacccaggtggca
acattttcaactttacctggtttaccttcaagtggaattacaacaggacttgttgggtcc
tctttttgtcagagtcctttatctaccagtccatccaacataatgtctagtcagattctc
ccaaaccaaccacatcctaagtcgcttcagcagtttgctggaggaggtaggactaccagt
ggcataaacctcttccaatcaccatcacaaggctcaccatcttgtgttagggggcaacaa
actcagttgcctgctactggttccccaccatccgtcagccactttagcttggcaggcctt
cagtctggctgcttgcctcaccagatgtcactggagaagtctgcattggcttcattggct
cagtatggttcagcaaacgcctctccttgccttaccccagtagcacggagtcctacagta
caaagtccagtggcaggcaggacttttcaatacagcgacccttcaagtattgcaggatcc
cacagttctttgctcatgccccagtctcctctcctttcacagcttcccagcctgccacaa
gcatcagggagagattctcctttagctccattttctgaggacctaaaaagtttatccagc
tcacacccatctttaccccaggaggtggcccaggccctgagccaccaaactacttgctcc
tctgtggaatattatccctcaccattttcctcaccaactcttgtgcccaaaccctgtagc
tcaatatcagggcacatgactcctccaaagcaggagtcgatggggaaccctaacctgact
cagtcccctagatcatctccggtacctcctccacagaggggctctggtgcctacttgtca
gatctagaacctcaaactgctcgttctaaacttccttccaatttgtga
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