Xiphophorus maculatus (southern platyfish): 102230135
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Entry
102230135 CDS
T02923
Symbol
ttf2
Name
(RefSeq) transcription termination factor 2 isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102230135 (ttf2)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102230135 (ttf2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Zn_ribbon_GRF
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
102230135
NCBI-ProteinID:
XP_023193346
Ensembl:
ENSXMAG00000014772
UniProt:
M4AK21
LinkDB
All DBs
Position
7:complement(6523420..6535337)
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AA seq
1128 aa
AA seq
DB search
MEIVKCDSHGSVCMLKTGVKEGPNKGKSFYICIDKQGCDFTQQASIAPSHCLHHEESVVE
LQALSYSQQQQSHRLYYRCAVGKREGQRWCGNVPWTAQEKERRTPLTDSQLQPSCLPRVR
NPFKAPDKTDKPSERRRMQSGGCEEKEGEKKTGRASHNAEGRQRSQKENTEALGAEERKS
SAPETYQGKLLPAGMKVKKRISSEESKSKADDVDRTAVRTQDKAGKSSAEEGESEKTIST
RDIEKISQMCPDLLKNIPQEATNSQTSSLSQNEPTAEKSVAESVPGRSSQSSRGADCAAS
AAVKTKTHQEEEDDDVVLVSVKPAARQTPPASSTVQKTITSFPGFQSAAQVGDPKGMHCL
LSAQLQQKKATLSSVNMAALPDKGERLRLQVKQLEDALESLSLAAASQPEPAEESGSGGS
AAGSARPVVNPFSRPGGTVLLPSAPVPGPVRHQASGSSVGIQLSQGNAQTFGADLQMHPY
YGGRMTNERLLEVKNATCEAIDHLHKSLESCPDPEDEASDPRGIKVPLLAHQRRALAWLL
WREAQNPCGGILADDMGLGKTLTMIALMLTKKMEAKKEGEKKEEKKLDSWISRSDSSIVS
SKGTLVICPASLIHHWKKEIERHVKTGRMSVYLYHGPSRERSARALADYDVVVTTYSLVS
KEILVEKEDADNPGKDPDHVPSRSGPLLRVTWARVILDEAHNIKNPKVQTSMAVCQLRAR
ARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEYKLWKAQVDNGSSRGRERLNILTKTLLLR
RTKDQLDSMGKPLVSLPKRTCEVHQLKLSEDEQAVYDVVFAQSRSTLQNYLKRHEEKDLD
KGNTSSVNPFDKVAQEFGVSQAGPARSGSRQASSTVHILSLLLRLRQCCCHISLLKKTLD
SSELQGDGIVLSLEEQLNALSLSSTPSPSGPDPKDTVALNGTRFPSQLFEETSESTKISA
ITSELMAIKEKSDNQKSVIVSQWTSMLNIIAVHLRRMGLTYGVIDGTVNPKRRMDLVEEF
NTNPRGPQVMLVSLCAGGVGLNLIGGNHLFLIDMHWNPALEDQACDRIYRVGQRKDVTIH
RFVCEGTVEDKIATLQTKKKELAQNVLSGTGSTVSKLSLADLKIIFGV
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagttaaatgtgattcacacggtagtgtgtgtatgctaaaaaccggtgtgaaa
gagggaccaaataaaggcaagagcttctatatttgcattgacaagcagggctgtgatttc
acccagcaggccagtatcgctccttcccactgtctgcatcacgaagagtcagtggtggag
ctgcaggcgctcagctacagtcaacagcagcagagccaccgactctactacagatgtgct
gtcgggaaaagagaaggtcagagatggtgtggaaacgtgccctggactgctcaagaaaaa
gaaaggagaacccctctaactgactcccagctgcagccatcctgcctcccacgtgtcaga
aatccctttaaagctcccgacaagacggacaaaccttcggagcggagacgcatgcagagc
ggtgggtgtgaagagaaagaaggggagaagaaaactgggagagcaagtcataacgcagaa
ggaagacaacgctctcagaaggaaaatacggaggccctaggcgcagaggaaagaaagtcg
agcgcacctgaaacatatcaaggtaagctgctcccagcaggaatgaaggtaaagaagagg
atttcaagtgaggaaagcaagtccaaagctgacgacgttgatagaacagcagttaggacg
caagacaaggctgggaaaagttctgcagaggagggagagtcagaaaaaaccatttccact
cgagacattgagaaaatcagtcaaatgtgccccgacctactcaaaaatataccacaggaa
gcaaccaatagtcaaacctcttccttgagtcagaatgagcccacagcggagaagagcgtt
gctgaatctgtccccggcagaagcagccagtcgtcaagaggagccgattgtgccgcttca
gcggctgttaagaccaagacccaccaagaagaggaggatgacgacgtagttttggtttca
gtgaaaccggcggctcgccaaacccccccggcttcttctaccgtccaaaagacgatcacc
agctttccagggtttcagtcggccgcccaggtgggcgacccaaaggggatgcactgtctg
ctcagtgcccagcttcaacagaagaaggccacgctgtcttcggtgaacatggcggctctg
ccagataaaggagagaggctgagattacaggttaaacagctggaggacgctctggagtct
ctaagcctcgctgctgcttctcagcccgaacccgcggaggagtccgggagcggcggctct
gctgccggctccgctcggcccgttgtcaatccattcagcaggccgggcggaaccgtcctg
ctcccctctgctccagtaccagggccggtccggcaccaagcttccggcagctctgtgggg
attcaactgagccagggaaatgctcaaacctttggagcagatctccaaatgcacccttat
tatggcggcaggatgacaaatgagcgcctgctggaggtgaagaacgccacctgcgaggcc
atcgaccatcttcacaaatctctggagtcgtgtccggatcccgaggacgaagcttcagat
cccagaggcatcaaggtgccgctcctggcccatcagaggagagctttagcctggctgctc
tggagggaagctcagaatccatgtggaggaattctggctgacgacatgggcttaggcaaa
acactgaccatgatcgctctcatgctgacaaaaaagatggaggccaaaaaagaaggagaa
aagaaggaagagaagaagctggattcctggatctctagaagcgattccagcattgtgtct
tctaaaggcactctggtcatctgtcccgcctccctgattcaccactggaagaaggagatt
gagcggcatgtcaagacgggcaggatgtcggtgtatctgtaccacggtcccagccgggag
agaagcgccagagcactggcagattacgacgtggtcgtgaccacatacagtttggtctct
aaggagattcttgtcgaaaaggaagatgctgataatcccggcaaagatcccgatcatgtg
ccgtcacgttcaggccctctactgcgagtgacctgggcccgtgtgattctggacgaagcc
cacaacattaaaaaccccaaagtgcagacctccatggccgtctgccagctgagagcccgc
gcccgctgggctgtcaccgggacccccatccagaacaacctgctggacatgtactctctg
ctgaaattcttgcgttgttctccgttcgacgagtacaagctgtggaaagctcaggtggac
aacggctccagcaggggcagggagagactcaacatcctgaccaaaactctgctgctgcga
cgcaccaaagatcagctggactccatgggaaaaccgctggtgtctcttccgaagcggacc
tgcgaagtgcatcagctcaaactctctgaggacgagcaggctgtgtacgatgtggtgttc
gctcagtccaggtctactctgcagaactatctgaagagacatgaagagaaggatttggac
aagggaaacacgtccagcgtcaatccgtttgataaagtggcccaagagttcggtgtgtcc
caggctggccctgccaggtcgggctctcgccaggcatccagcaccgttcacatcctctct
ctgctgctgcgcctcagacagtgctgctgccacatctctcttcttaaaaagacgttggac
tcgtctgagctgcagggtgacgggatcgtactgtcgctggaggagcagctgaacgctctg
tcgctctcctcgaccccgtcgccatcgggccctgaccccaaagacaccgtggctctgaac
ggcacccgctttccctcacagctgtttgaggagaccagtgaaagcaccaagatttctgcg
atcacatctgagctcatggcgataaaagagaagagtgacaatcagaaaagcgtgatcgtg
tctcagtggaccagcatgctcaacatcatagcagttcatctgcggcggatgggcttgact
tacggggtcatcgacggcaccgtgaaccccaaacggcgcatggacctggtggaagagttc
aacacgaaccctagaggacctcaggttatgctggtttctctttgtgctggtggggttgga
ctcaaccttattggagggaatcatctcttcctcattgacatgcactggaatccagccttg
gaggatcaggcctgtgaccgaatctatagagtaggacaacgtaaagacgtcaccattcac
aggtttgtgtgtgaaggaaccgtagaggacaagattgcaacgctgcagacgaagaagaaa
gagctggcccagaatgtgctttcaggaacaggaagcacagtctctaaactctcattggcc
gatctcaaaataatttttggtgtttag
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