Xiphophorus maculatus (southern platyfish): 102230267
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Entry
102230267 CDS
T02923
Symbol
sox21
Name
(RefSeq) transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102230267 (sox21)
Transcription factors [BR:
xma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102230267 (sox21)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102230267
NCBI-ProteinID:
XP_005799387
Ensembl:
ENSXMAG00000019573
UniProt:
M4AYS5
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All DBs
Position
7:complement(15198932..15204059)
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AA seq
248 aa
AA seq
DB search
MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFSFPVPYNLGEHDALKVSGLSAGALSDSV
IGNPDKAAAAAAAAAARVFFNPSMSANPYSFFDLGSKMTELSPPSFPYASPLGYPPGGAA
AFTGTGGVGGGTHTHTHTHPSPGNPGYMIPCNCTAWPSAGLQPPLAYILLPGMGKPQLEP
YPAYAAAL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccaatggatcacgtcaaacgcccgatgaacgctttcatggtctggtccaga
gcccagcgcaggaaaatggctcaggagaacccgaagatgcacaactccgagatcagcaag
cggctgggagcggagtggaaacttctcacggagtccgagaagaggccgttcatcgacgaa
gccaagcggctcagggcgatgcacatgaaggagcatccagactacaagtacagaccgagg
cggaagcccaagactttgatgaaaaaagataagttttccttcccggtgccctataatctt
ggggagcacgacgcgctcaaagttagcggactttccgcaggagcgctctccgactccgtc
atcgggaacccggacaaggctgcggcggccgcggcggccgcggctgcgagggtcttcttc
aacccgtccatgtcagcgaacccgtactcgttttttgacctgggatccaagatgaccgag
ctttccccgccttcctttccttacgcctctcctttgggttacccgccgggaggggcggcg
gcgtttaccgggactggcggcgtgggcggtgggacacacacccacactcacacgcacccg
tcaccgggtaacccggggtacatgatcccgtgtaactgtacggcctggccctcggcggga
ctccagccgcccttagcctacatcttgctgcccgggatggggaaacctcagcttgaacct
taccctgcatatgctgcggcgttatga
DBGET
integrated database retrieval system
