Xiphophorus maculatus (southern platyfish): 102230363
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Entry
102230363 CDS
T02923
Symbol
frem3
Name
(RefSeq) FRAS1-related extracellular matrix protein 3
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
102230363 (frem3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
UL40
DUF4381
Motif
Other DBs
NCBI-GeneID:
102230363
NCBI-ProteinID:
XP_023190178
Ensembl:
ENSXMAG00000009662
UniProt:
M4A5E9
LinkDB
All DBs
Position
5:complement(3876008..3912755)
Genome browser
AA seq
3140 aa
AA seq
DB search
MAGCLQSSQLCKKWAFLRCLLLTLCLSSCLISVFSEPFDPSHLYYHKSGPNEDDIIIANN
GIRVPFGRSVFLDPGKDLITEVQPGDRCQITVLDNDPLTQKPGMLTPKRFPCSFGANEVK
YTHFGSRSPSKDRVKMQLRYDSHTDTVIVPFMLEVEVVFQQLEILLRNMPLNVEKLNGDS
SLIDKKALEFSFEDGVTQCKITTLVGAGGLPRYGTLLNSPPNGQLVDCDEFVNLGIHYKH
TAKTKSPNRDYIPMMVELQDIEGNTIMQEHFQTMVRIREGAENTAPKPSFVAMMMMEVDQ
FVMTAITSDMLAAEDVESDPDNLIFNITSPLSPQQGYIISTDDQNLPITSFNQRDIRNLK
IAYKPPSEDSDEERIFQLEFEIIDTDGAVSDPFAFMIVVKPMNTLAPVATKNTGQLLFEG
QSRALSSSQNLEISDEDNLEDVRITVVDGLKHGDLTVLGLRRKFFTPSDLDAGIVVYQHD
GSDTYSDNIILRMTDGRNEVEFLFPITIVPTDDEPPIINANTGLVLFKKEMMQISPFILS
ATDIDSEDSFIRFILEAPYSTVGELLLRQVEPPAEPSQWKFSETDEMFEQVVTEWSQKDI
LDGKLFYRHVGPHSTTTVTDLFVFRVQDDNNPPNQSGEHTFTIKILPVDDLPPVLFPGTT
LHMTVQEYELTFFRKKFLCYTDLDSDDRDLKYTITKVPTNTDENNLAPLGKIVLTDSPET
VITEFTQAQVNHHKVAYKPPDQELGITPKVAQFTFIVEDTAGNSADGLFTIFLQPVDNKP
PEIINTGFTVKETSTFIISSKELYATDTDTDDENIIFTLTQAPKYGQLQYLGIYMSNGET
FNLEDIANGLLTYLHGGEESLSDIIKLSVSDGFHEVPITVRVTIEPVDDETPTIMLPAGV
LGAAIDVLENGATEITSNVIQGRDKDTDDLMLAFIVEEPPRLGEILVNGAPAERFTQEDI
INGVVVYAHTSGEIGPVKVHDSFNLTLSDMSDQWVVGGNKVQGVTVHVTILPVDSIPPVV
SVGGQFVVMEGEKNVITISHIQAEDVDTNNDDILCTIIVQPTSGYVENISPATGSEKSRA
GTAITAFTIKDISLGHIYYVQSIHKGVEPVEDQFTFRCSDGINFSERHFLNIVIIPANDE
KPEIFTREFLVMEGMHLVIDTPVLNAADADIPEDELFFEIIKSPKHGAIIQQLSTGTVPV
ERFSLEQIKEAANIVYEHDDSETKEDSFDIRLSDGKHAVEKTVLIIVIPVDDETPRMAIN
DGLDVEIGETKVISNRALKATDLDSEDRELTYVLRYGPGQGYLQRINKFGNVLGNITLGM
NFTQDEIDKQRILYVHTGQEGIRDLLKFDVTDGINPLIDRYFYINIGSIDMVFPDVINKG
VTLKEGGKVTLTTDLLSTSDINSPDEYLSFSITRAPSRGHLECTDLPGVPISTFTQLQLA
GNKIYYIHTSDDEVKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVITVHKLVVEEGET
KLITPFELTAEDRDTPDNLLRFTVTQVPVHGQLLFNNSRPITSFTKQNLNENLISYKHDG
TETNEDSFSFIVTDGTHTDFYVFPDTVYATRKPQMMTIHINTVDNGVPQIVVNKAAASLR
VLQTGHLGFVFTSKVLRSEDRDSPQKVLKYSVSEEPLHGFIMNVELGNHSINTFTQAEIN
DMKICYVLLDGSNATSDIFYFTVEDNGGNKLKPQPFRLNWAWISLEREYYLVDEDAKFLE
VTLKRRGFLGETSFVSIGTKDGSAEKDKDFRGRAQKQVQFNPGQTTATWRVKIFTDQEFE
TSETFEIQLSDPVMAVLEYPDAATVEIVDPGDESTVFIPQAEFKIEEDIGELLVPVMRSG
DASQELMVVCFTQQGTATGTIPTTVLSYSDYITRAEDHTSVLRFDKDEREKVCRIIIIDD
SLYEEEESFNVSLSMPMGGQLGASFPSTKVTILADSDDEPSLYFGEPEYVVEESSGYVEV
KVWRTGTDLSKIATVTVRSRKSDPVSAEAGLDYVGISRNLDFAPGVTMQTFRVTILDDLG
QPKLEGPETFDLVLRMPMNAVLGEPSKTTITINDTVTDLPKVQFKEGSYKVDESDGEVSA
MVYRSGDISLRSTVRCYTRQGSAQVMMDYSERPNTDASIITFLPGESEKPCVVGLMDDSV
HEEDEEFRLVLGSPKSKSPYGASIGEQKDALVTITDEKDKPIIRFSEIKYSVREPQVKGE
VARVKIPILRFGDASKLSVVRIHTKDGSATSGEDYNPLSEDVEFKEGEKEHFVEIEILYD
GHREMREAFTVHMKPDDNMVAEIQMNKAIVYIEEMDSVADVTFPAVPHVVSLLMYDDTAK
TRDRPSPPNGYPVVCVTACNPKYQDFDKTGSICSAENINDTLTQYRWLISAPTGPDGVTS
PMREVDTNTFFTNTKSITLDSIYFQAGSRVQCAARAFNTNGDAGLELSSPIFVISTEEGM
CQPHIPGTVGAEPFSAKIRYTGPDDPDFPNLIKLTINMPHMDGMLPVISTRPLSNFELTL
SPDGTRVGNHRCSNLLDFNEVQTGYGFITDATKNPEIIGETSPYQYSTAMRSANSLRFYR
NLNLEACLWEFTSYYDMSELLNDCGGSIGTDGQVLNLVQSFVTLRVPLFVSYVFHSPVAV
GGWQHFDLQSELKLTFVYDTAILWQDGIGSPPEAELQGAMYPTSMRINEEGRLVVNFKTE
ARFRGQFVMSHPGTSVSSMVMCADIPGLTFTLALVRTEPTYNQPMQQWSFVSDFAVRDYS
GTYTVKLVPCISSPNGEFSIPPVCHPRESLTFDMDIRFQQVSDPVAAEFSLNTQMFLLSK
KELWLSDGSMGFGEGTDAAFSEGSTIYGRVMVDPVQNLGDSFSCSIEKVFLCTGADGYVP
KYNPTNREYGCLADAPSLLYRFKILDKAQPETQASAFGDVSFKAKLAQDASGAQTLVTQP
GSDGFMLSSSPLFQVAAGREWFIHTIYTLRSRENANRHIGKRSVEYLQHSVSSVAQPHVS
DAGGRQRRAAPALSGPAVAQDIGIKNNRGTNIQHIALDRSDRMVVSQRQPWSPSGDRLLE
RPLLESSGREPADTSFLPMLVGIAALILLICLIAIVVILLLRHKRKEKEAQFPPYATSSS
SAYSGYRPAGMWSSSDSSEV
NT seq
9423 nt
NT seq
+upstream
nt +downstream
nt
atggctggttgtctgcaaagttcccaactttgcaaaaagtgggcatttcttagatgcctg
ctcttgactctgtgtctcagttcatgtcttatttcagtattttctgagccctttgatccc
agtcacctctattaccacaagtctggacctaatgaagacgacatcatcattgctaataat
gggatcagggtgcctttcgggagatcagtgtttttggaccctgggaaagacctgattaca
gaagtgcagcccggcgaccgctgccaaataacagttttggacaatgacccgctgactcag
aaacctgggatgctgacccccaaaaggtttccctgttcatttggagccaacgaagtgaaa
tacactcactttggatctcggagccccagcaaggaccgtgtaaagatgcagcttcgctat
gattcccacacagatacggttatcgtcccattcatgttagaagtggaggtggttttccag
cagctcgagatcctcctcaggaatatgcctcttaatgtggagaaactcaatggggacagc
agcctgattgacaaaaaggctctggagttttcctttgaggatggggtcacgcagtgtaag
atcaccacgctggttggcgccggaggcctccccaggtatggcacgcttttgaatagtccc
cccaatggccaactggttgattgtgatgagtttgtaaatctgggtattcactacaaacac
actgctaaaaccaaatcaccgaacagagactatattccaatgatggtagagctgcaggat
attgagggcaacacaataatgcaggagcacttccaaacaatggtcagaatcagagaaggt
gcagaaaacactgctcctaaacccagctttgtagcaatgatgatgatggaggttgatcag
tttgtgatgacagctattacaagcgacatgctagcagctgaagatgttgaatctgatcca
gacaatttgattttcaatattacttcacctctgagccctcagcagggttacataatcagc
acagatgatcagaatctccccattacttccttcaaccagagggacatcagaaatttgaaa
atagcatacaagcctccctcagaggactcagatgaagagaggattttccaattagagttt
gaaattatagatactgatggcgcagtgtctgacccatttgcttttatgatagtggtgaaa
cctatgaacaccttagctccggttgcaaccaaaaatacaggtcagctactgtttgaaggc
caatcccgagctctttccagctcccagaatttggaaatcagtgatgaggataacctggaa
gatgtaaggattaccgttgttgatggtctgaaacacggagacctgactgtgctcggcttg
cgcaggaaattttttacaccgtctgatctggacgctggcattgttgtgtaccagcatgac
ggcagcgacacctacagtgataacattattttgagaatgacagatggaaggaacgaagtg
gaatttttgtttcccatcactattgttcctactgatgacgagcccccaataatcaacgcc
aacactggtctggtgctgtttaagaaagaaatgatgcagatctctcccttcatcctgagt
gccacagatatagactcagaagactcatttataaggttcattctggaagcaccgtactcc
actgtgggggagctcttactcaggcaagttgagccacccgctgagccctctcagtggaag
ttcagtgagacagatgagatgtttgagcaggtggtaactgagtggtctcagaaggatatt
cttgatggaaagctgttctatcgacatgtcggacctcacagcaccaccacagtgacggat
ttgtttgtgtttcgtgtccaggatgacaacaacccccctaatcagtcaggtgagcacacg
ttcaccattaaaatcctccctgtcgatgaccttcccccagtgctgttcccaggcaccacg
cttcatatgactgtccaggaatatgagctcactttcttcaggaagaaattcttgtgttat
actgatctagattcagacgacagagacctgaagtacacaatcactaaagtaccaaccaat
accgatgagaacaatctagcccccttgggtaagattgtactgactgacagccctgaaact
gtaattacagagtttacacaagcccaggttaatcaccacaaagtagcttacaagcctcca
gaccaggaactgggcatcactccaaaagtcgctcagttcacattcattgtggaggacaca
gctggtaactcagcagatggcttattcacaattttcctccagccagttgacaacaaaccc
ccagaaattatcaacacaggatttactgtcaaggaaacaagtacttttataattagcagc
aaggagttgtacgccactgacacagatacagatgatgaaaatatcatcttcactttgacc
caagctcctaaatacggacagctgcaatatttaggcatttacatgtcaaatggtgaaacg
ttcaatctcgaagatattgcaaacggcctcttgacttatctccatggtggagaggaatct
ctcagtgatataatcaaactttctgtgagtgatggtttccatgaggtccccattactgtg
agggtaactatagagccagttgacgacgagaccccgactatcatgctcccagctggcgtg
ttgggggccgccatcgatgtgttggagaacggagcaacagagatcaccagtaacgtcatt
caaggacgtgataaagacacggatgacctcatgctggctttcattgttgaggaacctcca
aggctgggcgaaattctagttaacggcgctccagctgagaggttcacccaggaggacatc
atcaacggagtggtggtgtatgctcacacttctggtgaaatcggtccagtcaaagtacat
gattccttcaacctaactctttctgatatgtctgatcagtgggttgtaggtggcaacaaa
gtccagggtgtgactgttcatgtgaccatccttcctgttgatagcattccacctgttgtc
agtgttgggggacaatttgttgtgatggaaggagagaagaatgtcattacgataagtcat
attcaagctgaggatgttgacaccaacaatgatgacatcctatgcaccattattgtccaa
ccaacatctggttatgtagaaaacatctccccagccacaggatctgagaaatcaagagct
ggtactgccatcactgcctttaccattaaagatatttcgcttggtcacatctactacgtc
caaagcatccacaaaggagttgaacctgtggaggatcagttcacattccgctgctccgat
ggcatcaacttctctgaacgccacttcctcaacattgtcatcattccggccaatgatgag
aaaccagagatcttcacacgtgagtttctggtaatggaaggcatgcacttagtgattgac
actccggttttgaacgcagctgatgctgacatcccagaggacgagctgttttttgagatc
atcaaaagccccaagcatggggcgataatccaacagctaagcacaggcactgtccctgta
gaaaggttcagcttagaacagatcaaagaagcagccaacattgtctatgaacatgatgac
tctgagaccaaagaggacagttttgacatcaggctttccgacggaaaacatgcagtagag
aaaacagttctcatcattgttattcctgttgatgatgagacaccaagaatggctataaat
gatggccttgatgttgagattggggagacaaaggtaatcagtaacagggctttaaaagca
acagacctcgactctgaagatagagaactaacatatgttctgcgatatggtcctgggcaa
ggctaccttcagcgtataaacaaatttggtaatgttttgggaaacataaccctggggatg
aacttcacacaggatgaaatagacaagcaacgaattctgtatgtacacacaggccaggag
ggcattcgagacttgctgaaatttgacgtcacagatggcatcaatcctcttattgatcgc
tacttttacatcaacattggcagcattgacatggttttcccagatgtaatcaacaaaggt
gtgacactcaaagaagggggaaaagtaacactcaccactgacctccttagcacatctgac
atcaacagtcctgatgagtatctcagctttagcatcacaagagcacccagccgggggcat
ttagagtgcactgacctcccaggtgttcccatttccaccttcacccaactgcagctggct
ggcaacaagatctactacatccacacctcagacgatgaggtcaaaatggatagctttgag
tttgaggtgacagatggttacaatcccgtcttccgaaccttcagagtgtccatcactgat
gtagataacaaaaaacctgtcatcactgtgcacaagctggttgtggaggagggagaaacc
aaactcattacaccatttgagctgacggctgaggatcgggacacgcctgacaacctgctc
cgcttcacagtcacgcaggtgcccgtgcacggccagctgctcttcaacaacagccggcca
attacatccttcaccaagcagaacctgaatgagaaccttatcagctacaaacatgatggt
acagagaccaacgaggacagcttttccttcatagtcacggacggcactcacacagacttt
tacgtttttcctgatacggtgtacgcgactcgcaagcctcaaatgatgaccatccacatc
aacacggtggataatggtgtgccccagattgtggtcaacaaagctgctgcttcattgaga
gtcctccaaacgggacacctgggcttcgtttttaccagcaaggtccttagatcagaggac
agagacagcccccagaaggtcctgaagtacagcgtgtctgaggagccgctgcatggcttc
atcatgaacgtggagctgggcaatcatagcatcaacaccttcacacaagctgaaatcaac
gacatgaagatctgttatgtgctgttggatggtagcaacgccacaagtgatatcttctat
ttcacagtcgaggacaatggtggaaacaaactcaagccgcagccgttccgtcttaactgg
gcctggatctctctggagcgggaatactacttagtggatgaagacgccaaattcctggag
gtcactctgaaacgcagaggcttcctgggggaaacctcttttgtcagtattggaacaaaa
gatggctcagctgagaaggacaaagatttccgtggcagagctcagaagcaagtccagttc
aacccaggccagacgacagcgacctggagggtgaagatcttcactgaccaggagtttgag
acttcggagacctttgagattcagctgtcggacccggtcatggcggtgctggagtaccct
gatgctgcaacggtggagattgtagatcctggagatgaatcaacagttttcattccacaa
gcagaattcaagatagaggaggatattggggagctactagtgccagtcatgcgatcaggc
gatgccagccaggaacttatggttgtctgtttcactcagcaaggtaccgccactggcacc
atacccaccactgtcctctcctactccgactacatcacccgtgctgaggaccacaccagt
gtgctgcgcttcgacaaggacgagagagaaaaagtttgccgaatcatcattattgatgac
tccctttatgaggaagaggagagctttaacgtcagcctcagtatgccgatgggcggtcag
ctgggggccagtttcccatccaccaaagtcacaattttggcagacagcgatgatgagcct
tcgctgtactttggggagcctgaatatgttgtggaggagagttcaggctatgtggaggtg
aaggtctggaggacaggtactgacctgtccaaaatcgccacggttacggttcgctccaga
aagagcgatcctgtttctgcagaagccggactcgactatgtcggcattagtcgcaacctg
gactttgctccaggtgtcaccatgcagacatttagggtgaccatcttggatgatctgggt
cagccaaaactggaggggccagagacctttgaccttgtgctgaggatgcccatgaatgct
gtactaggagaaccgagcaagacgaccatcaccatcaacgacactgtcactgacttgccg
aaggttcagtttaaggaggggagctacaaggtggatgaatctgacggcgaagtgagcgcg
atggtgtaccgcagcggagacatcagcctcagatccacagtgcgctgctacacccggcag
ggatccgctcaggttatgatggactacagcgagaggcccaacactgacgcctccatcatc
acctttctgccaggcgagtcggagaagccgtgtgtggttggcctgatggatgactcagtc
catgaggaagatgaggagttccgcttggtgctggggagtccgaagagcaaatccccgtac
ggagcctcaatcggggagcagaaggacgcgctggtcaccatcacagacgagaaagacaag
cccatcatccgtttttctgagatcaaatacagcgtgcgagaacctcaggtcaaaggtgag
gtggccagagtgaagatccccatcttgcgttttggagacgcatcaaaactgtcagtagtg
cggatacacaccaaggatggctctgccacgtctggagaggattacaacccactgtctgag
gatgtggagttcaaggaaggtgagaaggaacattttgttgaaatcgagatcctgtatgac
ggtcacagagagatgagagaggccttcacggttcacatgaagcctgacgacaacatggtg
gctgaaatacagatgaacaaggcgatagtgtacattgaggagatggacagcgtcgcagat
gtcacgttccctgcagtgcctcatgtggtgtctctcctcatgtacgacgacacggccaaa
acccgagaccggcccagcccacccaacggataccctgttgtgtgtgtgacggcctgcaac
ccaaagtaccaggactttgataaaacgggttccatctgctctgcagagaacatcaatgac
actttgacccagtaccgctggttgatcagcgctcctaccggaccagacggagtgaccagt
cccatgagggaggtggacaccaacaccttcttcaccaacaccaaatccatcaccttggac
tcaatctactttcaagctggctccagagttcagtgcgcagcaagagccttcaacaccaac
ggagacgctggcttagaactgtccagtcccatctttgttatcagtacggaggaaggaatg
tgtcagcctcacatcccgggaactgtcggagcagaacccttctctgcgaagatccgctac
acgggtccagatgatccagactttcccaaccttatcaaactgaccatcaacatgccgcac
atggatggaatgctcccagtgatctccaccaggcctttgtctaactttgagctcacgctg
agtccggacggcacacgcgtggggaaccaccgctgctccaacctgctggactttaatgag
gtccaaactggttacggcttcatcacagatgcaacaaagaaccctgaaatcatcggggag
acgtcgccgtaccagtacagcaccgccatgcgttcagccaattcactgcgcttctacagg
aacctgaacctggaagcctgcctctgggaattcaccagctactacgacatgtctgagctg
ctcaacgactgcggcggttccatcggcactgacggacaggtgttgaacctggtccagtct
ttcgtcactttgcgggttcctctgtttgtgtcctatgtcttccactcccctgtcgctgtt
ggaggctggcagcactttgacctgcagtcggagcttaagctcaccttcgtttatgatacg
gccattctgtggcaggacggcatcggcagcccacctgaagctgaactacaaggagccatg
tatcccaccagcatgcgcataaatgaggagggacgcctggtggtcaacttcaagaccgag
gctcgcttcaggggacagtttgttatgtctcatccaggaaccagtgtgtcatccatggta
atgtgtgctgacattcccggactgacctttaccctcgctttggtcagaactgaaccgacc
tacaaccagcccatgcagcagtggagtttcgtctcagattttgcagtgcgggactactct
gggacctacacagtgaagctggttccctgcatctcttcgcccaatggggagttcagcatc
cctcctgtctgccacccgagagagtcgctcacttttgacatggacattcgcttccagcag
gtgagcgacccagtggcggctgaatttagtctaaacactcagatgttcctgctgtctaag
aaagagctctggttgtctgacggctccatgggctttggagaaggaactgatgctgctttt
tcagaaggctccactatttacggccgtgttatggtagatcctgtgcagaacctgggcgac
tccttctcctgcagcattgagaaggtcttcctctgcactggggcggatggatacgtcccc
aagtacaaccctaccaacagggagtatggctgcctggcagacgctccctctctgctctac
agattcaagatcttggacaaagcccagccagagactcaagcttcagcatttggggacgtt
tcttttaaggccaaactggcccaagatgcatctggagctcaaacgttggtcacacaacca
gggtcagacggtttcatgctctcttcttcaccactttttcaggtggctgctggtcgggaa
tggttcatccacactatctacaccctccgctccagagagaatgcgaaccgtcacattggc
aaacgcagcgtggagtacctccaacacagcgtctcttcggtcgcgcagcctcacgtctcg
gacgcaggcggtcgccaacgcagggccgccccggcgctctccggtcctgctgtggcccag
gacattggcatcaaaaacaaccggggcaccaacatccagcacatcgctctggaccgatct
gaccgcatggtggtgagccagcggcaaccctggtcgcccagcggtgaccgcctcctggag
cgccccctgctggagagctcgggcagagagccggctgacacctccttcctgcccatgctg
gtgggaatcgcagctctgatcttgctcatctgcctcatcgccatcgttgtcattctgctg
ctgaggcacaagaggaaggaaaaggaagctcagttccctccgtatgccacttcctcctca
tctgcctactcaggctacaggcctgcaggcatgtggagcagttcagacagctctgaggtc
taa
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integrated database retrieval system
