Xiphophorus maculatus (southern platyfish): 102230405
Help
Entry
102230405 CDS
T02923
Symbol
mkrn1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102230405 (mkrn1)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102230405 (mkrn1)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102230405 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf_CCCH_4
zf-CCCH
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-CCCH_9
zf-RING_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
102230405
NCBI-ProteinID:
XP_005808194
Ensembl:
ENSXMAG00000005086
LinkDB
All DBs
Position
17:19109317..19119674
Genome browser
AA seq
437 aa
AA seq
DB search
MAEAAAASTVAPSVTGGWTKHVTCRYFMHGLCKEGDSCRYSHDLSSSKPAAMICKFFQKG
NCVFGDRCRFEHSKPIKKEELPNTQTLPLASVSQADPADPTDPADPEPRGMSPGSEAQDW
VNAAEFVPGQPYCGRAEPVKVESSAPLIEEFDSDAGPDNKDLRKQLCPYAAVGECRYGVN
CAYLHGDVCDMCGLQVLHPSDSSQRSEHTKACIEAHEKDMEISFAIQRSKDMMCGVCMEV
VFEKSNPSERRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYW
VEDKEDKQKLIQKYKDGMGSKPCRYFDEGRGTCPFGSNCFYKHAFPDGRLEEAQPQRRQT
GSNNRNRSSRRTPLWDIFDERESTDSFDNDDEEMVTFELSEMLLMLLAAGTDDEVTDSED
EWDLFHEELDDFYEIYL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagcagcgtctacggtggctccttcagtaacaggaggttggacaaaa
catgtaacctgcaggtatttcatgcatggtctttgcaaagaaggagacagctgtcgatac
tctcatgatctttcaagcagcaaacctgcagccatgatatgcaagttctttcagaaggga
aactgtgtgtttggagatcgctgcaggtttgagcacagtaaacccataaagaaagaggag
ctgccaaacacccagacgctgccgctggcctctgtctcccaggccgacccagccgaccca
accgacccggctgacccagaacccaggggcatgtcgcctgggtcagaggctcaggactgg
gtcaacgcggcagagtttgttccaggacagccgtactgtggacgagctgagccagtgaaa
gtggagagctcggcccctctcattgaggagtttgacagcgacgcaggcccagacaacaaa
gacctgaggaagcagctctgtccatacgctgctgttggagagtgtcgctacggagtcaac
tgtgcttatctccatggtgacgtgtgtgacatgtgcggcctgcaggttctccaccccagt
gacagttcccagcgctcagagcacaccaaggcgtgcattgaagctcatgagaaagacatg
gagatttcttttgccatccagcgcagtaaggacatgatgtgtggcgtgtgtatggaggtt
gtgtttgagaagtccaacccaagcgaacgtcgttttgggatcctctccaactgcagccac
tgctactgtctgaaatgcattcgcaagtggaggagtgccaagcagttcgagagcaaaatt
atcaagtcctgtccagagtgtcgaatcacatctaactttgtcatcccgagtgagtactgg
gtggaggacaaagaggacaagcagaagctaatccagaaatacaaggatggcatggggagt
aaaccatgtcggtacttcgatgaaggtcgtggaacttgcccttttggctcaaactgcttc
tacaaacacgccttccctgatggacgtctagaggaagctcagccgcagagaagacagact
ggatccaataacaggaaccggagctcgaggcggacgccactgtgggacatctttgacgag
agagaaagcaccgactcgttcgacaacgacgacgaggagatggtgacgttcgagctgagt
gagatgcttctcatgctgcttgctgcaggaaccgacgacgaagtgacggattcagaggac
gaatgggacttgtttcatgaggagctcgacgatttctatgagatttacctatag
DBGET
integrated database retrieval system
